Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq33539 87.8 1e-12
seq42510 84.2 2e-11
seq39797 84.2 2e-11
>seq33539
Length=658333
Score = 87.8 bits (96), Expect = 1e-12
Identities = 164/241 (68%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|||||||| ||||| || ||||| | ||||| || ||||| ||| |||| || |
Sbjct 236825 AAAATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGTTGAACCC 236766
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
||||| | | | ||||| ||||| ||||| ||||| | || |||
Sbjct 236765 TCAGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 236706
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
||||| ||||| || | ||| || || || ||||| || | || || | ||||||
Sbjct 236705 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 236646
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAA 107792
|| ||||||||||||||||| | || | ||||||||| | || || || ||| |||
Sbjct 236645 AATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGGTGTTAAGAAA 236586
Query 107793 A 107793
|
Sbjct 236585 A 236585
>seq42510
Length=1301382
Score = 84.2 bits (92), Expect = 2e-11
Identities = 163/241 (68%), Gaps = 0/241 (0%)
Strand=Plus/Minus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|||||||| ||||| || ||||| | || || || ||||| ||| |||| || |
Sbjct 87354 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 87295
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
||||| | | | ||||| ||||| ||||| ||||| | || |||
Sbjct 87294 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 87235
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
||||| ||||| || | ||| || || || ||||| || | || || | ||||||
Sbjct 87234 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 87175
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAA 107792
|| ||||||||||||||||| | || | ||||||||| | || || || ||| |||
Sbjct 87174 AATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGGTGCTAAGAAA 87115
Query 107793 A 107793
|
Sbjct 87114 A 87114
>seq39797
Length=2305578
Score = 84.2 bits (92), Expect = 2e-11
Identities = 163/241 (68%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|||||||| ||||| || ||||| | || || || ||||| ||| |||| || |
Sbjct 1756923 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 1756982
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
||||| | | | ||||| ||||| ||||| ||||| | || |||
Sbjct 1756983 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 1757042
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
||||| ||||| || | ||| || || || ||||| || | || || | ||||||
Sbjct 1757043 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 1757102
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAA 107792
|| ||||||||||||||||| | || | ||||||||| | || || || ||| |||
Sbjct 1757103 AATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGGTGCTAAGAAA 1757162
Query 107793 A 107793
|
Sbjct 1757163 A 1757163
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398218034023768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |