Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq38975 93.3 4e-14 seq69637 84.2 2e-11 >seq38975 Length=485 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 137185 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 137244 || || |||| ||| | || ||||| | ||| ||||| ||||| |||||||||||| Sbjct 145 CCACCACGTAGACGAAGGACCAAATGTAATGTTGATTCCTTTTGAATGTTGTAATCGGAG 86 Query 137245 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 137304 | |||| || || ||||| ||||||||| |||| |||||||| |||||||| || Sbjct 85 AGGGTGCGGCCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGG 26 Query 137305 ATGCCTTCTTTGTC 137318 || || || ||||| Sbjct 25 ATACCCTCCTTGTC 12 >seq69637 Length=240 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 137257 TCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTG 137316 ||||| || || ||||| || |||||||||| ||||| || || || || ||||||||| Sbjct 224 TCTTCCAGCTGCTTACCGGCGAAGATCAGACGCTGCTGGTCAGGTGGGATTCCTTCTTTG 165 Query 137317 TCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACC 137376 || ||||| || | | ||| | ||||||| ||||| || |||| || | Sbjct 164 TCTTGGATTTTGGCCTTCACATTTTCGATTGTGTCTGAAGGTTCGACCTCAAGTGTGATG 105 Query 137377 GTCTTGCCGGTCAATGTTTTTACGAATATTTGCATA 137412 ||||| || |||| || || || || ||||||||| Sbjct 104 GTCTTACCAGTCAGGGTCTTGACAAAGATTTGCATA 69 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487716455318400