Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq38975 109 8e-19
seq69637 87.8 3e-12
>seq38975
Length=485
Score = 109 bits (120), Expect = 8e-19
Identities = 139/190 (73%), Gaps = 1/190 (1%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
||||| || || | || || ||||||||||| || |||||||||||||| ||| ||
Sbjct 147 ATGCAGATTTTCGTCAAGACTTTGACTGGAAAGACCATTACATTAGAAGTAGAATCATCA 206
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| |||| ||||| || || || |||||||| || || || || || || |||
Sbjct 207 GATACTATTGATAACGTTAAGGCGAAGATCCAAGATAAGGAGGGTATCCCACCCGACCAA 266
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| ||||||| | ||| || |||||| | || || |||||| | || ||||| ||
Sbjct 267 CAACGATTGATCTTTGCTGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACAAC 326
Query 156003 ATATCCAAAG 156012
|| || ||||
Sbjct 327 AT-TCAAAAG 335
>seq69637
Length=240
Score = 87.8 bits (96), Expect = 3e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || ||||||| || || || ||| | || |||||| |||
Sbjct 70 ATGCAAATCTTTGTCAAGACCCTGACTGGTAAGACCATCACACTTGAGGTCGAACCTTCA 129
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|| | || ||| ||||| ||||| ||||| |||||||| || || || || ||
Sbjct 130 GACACAATCGAAAATGTGAAGGCCAAAATCCAAGACAAAGAAGGAATCCCACCTGACCAG 189
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978
|| | |||| | |||||||||||||| ||||||
Sbjct 190 CAGCGTCTGATCTTCGCCGGTAAGCAGCTGGAAGAT 225
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 730632282019200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |