Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq44056 116 3e-21
seq42152 116 3e-21
seq97443 114 1e-20
seq44178 107 2e-18
seq38975 96.9 3e-15
seq68558 95.1 1e-14
seq21918 95.1 1e-14
seq52973 91.5 1e-13
seq43203 91.5 1e-13
seq43693 86.0 5e-12
>seq44056
Length=626226
Score = 116 bits (128), Expect = 3e-21
Identities = 150/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| || ||||| || || ||||| || | || ||| | | |||| |||| ||
Sbjct 244811 TGCAGGGTGGACTCTTTGTGGATGTTGTAGTCTGAGAGAGTGCGGCCATCTTCCAGCTGT 244870
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| || |||||||||| |||||| || || || || || || || || |||||||||||
Sbjct 244871 TTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTTTG 244930
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| || | || | |||||| | || || ||||| |||| |||||||| ||
Sbjct 244931 GCTTTGACGTTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTTTTGCCCGTG 244990
Query 101447 AAAGTTTTTACAAATATCTGCATGGTT 101473
|| |||||||| ||||||||| ||
Sbjct 244991 TGGGTCTTTACAAAGATCTGCATGTTT 245017
>seq42152
Length=979470
Score = 116 bits (128), Expect = 3e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| | ||| | || | || ||||| || || || || || ||||| || |
Sbjct 315742 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 315801
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| | | |||| |||| ||||| |||||||| || | | ||| || ||||| |||
Sbjct 315802 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGA 315861
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| ||||| || ||||| || ||| |||| | |||||| | |||||
Sbjct 315862 ATGCCTTCCTTATCCTGGATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 315921
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
||||| |||| || |||||||| | || || || || ||||||||
Sbjct 315922 TCAAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 315968
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| | ||| | || | || ||||| || || || || || ||||| || |
Sbjct 315514 CCACCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAA 315573
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| ||| | | |||| |||| ||||| |||||||| || | | ||| || ||||| |||
Sbjct 315574 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGA 315633
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| ||||| || ||||| || ||| |||| | |||||| | |||||
Sbjct 315634 ATGCCTTCCTTATCCTGGATTTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 315693
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || |||| || |||||||| | || || || || ||||||||
Sbjct 315694 TCCAGGGTGATAGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 315740
Score = 109 bits (120), Expect = 4e-19
Identities = 146/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
|| ||||| || || || || || ||||| || | | ||| | | |||| |||| |||
Sbjct 315310 TGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGC 315369
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| |||||||| || | | ||| || ||||| || ||||||||||||||||| || ||
Sbjct 315370 TTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCTTTATCTTGGATCTTG 315429
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
|| ||| |||| | |||||| | ||||| || || |||| || ||||||||
Sbjct 315430 GCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTC 315489
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || || || || ||||||||
Sbjct 315490 AGGGTCTTCACGAAGATCTGCAT 315512
>seq97443
Length=343
Score = 114 bits (126), Expect = 1e-20
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 101242 TCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGC 101301
||| || | |||||| | || | ||||||||||| || || || ||||||||||| ||
Sbjct 252 TCCACCACGTAAACGAAGGACAAGGTGAAGGGTAGACTCCTTCTGGATATTGTAATCCGC 193
Query 101302 GATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGG 101361
| ||| || |||| || | ||||| || ||||| |||||||| || || || || ||
Sbjct 192 CAAAGTCCTCCCATCCTCAAGCTGCTTCCCAGCAAAGATCAAACGTTGCTGGTCTGGTGG 133
Query 101362 AATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCAC 101421
|| ||||| || || || || || || ||| | || | ||| ||||| | || ||
Sbjct 132 GATCCCTTCCTTGTCCTGTATCTTGGCCTTCACATTATCAATAGTATCAGAGCTCTCAAC 73
Query 101422 TTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | |||| || || || || || || || ||||| ||||||||
Sbjct 72 CTCCAAGGTGATGGTCTTCCCAGTCAAGGTCTTGACAAAGATCTGCAT 25
>seq44178
Length=3241816
Score = 107 bits (118), Expect = 2e-18
Identities = 144/199 (72%), Gaps = 1/199 (1%)
Strand=Plus/Plus
Query 101278 TTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAA 101337
|| ||||| | ||| ||| || | || ||| | | |||| |||| || || || |||||
Sbjct 924520 TTTTTTTTTTTTAT-GTAGTCTGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAA 924578
Query 101338 TATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAAT 101397
||||| |||||| || || || || || || || || ||||||||||| ||| ||| |
Sbjct 924579 TATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTTTGGCTTTGACATT 924638
Query 101398 TTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTAC 101457
|| | |||||| | || || ||||| |||| |||||||| || | || || ||
Sbjct 924639 CTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTCAC 924698
Query 101458 AAATATCTGCATGGTTACG 101476
||| ||||||||| || ||
Sbjct 924699 AAAGATCTGCATGTTTGCG 924717
>seq38975
Length=485
Score = 96.9 bits (106), Expect = 3e-15
Identities = 107/143 (75%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| || | || ||| | || ||||| | || ||||| ||||| || |||||||||| |
Sbjct 145 CCACCACGTAGACGAAGGACCAAATGTAATGTTGATTCCTTTTGAATGTTGTAATCGGAG 86
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | | |||| || | ||||||||| ||||| || | ||| ||||||||||| ||
Sbjct 85 AGGGTGCGGCCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGG 26
Query 101363 ATGCCTTCTTTATCTTGAATTTT 101385
|| || || || |||||||| ||
Sbjct 25 ATACCCTCCTTGTCTTGAATCTT 3
>seq68558
Length=238
Score = 95.1 bits (104), Expect = 1e-14
Identities = 138/195 (71%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 101276 GATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCA 101335
|| || || || || ||||| ||||| | || | | | || |||| ||||| || ||
Sbjct 237 GACTCCTTCTGGATGTTGTAGTCGGCTAGGGTACGGCCGTCCTCCAGCTGCTTTCCGGCG 178
Query 101336 AATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACA 101395
|| ||||||||||| ||||| || ||||| ||||| || || || || || || ||
Sbjct 177 AAGATCAAACGCTGCTGATCCGGGGGAATCCCTTCCTTGTCCTGGATCTTGGCCTTGACG 118
Query 101396 ATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTT 101455
| || | ||||| || | ||||| || || |||| || ||||| || | |||||
Sbjct 117 TTGTCGATGGTGTCGGAGCTCTCCACCTCTAGGGTGATGGTCTTGCCCGTGAGGGTTTTG 58
Query 101456 ACAAATATCTGCATG 101470
|| || |||||||||
Sbjct 57 ACGAAGATCTGCATG 43
>seq21918
Length=9848887
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| | ||| | || | || ||||| || ||||| || || ||||| || |
Sbjct 7768209 CCACCTCTGAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 7768268
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | |||| |||| ||||| || ||||| ||||| | ||| || || || |||
Sbjct 7768269 AGGGTGCGCCCATCTTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGA 7768328
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| || ||||| || ||| || ||| | || | |||||| | || ||
Sbjct 7768329 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACC 7768388
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || |||| || ||||| || | || || || || ||||||||
Sbjct 7768389 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 7768435
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
|| ||||| | ||| | || | || ||||| || ||||| || || ||||| || |
Sbjct 7768665 CCACCTCTGAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 7768724
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | |||| |||| ||||| || ||||| ||||| | ||| || || || |||
Sbjct 7768725 AGGGTGCGCCCATCTTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGA 7768784
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|||||||| ||||| || || ||| || ||| | || | |||||| | || ||
Sbjct 7768785 ATGCCTTCCTTATCCTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCGACC 7768844
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || |||| || ||||| || | || || || || ||||||||
Sbjct 7768845 TCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 7768891
>seq52973
Length=211
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313
||| || || | |||||||| ||||||||||| || || || || || | |||| |
Sbjct 210 ACGCAACACAAGGTGAAGGGTGGATTCTTTTTGAATGTTATAGTCAGCAAGCGTTCGTCC 151
Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373
||| |||| |||||||| ||||| ||||| | ||| || || || || || || || ||
Sbjct 150 ATCCTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCAGGTGGGATACCCTCCTT 91
Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433
|||||| || || || ||| | || | ||||| || | ||||| || | || |
Sbjct 90 ATCTTGGATCTTAGCCTTGACATTGTCAATGGTGTCCGAGCTCTCCACCTCCAAGGTAAT 31
Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATAT 101463
|| || || || | || || || |||||
Sbjct 30 AGTCTTTCCTGTGAGGGTCTTGACGAATAT 1
>seq43203
Length=1387722
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 101272 GGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGCTTACC 101331
||| || | |||||| || ||||| || | || ||| | |||| |||| ||||| ||
Sbjct 881613 GGTGGACTGTTTTTGGATGTTGTAGTCTGAGAGAGTGAGGCCATCCTCCAGCTGCTTGCC 881672
Query 101332 TGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTT 101391
|||||||||| |||||| || || || || || || || || ||||||||||| |||
Sbjct 881673 AGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTTTGGCTTT 881732
Query 101392 TACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGT 101451
| | | || |||| | | || || ||||| |||| || ||||| || | ||
Sbjct 881733 GAAATTCTCAGTGGTGTAACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGT 881792
Query 101452 TTTTACAAATATCTGCAT 101469
|| ||||| | ||||||
Sbjct 881793 CTTCACAAAGAGCTGCAT 881810
>seq43693
Length=2839110
Score = 86.0 bits (94), Expect = 5e-12
Identities = 145/212 (68%), Gaps = 11/212 (5%)
Strand=Plus/Minus
Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317
|| || | |||||| ||||| || ||||| || ||||| || | ||||
Sbjct 374739 AACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGA-----------CATCT 374691
Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377
||||||||||| || ||||| |||| | || ||||| || |||| ||||| |||||
Sbjct 374690 TCCAATTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAACTCCTTCCTTATCC 374631
Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437
|| || || |||||| ||||| || | | | ||| || ||||| |||| ||
Sbjct 374630 TGGATATTGGCCTTTACATTTTCTGTTGTATTCAAGGGTTCAACCTCAAGGGTGATGGTC 374571
Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || || | ||||| || || ||||||||
Sbjct 374570 TTCCCTGTAAGGGTTTTCACGAAAATCTGCAT 374539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395623925417784
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