Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= NC_017979.1 Length=43376 Score E Sequences producing significant alignments: (Bits) Value seq38390 91.5 4e-14 >seq38390 Length=1205360 Score = 91.5 bits (100), Expect = 4e-14 Identities = 186/269 (69%), Gaps = 17/269 (6%) Strand=Plus/Minus Query 965 TGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGATTGATGT 1024 ||| |||||||| ||| ||||||| |||| || || || || || | |||||||| Sbjct 764559 TGGGTGTTATGGAAGAGTAGCTCCACGGTCAGGCTTGGCTGCAAAACACTTTATTGATGT 764500 Query 1025 GGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTATTTAATTT 1084 || |||||||| || | | ||| | ||| || || |||||| |||| | ||||| || Sbjct 764499 AGGAGCTGGTGTCATAGGTGAAGATTATAGAGGAAATGTTGGTATTGTACTGTTTAACTT 764440 Query 1085 TAGCGAT-AAGCGTTTTCATATTTCAAGA--GGTGATAGGATTGCTCAGTTAATTTGTGA 1141 | || | || |||| | |||| | |||||| | | ||| ||| | ||||| | Sbjct 764439 TGGCAAAGAAAAGTTTGAAG---TCAAAAAGGGTGATTGAACTGCACAGCTCATTTGC-A 764384 Query 1142 AAAGGCTGTTTTTCCATCCATTCAAATAGTGGA--TTCC----TTAGAGGATTCGGAAAG 1195 || || | ||||| ||||| |||||| || ||| || || ||| | ||||| Sbjct 764383 AACGGATTTTTTT--ATCCAG--AAATAGAAGAAGTTCAAGCTTTGGATGATACCGAAAG 764328 Query 1196 GGGTTCTGCAGGATTTGGGTCTACCGGAA 1224 |||||| | ||| ||||| || || |||| Sbjct 764327 GGGTTCAGGAGGTTTTGGTTCCACTGGAA 764299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 138458432875872