Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq44056 127 1e-24
seq41127 105 4e-18
seq112392 104 1e-17
seq45083 104 1e-17
seq44178 102 5e-17
seq38975 102 5e-17
seq21918 98.7 6e-16
seq52973 96.9 2e-15
seq37440 82.4 5e-11
>seq44056
Length=626226
Score = 127 bits (140), Expect = 1e-24
Identities = 169/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| |||| || |||||||||| || || ||| ||| || || ||||| || |||||
Sbjct 244786 GCCACCTCGCAGGCGCAACACCAGGTGCAGGGTGGACTCTTTGTGGATGTTGTAGTCTGA 244845
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || || | ||||| || ||||| ||||||||||| | |||||| ||||| || ||
Sbjct 244846 GAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGG 244905
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| |||||||||||| ||| ||| | ||| ||| | ||| ||||| | ||| |
Sbjct 244906 GATACCCTCCTTGTCT-TGAATTTTGGCTTTGACGTTCTCAATGGTGTCACTGGGCTCGA 244964
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
| || | ||| || ||||| || || || || ||||| |||||||||||
Sbjct 244965 CCTCAAGGGTGATGGTTTTGCCCGTGTGGGTCTTTACAAAGATCTGCATGTT 245016
>seq41127
Length=7874669
Score = 105 bits (116), Expect = 4e-18
Identities = 158/222 (71%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
|| |||||||||| || || ||| ||| || || ||||| || ||||| || || ||
Sbjct 7357811 AGGCGCAACACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCTGAGAGAGTGCGG 7357870
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| ||||| || ||||| || |||||||| | | ||| ||||| || || | ||||||
Sbjct 7357871 CCATCTTCCAGCTGTTTGCCAGCAAATATCAGATGCTACTGGTCAGGTGGGATACCCTCC 7357930
Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAA-AATTGTGTCTTCGCTCTCCACTTCCACGGT 34667
|||| | ||| |||| | ||| | | ||| ||||| | ||| || || | ||
Sbjct 7357931 TTGTGT-TGAACTTTGGCTTTGTCATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGG 7357989
Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
|| ||||| || || | || |||||||| |||||||||||
Sbjct 7357990 GATGGTTTTGCCTGTGAGGGTCTTCACAAAGATCTGCATGTT 7358031
>seq112392
Length=498
Score = 104 bits (114), Expect = 1e-17
Identities = 147/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 34504 TGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGT 34563
||||| ||| |||||| ||||| ||||| || | | || || | || || || |||
Sbjct 145 TGGAGGGTGGACTCCTTCTGAATATTATAGTCGGCCAAAGTACGGCCATCCTCCAGCTGT 204
Query 34564 TTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTT 34623
|| || ||||| || || ||||||||||| || || | ||||||||||| ||| ||
Sbjct 205 TTTCCAGCAAAGATCAACCGCTGTTGGTCAGGGGGGATCCCCTCCTTGTC-CTGAATCTT 263
Query 34624 TGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGT 34682
|| ||| || || ||| || || ||||| || |||| ||| || || || || ||
Sbjct 264 TGCTTTCACATTATCAATGGTATCCGAACTCTCAACCTCCAGGGTGATGGTCTTCCCAGT 323
Query 34683 TAACGTTTTCACAAAAATCTGCAT 34706
|| || || ||||||||||||||
Sbjct 324 CAAGGTCTTAACAAAAATCTGCAT 347
>seq45083
Length=200
Score = 104 bits (114), Expect = 1e-17
Identities = 111/145 (77%), Gaps = 4/145 (3%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATC--TG 34537
|| || | |||||| | || | ||||||||| ||||||||| ||||| ||||| |
Sbjct 186 CCACCACGAAGACGGAGAACGAGATGGAGAGTAGACTCCTTTTGGATGTTGTAATCACTC 127
Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597
|| ||| || | || |||||||| || ||||| || || |||||||||||||| || |
Sbjct 126 AAGGTG--CGACCATCCTCAAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGTG 69
Query 34598 GCACTCCCTCCTTGTCTGTGATCTT 34622
| | ||||||||||||| ||||||
Sbjct 68 GGATTCCCTCCTTGTCTTGGATCTT 44
>seq44178
Length=3241816
Score = 102 bits (112), Expect = 5e-17
Identities = 132/180 (73%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 34531 TAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGG 34590
|| ||||| || || || | ||||| || ||||| ||||||||||| | |||||| |||
Sbjct 924535 TAGTCTGAGAGAGTGCGGCCATCTTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGG 924594
Query 34591 TCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTC 34649
|| || || | |||||||||||| ||| ||| | ||| || | ||| |||||
Sbjct 924595 TCAGGTGGGATACCCTCCTTGTCT-TGAATTTTGGCTTTGACATTCTCAATGGTGTCACT 924653
Query 34650 GCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
| ||| || || | ||| || ||||| || || | || |||||||| |||||||||||
Sbjct 924654 GGGCTCGACCTCAAGGGTGATGGTTTTGCCCGTGAGGGTCTTCACAAAGATCTGCATGTT 924713
>seq38975
Length=485
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| || | |||||| | |||||| || | || |||||||||||||| ||||| |||
Sbjct 373 CCACCACGAAGACGGAGCACCAAGTGCAATGTCGATTCCTTTTGAATGTTGTAATCCGAA 314
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| |||| |||| || | || || || ||||| || || || |||||||| || ||
Sbjct 313 AGGGTTCTGCCGTCCTCCAACTGCTTTCCAGCAAAGATCAATCGTTGTTGGTCGGGTGGG 254
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| |||||||| ||| |||| || | |||||| || ||| || ||| || ||
Sbjct 253 ATACCCTCCTTATCTTGGATC-TTCGCCTTAACGTTATCAATAGTATCTGATGATTCTAC 195
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
||| | || || || || || || || || || || |||||||||||
Sbjct 194 TTCTAATGTAATGGTCTTTCCAGTCAAAGTCTTGACGAAAATCTGCAT 147
Score = 89.7 bits (98), Expect = 3e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548
||||| | |||||||| | || |||||||||||||| ||||| || || || ||
Sbjct 136 AGACGAAGGACCAAATGTAATGTTGATTCCTTTTGAATGTTGTAATCGGAGAGGGTGCGG 77
Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608
| || |||||||| ||||| ||||| || | ||| ||||| || || || | ||||||
Sbjct 76 CCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCC 17
Query 34609 TTGTCTGTGATCTT 34622
|||||| |||||
Sbjct 16 TTGTCTTGAATCTT 3
>seq21918
Length=9848887
Score = 98.7 bits (108), Expect = 6e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| ||||| | ||||| || || ||| ||| || || ||||| || || ||
Sbjct 7768437 CCACCTCTGAGACGGAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTAGTCAGAC 7768496
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || ||| | ||||| || || || || ||||| || || | ||| ||||| || ||
Sbjct 7768497 AGGGTGCGCCCATCTTCCAGCTGCTTTCCAGCAAAGATCAACCTCTGCTGGTCAGGAGGG 7768556
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| |||||||||||| |||| |||| || || | ||| ||||| | ||| ||
Sbjct 7768557 ATGCCCTCCTTGTCTTGGATC-TTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGAC 7768615
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|| | ||| || || || || || | || ||||| || ||||||||
Sbjct 7768616 CTCGAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 7768663
>seq52973
Length=211
Score = 96.9 bits (106), Expect = 2e-15
Identities = 150/212 (71%), Gaps = 2/212 (1%)
Strand=Plus/Minus
Query 34490 GACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCT 34549
|||||||||| | || || ||| || |||||||||||||| || | ||| |||||
Sbjct 211 GACGCAACACAAGGTGAAGGGTGGATTCTTTTTGAATGTTATAGTCAGCAAGCGTTCGTC 152
Query 34550 CGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCT 34609
| || || || || ||||| ||||| || || | ||| ||||| || || | |||||||
Sbjct 151 CATCCTCCAGCTGCTTACCAGCAAAGATCAACCTCTGCTGGTCAGGTGGGATACCCTCCT 92
Query 34610 TGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668
| ||| |||| || | || || | ||| ||||| ||||||||| |||| |||
Sbjct 91 TATCTTGGATC-TTAGCCTTGACATTGTCAATGGTGTCCGAGCTCTCCACCTCCAAGGTA 33
Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAAT 34700
|| || || || || | || || || || ||
Sbjct 32 ATAGTCTTTCCTGTGAGGGTCTTGACGAATAT 1
>seq37440
Length=3232823
Score = 82.4 bits (90), Expect = 5e-11
Identities = 157/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538
||| |||| ||||||| ||||| || || ||| ||| | || ||||| || |||||
Sbjct 1723547 GCCACCTCACAGACGCAGCACCAGGTGCAGGGTGGACTCTTCCTGGATGTTCTAGTCTGA 1723488
Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| | | | || || | ||||| || |||||||| | || ||| ||||| ||| |
Sbjct 1723487 GAGACTGCAGCCATCCTCCGGCTGTTTGCCCGCAAATATCAGACACTGCTGGTCAGGCAG 1723428
Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCA 34657
| |||||||||||| ||| || | ||| || | | | ||||| | |||||
Sbjct 1723427 GATGCCCTCCTTGTCTTGGAT-TTCGGCTTTGACATTCTCAGTGGTGTCAGTGGCCTCCA 1723369
Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
| || | ||| || || || || | | || |||||||| ||||||||
Sbjct 1723368 CCTCAAGGGTGATGGTCTTGCCCATGAGGGTGTTCACAAAGATCTGCAT 1723320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314209807542296
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