Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq11730 95.1 4e-14
seq9420 89.7 2e-12
>seq11730
Length=1413057
Score = 95.1 bits (104), Expect = 4e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 302607 ACCAGTTGTAGATGTTTTTACAGCTGTATCAATTAGACCAACACGACCACCCATAGCATG 302666
|||||| || || || ||||| || ||||| || || ||||||| ||||| || ||
Sbjct 162206 ACCAGTCTCAGCAGTCTTGACAGCCGTGTCAATGAGCCCCTCACGACCCCCCATGGCGTG 162147
Query 302667 GAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGC 302726
||| || | ||| ||| || || | | ||||| |||| || || |||||
Sbjct 162146 GAAAAAGAACTCGGTGGGTGTGAGGCCAGCTAGGTAGGAGTTCTCCACAAAGCCACGGCT 162087
Query 302727 CTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGG 302786
||||||| | ||| |||| | ||||| ||||| |||| || || |||| ||||
Sbjct 162086 CTCGGGCCCGTAGTCATCCTTGATGAAGTGAGGCAGAGTCCGGTGCTTGAAGCCAAATGG 162027
Query 302787 GATACGCTTTCCATCAACGTTCTGCTGTCC 302816
|| |||||||| || ||||||||||| ||
Sbjct 162026 AATCCGCTTTCCCTCCACGTTCTGCTGCCC 161997
>seq9420
Length=356144
Score = 89.7 bits (98), Expect = 2e-12
Identities = 364/566 (64%), Gaps = 11/566 (2%)
Strand=Plus/Minus
Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAACAGCAAGAT 133135
||||| || ||||| | || || | || || |||||||||||||| || | ||| |
Sbjct 53470 TTTGTCATCTTCCCCACCGAGTACCATGATATCTGGCAGATGTATAAGAAGGCGGAAGCT 53411
Query 133136 TTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAGCCCTT 133195
| || ||||| | || || || | ||||| ||| ||||||||| ||||
Sbjct 53410 TCCTTCTGGACCGCCGAGGAGGTGGACCTGTCCAAGGACATTTGGCACTGGGAATCCCTG 53351
Query 133196 ACTGGGGATGAAAAACATTTTAT-TTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGG 133254
| | || | | ||||||| | | ||| || | | || ||||| || ||||||||
Sbjct 53350 AAGCCCAAGGAGAGAGATTTTATATCCCATG-TTCTGGTTTTCTTTGCAGCAAGTGATGG 53292
Query 133255 TATTGTTCTTGAAAATTTAGGAACACGGTTTATGGGAGAAGTTCAACTGGCCGAAGCCCG 133314
|| || |||||| || | || |||| ||||||||| || | ||||||||
Sbjct 53291 CATAGTAAATGAAAACTTGGTGGAGCGATTTAGCCAAGAAGTTCAGATGACAGAAGCCCG 53232
Query 133315 TGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACATATTCTACTCT 133374
|| | ||| | || ||||| || || || || |||||| | ||| | ||
Sbjct 53231 CTGTTTCTGTGGCTTCCAAATTGCCATAGAGAACATACATTCTGAAATGTATAGTTTCCT 53172
Query 133375 AATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAACTATTCAACGCCATT--AGC 133432
||||| |||||||| |||||| || | | | | || |||| |||| | | |
Sbjct 53171 TATTGACACTTACATAAAAGATCCCAAAGAAAGGGAATTTCTCCTCAATGCCACTGAAAC 53112
Query 133433 GAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGT 133492
|| | |||||| | || ||||| | || ||||| | | ||||| ||||||
Sbjct 53111 GA--TGCCTTGTGTCAAGAAGAAGGCAGATTGGGCCTTGCACTGGATTGGGGACAAAGAA 53054
Query 133493 GCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGT 133552
|| | | || | ||| | || | ||||||| || || ||||| |||| ||||
Sbjct 53053 GCTACCTATGGTGAACGTGTTGTAGTCTTTGCTGCAGCGGAAGGCATCTTTT---CTGGT 52997
Query 133553 GCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTC 133611
|| ||| || || || ||||| || || || || | | ||||| || |||||
Sbjct 52996 -TATTTTGCATCGATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTC 52938
Query 133612 TAACGAACTTATTTCAAGGGACGAGG 133637
|| ||||||||| || || ||||
Sbjct 52937 CAATGAACTTATTAGCAGAGATGAGG 52912
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1469262160371544
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |