Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq33539 145 1e-29
seq42510 136 7e-27
seq39797 136 7e-27
seq38975 132 9e-26
seq44074 131 3e-25
seq36884 127 4e-24
seq40450 104 4e-17
seq112392 96.9 6e-15
seq38591 91.5 3e-13
seq69637 86.0 1e-11
>seq33539
Length=658333
Score = 145 bits (160), Expect = 1e-29
Identities = 176/240 (73%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| ||| |||||| | ||||| || || | ||| | ||||| ||| || ||||||
Sbjct 236586 TTTCTTAACACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATT 236645
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
|| || || |||| ||| | || |||| ||| || |||||||| || | ||| || ||
Sbjct 236646 GTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTG 236705
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
||||| || |||||||| ||||| || || || |||||||| ||| ||||||||
Sbjct 236706 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCTGA 236765
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
| ||| || || || || ||||| || || || | ||||| | ||| |||||||||||
Sbjct 236766 GGGTTCAACCTCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTT 236825
>seq42510
Length=1301382
Score = 136 bits (150), Expect = 7e-27
Identities = 174/240 (73%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || |||||| | ||||| || || | ||| | ||||| ||| || ||||||
Sbjct 87115 TTTCTTAGCACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATT 87174
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
|| || || |||| ||| | || |||| ||| || |||||||| || | ||| || ||
Sbjct 87175 GTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTG 87234
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
||||| || |||||||| ||||| || || || |||||||| ||| ||||| ||
Sbjct 87235 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGA 87294
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
| ||| || || || || ||||| || || || | ||||| | ||| |||||||||||
Sbjct 87295 GGGTTCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 87354
>seq39797
Length=2305578
Score = 136 bits (150), Expect = 7e-27
Identities = 174/240 (73%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || |||||| | ||||| || || | ||| | ||||| ||| || ||||||
Sbjct 1757162 TTTCTTAGCACCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATATT 1757103
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
|| || || |||| ||| | || |||| ||| || |||||||| || | ||| || ||
Sbjct 1757102 GTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTG 1757043
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
||||| || |||||||| ||||| || || || |||||||| ||| ||||| ||
Sbjct 1757042 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGA 1756983
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
| ||| || || || || ||||| || || || | ||||| | ||| |||||||||||
Sbjct 1756982 GGGTTCAACCTCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 1756923
>seq38975
Length=485
Score = 132 bits (146), Expect = 9e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 171842 ACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGA 171901
|||||| | ||| || | || || || || || | || || ||| || ||||| ||
Sbjct 374 ACCACCACGAAGACGGAGCACCAAGTGCAATGTCGATTCCTTTTGAATGTTGTAATCCGA 315
Query 171902 TAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGG 171961
| | || |||| ||||| || || |||||||| || |||| |||||||| |||||
Sbjct 314 AAGGGTTCTGCCGTCCTCCAACTGCTTTCCAGCAAAGATCAATCGTTGTTGGTCGGGTGG 255
Query 171962 TATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTAC 172021
|| || || |||||||| || || || || ||| ||||||||||| ||||||||
Sbjct 254 GATACCCTCCTTATCTTGGATCTTCGCCTTAACGTTATCAATAGTATCTGATGATTCTAC 195
Query 172022 TTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
||||| |||||||| || ||||| || || || | ||| ||||||||
Sbjct 194 TTCTAATGTAATGGTCTTTCCAGTCAAAGTCTTGACGAAAATCTGCAT 147
>seq44074
Length=2336235
Score = 131 bits (144), Expect = 3e-25
Identities = 173/240 (72%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || |||||| | ||||| || | | ||| | ||||| ||| || ||||||
Sbjct 1652716 TTTCTTAGCACCACCACGAAGTCTCAACGCAAGATGAAGAGTAGACTCCTTTTGAATATT 1652775
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
|| || || |||| || | || |||| ||| || |||||||| || | ||| || ||
Sbjct 1652776 GTACTCAGACAAAGTATGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTG 1652835
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
||||| || |||||||| ||||| || || || |||||||| ||| ||||||||
Sbjct 1652836 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCTGA 1652895
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
||| || || ||||| ||||| || || || | ||||| | ||| |||||||||||
Sbjct 1652896 GAGTTCAACCTCGAGAGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTT 1652955
>seq36884
Length=899181
Score = 127 bits (140), Expect = 4e-24
Identities = 172/240 (72%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || | |||| | ||||| || || ||||| | ||||| |||||| ||||||
Sbjct 628402 TTTCTTAGCAGCACCACGAAGTCTCAACACAAAATGAAGAGTAGACTCTTTTTGAATATT 628461
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
|| || || |||| ||| | || |||| ||| || |||||||| || | |||||| ||
Sbjct 628462 GTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTCTGCTG 628521
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
|||| || |||||||| ||| | || || || | |||||| ||| || |||||
Sbjct 628522 ACCAGGAGGAATTCCTTCCTTAACCTGGATCTTGGCCTATACATTTTCTATTGTGTCTGA 628581
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
| ||| || || || || ||||| || || || | ||| | | ||| |||||||||||
Sbjct 628582 GGGTTCAACCTCGAGGGTGATGGTCTTCCCTGTAAGGGTTATCACGAAAATCTGCATTTT 628641
>seq40450
Length=975263
Score = 104 bits (114), Expect = 4e-17
Identities = 167/240 (70%), Gaps = 0/240 (0%)
Strand=Plus/Plus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || |||||| | ||||| || | | ||| | ||||| ||| || ||| ||
Sbjct 15880 TTTCTTAGCACCACCACAAAGTCTCAACAAAAGATGAAGAGTAGGCTCCTTTTGAATGTT 15939
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTG 171952
| || || |||| ||| | || |||| ||| | |||||||| || | ||| || ||
Sbjct 15940 GCAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTCGCCAGCAAAGATCAGTCTTTGCTG 15999
Query 171953 GTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGA 172012
||||| || |||||||| ||||| || || || |||||||| | ||||||||
Sbjct 16000 ATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGCCGTATCTGA 16059
Query 172013 CGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
| ||| || || || || || || || || ||| ||||| | || |||||||||||
Sbjct 16060 GGGTTCAACCTCAAGGGTGATAGTCTTCCCCCTTAGGGTTTTCACAAAAATCTGCATTTT 16119
>seq112392
Length=498
Score = 96.9 bits (106), Expect = 6e-15
Identities = 131/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
||||||||| || | |||| || | || |||| ||||| |||||||| || || |
Sbjct 165 AATATTATAGTCGGCCAAAGTACGGCCATCCTCCAGCTGTTTTCCAGCAAAGATCAACCG 224
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
|||||||||||| || || || || || || || || || ||| |||||| || ||
Sbjct 225 CTGTTGGTCAGGGGGGATCCCCTCCTTGTCCTGAATCTTTGCTTTCACATTATCAATGGT 284
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || || || || || || ||||| || ||||| || || |||| || |||||
Sbjct 285 ATCCGAACTCTCAACCTCCAGGGTGATGGTCTTCCCAGTCAAGGTCTTAACAAAAATCTG 344
Query 172067 CAT 172069
|||
Sbjct 345 CAT 347
>seq38591
Length=2585024
Score = 91.5 bits (100), Expect = 3e-13
Identities = 169/245 (69%), Gaps = 6/245 (2%)
Strand=Plus/Minus
Query 171833 TTTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATT 171892
|||| || |||||| | |||| || || | ||| | ||||| ||| || ||| |
Sbjct 1809161 TTTCTTAGCACCACCACGAAGTGTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTG 1809102
Query 171893 ATAATCTGATAAAGATCGTTCGTCATCCAATTG--TTTACCAGCAAAAATTAATCTCTGT 171950
|| || || |||| | | | || |||| ||| ||| | |||||| || | ||| ||
Sbjct 1809101 -TAGTCAGACAAAGTACATCCATCCTCCAGTTGCTTTTGCTAGCAAAGATCAGTCTTTGC 1809043
Query 171951 TGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCT 172010
||||| || |||||||| ||||| || || || |||||||| | | ||||||
Sbjct 1809042 CCATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTCGTATCT 1808983
Query 172011 GACGATTCTACTTCTAG---AGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
|| | ||| || || || ||| ||||| || || | | ||||| ||||| ||||||
Sbjct 1808982 GAGGGTTCAACCTCGAGGTCAGTGATGGTCTTCCCCATAAGGGTTTTCATGAAAATCTGC 1808923
Query 172068 ATTTT 172072
|||||
Sbjct 1808922 ATTTT 1808918
>seq69637
Length=240
Score = 86.0 bits (94), Expect = 1e-11
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 171915 TCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTA 171974
|| |||| || ||||| || || || | | ||| ||||||||||| |||||||||||
Sbjct 224 TCTTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCAGGTGGGATTCCTTCTTTG 165
Query 171975 TCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATG 172034
||||| ||||| || ||||| || || ||||| | ||| || || || || |||
Sbjct 164 TCTTGGATTTTGGCCTTCACATTTTCGATTGTGTCTGAAGGTTCGACCTCAAGTGTGATG 105
Query 172035 GTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| |||||||| | || || | || || |||||
Sbjct 104 GTCTTACCAGTCAGGGTCTTGACAAAGATTTGCAT 70
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903602790129600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |