Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq44056 95.1 1e-14
seq45083 84.2 2e-11
seq38975 82.4 7e-11
>seq44056
Length=626226
Score = 95.1 bits (104), Expect = 1e-14
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || || | |||||| || ||||| || || || || ||||| || || ||
Sbjct 244784 ATGCCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTGTGGATGTTGTAGTCT 244843
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| || ||| |||| ||||| || || |||||| || |||||||| ||
Sbjct 244844 GAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGT 244903
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || || || || ||||||||||| ||||| || | || | |||||| | |||
Sbjct 244904 GGGATACCCTCCTTGTCTTGAATTTTGGCTTTGA-CGTTCTCAATGGTGTCACTGGGCTC 244962
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||| || || || | |||||||| || | || |||||||| || |||||
Sbjct 244963 GACCTCAAGGGTGATGGTTTTGCCCGTGTGGGTCTTTACAAAGATCTGCAT 245013
>seq45083
Length=200
Score = 84.2 bits (92), Expect = 2e-11
Identities = 121/168 (72%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCC 45191
|| ||||| || || || ||||||||||| || ||||| || | ||| | ||| ||
Sbjct 168 ACGAGATGGAGAGTAGACTCCTTTTGGATGTTGTAATCACTCAAGGTGCGACCATCCTCA 109
Query 45192 AATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGA 45251
| ||| ||||| ||| | ||||| || || ||||| || || || || || || |||||
Sbjct 108 AGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGTGGGATTCCCTCCTTGTCTTGG 49
Query 45252 ATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAG 45298
|| || |||| || | || | ||| |||||||| || || |||||
Sbjct 48 ATCTTGGCCTTGA-CGTTGTCGATGGTATCGGAAGATTCAACCTCGAG 2
>seq38975
Length=485
Score = 82.4 bits (90), Expect = 7e-11
Identities = 162/236 (69%), Gaps = 4/236 (2%)
Strand=Plus/Minus
Query 45108 TTTATT--CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTAT 45165
|||||| || || || || | | ||| | |||| || ||||||||||| || || |
Sbjct 381 TTTATTGACCACCACGAAGACGGAGCACCAAGTGCAATGTCGATTCCTTTTGAATGTTGT 322
Query 45166 AATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGT 45225
|||| | |||| | || ||||| || ||||| || | ||||||||||| ||||
Sbjct 321 AATCCGAAAGGGTTCTGCCGTCCTCCAACTGCTTTCCAGCAAAGATCAATCGTTGTTGGT 262
Query 45226 CCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAA 45284
| || || || || || |||||||| | | || | | | || | || | || || ||
Sbjct 261 CGGGTGGGATACCCTCCTTATCTTGGA-TCTTCGCCTTAACGTTATCAATAGTATCTGAT 203
Query 45285 GACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || ||||| | |||| || || || || | ||| || || ||||| |||||
Sbjct 202 GATTCTACTTCTAATGTAATGGTCTTTCCAGTCAAAGTCTTGACGAAAATCTGCAT 147
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451237551779520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |