Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq23478 136 3e-27
seq38975 91.5 1e-13
>seq23478
Length=255467
Score = 136 bits (150), Expect = 3e-27
Identities = 224/321 (70%), Gaps = 4/321 (1%)
Strand=Plus/Minus
Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377
|| || || || || |||||||| ||||| | ||||| || ||||| ||||| | |
Sbjct 126954 TCTGTTTCAGGATTCTCACATTCAGGACAGAGAACAAATTTTTTAATGAATCCATCCAAC 126895
Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437
| ||| || | |||| || || || || ||||| ||| | || || || || |
Sbjct 126894 ATGTCTTGCAGCTTATTCACCTCATGAGATCCATTGACAATGTAACGGTCATTCTTAACA 126835
Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGA 34497
|| | ||| || || || |||||||| || || || || || || || || | | ||
Sbjct 126834 TCAAACTGGGTCTGTGCTCCCAGCTCACAACCAAAATATTTGGTGGGATACGTTGGAGGC 126775
Query 34498 CGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCC 34557
|| ||||||||| || | || | ||||||| || || |||||||| || || ||
Sbjct 126774 CGATTAAGCGCCTTTGCAACATCAACCGTGTTGACTATAACTGTCTTGATTCCATTTCCT 126715
Query 34558 TTTCCTTCGACCTTGGC--GCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCA 34615
|| || ||||||||||| |||| || ||||| |||||||| |||||| ||| | ||
Sbjct 126714 TTGCCCTCGACCTTGGCAATCAGA--CGGGGCATCTTGTAGCGATAGAACTGGTCTGACA 126657
Query 34616 CATTGCGGTTAACGTTCACAG 34636
| ||||||| || || ||||
Sbjct 126656 CGCTGCGGTTGACATTGACAG 126636
>seq38975
Length=485
Score = 91.5 bits (100), Expect = 1e-13
Identities = 146/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332
||||| || || ||||| ||||| || || || |||||||| | ||| || |
Sbjct 147 ATGCAGATTTTCGTCAAGACTTTGACTGGAAAGACCATTACATTAGAAGTAGAATCATCA 206
Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392
|||||| | | | || || |||||| || || || || | || || |||
Sbjct 207 GATACTATTGATAACGTTAAGGCGAAGATCCAAGATAAGGAGGGTATCCCACCCGACCAA 266
Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452
||| || | || | ||| || || ||| ||||||| | |||||| | |||||||||||
Sbjct 267 CAACGATTGATCTTTGCTGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACAAC 326
Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482
|||||||| ||||| || |||||| |||||
Sbjct 327 ATTCAAAAGGAATCGACATTGCACTTGGTG 356
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412159770423416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |