Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq106333 152 4e-32
seq41455 93.3 3e-14
>seq106333
Length=418
Score = 152 bits (168), Expect = 4e-32
Identities = 94/98 (96%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 115588
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 173 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114
Query 115589 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626
|||||||||||||||||||||||| ||||||| |||||
Sbjct 113 AAAACTGATATATTGAGCCATTCGCGGTATCGCCTTAA 76
Score = 152 bits (168), Expect = 4e-32
Identities = 94/98 (96%), Gaps = 2/98 (2%)
Strand=Plus/Minus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114391
|||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 173 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATCTAAGGAACC 114
Query 114392 AAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429
|||||||||||||||||||||||| ||||||| |||||
Sbjct 113 AAAACTGATATATTGAGCCATTCGCGGTATCGCCTTAA 76
Score = 82.4 bits (90), Expect = 6e-11
Identities = 50/52 (96%), Gaps = 1/52 (2%)
Strand=Plus/Minus
Query 115342 TCCGTCGATTGGTTT-GATCTAATAAAAGCACTCATCCCATCACTGGTTAGA 115392
||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 235 TCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGA 184
Score = 82.4 bits (90), Expect = 6e-11
Identities = 50/52 (96%), Gaps = 1/52 (2%)
Strand=Plus/Minus
Query 114145 TCCGTCGATTGGTTT-GATCTAATAAAAGCACTCATCCCATCACTGGTTAGA 114195
||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 235 TCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGA 184
>seq41455
Length=627
Score = 93.3 bits (102), Expect = 3e-14
Identities = 84/101 (83%), Gaps = 5/101 (5%)
Strand=Plus/Minus
Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TA-AGATCTAAGGA 115585
|||||||| |||||||||||||||| ||||||||||||| || | || ||||| || ||
Sbjct 153 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAGTGTGGGTACAGATCCAATGA 94
Query 115586 ACCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 115626
| || | ||||| || ||||||||||| ||| ||| |||||
Sbjct 93 ATCATAGCTGATTTAATGAGCCATTCGCGGTTTCGCCTTAA 53
Score = 93.3 bits (102), Expect = 3e-14
Identities = 84/101 (83%), Gaps = 5/101 (5%)
Strand=Plus/Minus
Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAG--TA-AGATCTAAGGA 114388
|||||||| |||||||||||||||| ||||||||||||| || | || ||||| || ||
Sbjct 153 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAAGTGTGGGTACAGATCCAATGA 94
Query 114389 ACCAAAACTGATATATTGAGCCATTCGTGGTATCGTCTTAA 114429
| || | ||||| || ||||||||||| ||| ||| |||||
Sbjct 93 ATCATAGCTGATTTAATGAGCCATTCGCGGTTTCGCCTTAA 53
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396406630600624
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |