Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_028238.1
Length=188534
Score E
Sequences producing significant alignments: (Bits) Value
seq42383 86.0 8e-12
seq38390 82.4 9e-11
>seq42383
Length=594172
Score = 86.0 bits (94), Expect = 8e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 32676 TGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCATAATGAGA 32735
|||| || ||| | |||||||| | || ||| | || || | || || || |||||
Sbjct 25285 TGGTGGTACTTTGTTTCTAAAGGAGTTGAGTATTTGGACACAGTGTTTTTTATTCTGAGA 25226
Query 32736 AAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGTTTACTTTA 32795
|||||| ||||||||| || | || || || || || | ||| |||||||| ||
Sbjct 25225 AAGAAAAACAACCAAGTTTCTTTCCTTCATGTGTATCATCACTGTACGATGTTTACCTTG 25166
Query 32796 GGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830
| ||||| || ||||| ||| |||||||||||||
Sbjct 25165 TGGTGGATTGGAATTAAGTGGGTTGCAGGAGGACA 25131
>seq38390
Length=1205360
Score = 82.4 bits (90), Expect = 9e-11
Identities = 141/203 (69%), Gaps = 5/203 (2%)
Strand=Plus/Plus
Query 22635 ACTTCTCTTATTTCTGGATGCGCTATT---TTTTCAAATATAAGTTGTGCTACTCTATCG 22691
|||||| ||||||||||| | | ||| ||| || || ||||| || |||
Sbjct 764352 ACTTCTTCTATTTCTGGATAAAAAAATCCGTTTGCAA--ATGAGCTGTGCAGTTCAATCA 764409
Query 22692 CCCTTATTTACGTAAAATACATCCTTACTAAAATTAAATAACAATATACCTATATTTCCC 22751
||||| || || | ||| || || | ||| ||||| | | ||||| | ||||||
Sbjct 764410 CCCTTTTTGACTTCAAACTTTTCTTTGCCAAAGTTAAACAGTACAATACCAACATTTCCT 764469
Query 22752 CTGTAATCTCTATCTATCACACCCGCGCCTACATCGATAAAATGATTACATGCCAATCCC 22811
|| |||||| | |||| ||||| || |||||||| ||||| || || ||||| ||
Sbjct 764470 CTATAATCTTCACCTATGACACCAGCTCCTACATCAATAAAGTGTTTTGCAGCCAAGCCT 764529
Query 22812 GATCTAGGAGATATTCTTCCATA 22834
|| | |||| || |||||||||
Sbjct 764530 GACCGTGGAGCTACTCTTCCATA 764552
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 602159072042880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |