Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= NC_019559.1 Length=202946 Score E Sequences producing significant alignments: (Bits) Value seq9262 129 8e-25 >seq9262 Length=4723420 Score = 129 bits (142), Expect = 8e-25 Identities = 188/266 (71%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 153745 CCCGCGTCCCTCAGATGCTCGTTGAAAACTACACAAGAACCTTTAATTGTAACGTGGCAA 153804 || || ||| | |||||||| || ||| | | || ||| | ||||| || ||||| Sbjct 1893645 CCTGCTTCCTTAAGATGCTCTCTGCAAAATGCCCAGGAAGTCCTGATTGTGACATGGCAG 1893586 Query 153805 AAGAAGAAAGCTGTAGGTCCAGAAAATATGGCCACGTATAGCAAAGCCCACGGTGTAGTG 153864 || |||||||||||| | |||||||| |||| ||| | ||| | ||| || || ||| Sbjct 1893585 AAAAAGAAAGCTGTAAGCCCAGAAAACATGGTCACCTTCAGCGAGAACCATGGGGTGGTG 1893526 Query 153865 CTTCAGCCCACATATAAAGATAGAATTAATATAACCGAATTAGGTCTTTTAAACAGTAGT 153924 | ||||| | ||||| || | || || || ||| | | || || |||| | Sbjct 1893525 ATCCAGCCTGCCTATAAGGACAAGATAAACATTACCCAGCTGGGACTCCAAAACTCAACC 1893466 Query 153925 ATAACGTTTTGGAATGCAACACTGGATGATGAAGGCTGTTATATGTGTCTGTTTAATATG 153984 || || || |||||| || ||||| |||||||| ||||| |||||||| || |||| Sbjct 1893465 ATCACCTTCTGGAATATCACCCTGGAGGATGAAGGGTGTTACATGTGTCTCTTCAATACC 1893406 Query 153985 TTCGGTTCTGGTAAGGTATCGGGAAC 154010 || |||||||| ||| | || ||||| Sbjct 1893405 TTTGGTTCTGGGAAGATCTCAGGAAC 1893380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 648199352085120