Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq42510 86.0 6e-12
seq39797 86.0 6e-12
seq33539 86.0 6e-12
>seq42510
Length=1301382
Score = 86.0 bits (94), Expect = 6e-12
Identities = 151/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
||| ||||| | || || ||||| | || || || | ||||| |||| || ||| |
Sbjct 87355 CAAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACC 87296
Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
| ||||| || || | ||||| || || ||||| || || || || || ||
Sbjct 87295 CTCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 87236
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350
|||||||||||| || | | ||||| ||||| ||||||| | | | | || ||
Sbjct 87235 TCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTA 87176
Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390
|||||||||||| || || || ||||| | ||||| |||
Sbjct 87175 CAATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGA 87136
>seq39797
Length=2305578
Score = 86.0 bits (94), Expect = 6e-12
Identities = 151/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
||| ||||| | || || ||||| | || || || | ||||| |||| || ||| |
Sbjct 1756922 CAAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACC 1756981
Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
| ||||| || || | ||||| || || ||||| || || || || || ||
Sbjct 1756982 CTCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 1757041
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350
|||||||||||| || | | ||||| ||||| ||||||| | | | | || ||
Sbjct 1757042 TCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTA 1757101
Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390
|||||||||||| || || || ||||| | ||||| |||
Sbjct 1757102 CAATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGA 1757141
>seq33539
Length=658333
Score = 86.0 bits (94), Expect = 6e-12
Identities = 151/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230
||| ||||| | || || ||||| | || || || | ||||| |||| || ||| |
Sbjct 236826 CAAAATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGTTGAACC 236767
Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290
| ||||| || || | ||||| || || ||||| || || || || || ||
Sbjct 236766 CTCAGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGA 236707
Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350
|||||||||||| || | | ||||| ||||| ||||||| | | | | || ||
Sbjct 236706 TCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTA 236647
Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390
|||||||||||| || || || ||||| | ||||| |||
Sbjct 236646 CAATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGA 236607
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 444340454595840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |