Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq42383 95.1 2e-14 >seq42383 Length=594172 Score = 95.1 bits (104), Expect = 2e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444 |||||||||| | | |||||||| | || || || || ||||||||||| || || || Sbjct 25285 TGGTGGTACTTTGTTTCTAAAGGAGTTGAGTATTTGGACACAGTGTTTTTTATTCTGAGA 25226 Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504 || || || || ||| || || || || |||||||| | ||| |||||||| || Sbjct 25225 AAGAAAAACAACCAAGTTTCTTTCCTTCATGTGTATCATCACTGTACGATGTTTACCTTG 25166 Query 58505 GGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 | ||| | || ||||| ||| |||||||||| || Sbjct 25165 TGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACA 25131 Score = 84.2 bits (92), Expect = 4e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 58541 GCATTTTTCGGCGCTCAGTTGAATTCTTTTATCCATGTTATTATGTATAGTTATTATGGT 58600 |||||||| || || ||| ||||||| ||||||||||| |||||||| || ||||| Sbjct 23018 GCATTTTTTGGAGCCCAGATGAATTCCTTTATCCATGTGATTATGTACTCATACTATGGG 22959 Query 58601 ATGGCGGCGTGTGGACATATGTTTAAAAAGTATTTATGGTGGAAGCGTTACCTTACTATA 58660 | || || | ||| | | || | || ||| | |||||||| || ||||| ||||| Sbjct 22958 TTAGCTGCATTTGGCCCATGGATTCAGAAATATCTTTGGTGGAAACGATACCTGACTATG 22899 Query 58661 ATGCAATTGGT 58671 ||||| |||| Sbjct 22898 TTGCAACTGGT 22888 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 901880911768320