Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq9420 134 3e-26
seq37045 93.3 8e-14
>seq9420
Length=356144
Score = 134 bits (148), Expect = 3e-26
Identities = 396/598 (66%), Gaps = 22/598 (4%)
Strand=Plus/Minus
Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533
||||| ||| ||||||| |||||||| || || |||||||||||| ||| | ||
Sbjct 53443 GATATCTGGCAGATGTATAAGAAGGCGGAAGCTTCCTTCTGGACCGCCGAGGAGGTGGAC 53384
Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCT--ATCCAAAGACGAGCAGCATTTTCTCA 25591
||| |||||||||| |||| | | || | || ||| ||| || ||||| |
Sbjct 53383 CTGTCCAAGGACATTTGGCACTGGGAATCCCTGAAGCCCAAGGAGAG-AG-ATTTTATAT 53326
Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651
| || ||| ||||||||||| |||||| ||||| || || || || |||
Sbjct 53325 CCCATGTTCTGGTTTTCTTTGCAGCAAGTGATGGCATAGTAAATGAAAACTTGGTGGAGC 53266
Query 25652 GATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCA 25711
|||| | | ||||| ||| || ||| ||||||| || ||||| || ||||
Sbjct 53265 GATTTAGCCAAGAAGTTCAGATGACAGAAGCCCGCTGTTTCTGTGGCTTCCAAATTGCCA 53206
Query 25712 TCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTC--TGATGACG--TACATTACAGAC 25767
| || || | || ||||| ||||| || ||| | |||| ||||| | |||
Sbjct 53205 TAGAGAACATACATTCTGAAATGTAT----AGTTTCCTTATTGACACTTACATAAAAGAT 53150
Query 25768 GTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAG 25827
| || || || || | ||||| || || || | |||||| ||||
Sbjct 53149 CCCAAAGAAAGGGAATTTCTCCTCAATGCCACTGAAACGATGCCTTGTGTCAAGAAGAAG 53090
Query 25828 GCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGC-GCTACGTTTGGCGAGCGGCTGGT 25886
|| |||||| || | ||||| | || || ||||| | ||| || || | ||
Sbjct 53089 GCAGATTGGGCCTTGCACTGGATTGGG-GACAAAGAAGCTACCTATGGTGAACGTGTTGT 53031
Query 25887 AGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCT 25946
|| ||||||||| | ||| |||||||||| |||| ||||| | || ||||||||
Sbjct 53030 AGTCTTTGCTGCAGCGGAAGGCATCTTTTCT---GGTTATTTTGCATCGATATTCTGGCT 52974
Query 25947 CAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACG 26005
|||| | | | |||| ||||| || || |||||||| || || || ||||| || |
Sbjct 52973 CAAG-AAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATTAGCAGAGATG 52915
Query 26006 AGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACC 26063
||||| | ||| | |||||||| |||||| | | || ||| || | ||||||||
Sbjct 52914 AGGGTTTACACTGTGATTTTGCTTGCCTGATGTTCA---AACACCTGGTACACAAACC 52860
>seq37045
Length=3135053
Score = 93.3 bits (102), Expect = 8e-14
Identities = 97/125 (78%), Gaps = 2/125 (2%)
Strand=Plus/Minus
Query 25885 GTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGG 25944
|||||||||||||| ||||| |||||||| || |||||| ||||| | || ||||||
Sbjct 1579345 GTAGCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCCGGTTCTTTTGCATCGATATTCTGG 1579286
Query 25945 CTCAAGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGA 26003
|||||| | | | |||| ||||| || || |||||||| || || |||||||| ||
Sbjct 1579285 CTCAAG-AAACGAGGACTGATGCCTGGCCTCACATTTTCCAATGAACTTATCAGCAGAGA 1579227
Query 26004 CGAGG 26008
||||
Sbjct 1579226 TGAGG 1579222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 927271429793280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |