Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_017979.1
Length=43376
Score E
Sequences producing significant alignments: (Bits) Value
seq38390 91.5 4e-14
>seq38390
Length=1205360
Score = 91.5 bits (100), Expect = 4e-14
Identities = 186/269 (69%), Gaps = 17/269 (6%)
Strand=Plus/Minus
Query 965 TGGATGTTATGGTAGAATAGCTCCTAGGTCCGGATTAGCGGCTAAGTTTATGATTGATGT 1024
||| |||||||| ||| ||||||| |||| || || || || || | ||||||||
Sbjct 764559 TGGGTGTTATGGAAGAGTAGCTCCACGGTCAGGCTTGGCTGCAAAACACTTTATTGATGT 764500
Query 1025 GGGTGCTGGTGTTATTGATCCAGACTTTAGGGGGAACGTTGGTGTTGTTTTATTTAATTT 1084
|| |||||||| || | | ||| | ||| || || |||||| |||| | ||||| ||
Sbjct 764499 AGGAGCTGGTGTCATAGGTGAAGATTATAGAGGAAATGTTGGTATTGTACTGTTTAACTT 764440
Query 1085 TAGCGAT-AAGCGTTTTCATATTTCAAGA--GGTGATAGGATTGCTCAGTTAATTTGTGA 1141
| || | || |||| | |||| | |||||| | | ||| ||| | ||||| |
Sbjct 764439 TGGCAAAGAAAAGTTTGAAG---TCAAAAAGGGTGATTGAACTGCACAGCTCATTTGC-A 764384
Query 1142 AAAGGCTGTTTTTCCATCCATTCAAATAGTGGA--TTCC----TTAGAGGATTCGGAAAG 1195
|| || | ||||| ||||| |||||| || ||| || || ||| | |||||
Sbjct 764383 AACGGATTTTTTT--ATCCAG--AAATAGAAGAAGTTCAAGCTTTGGATGATACCGAAAG 764328
Query 1196 GGGTTCTGCAGGATTTGGGTCTACCGGAA 1224
|||||| | ||| ||||| || || ||||
Sbjct 764327 GGGTTCAGGAGGTTTTGGTTCCACTGGAA 764299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 138458432875872
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |