Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10-
28] 135,512 sequences; 2,899,552,139 total letters
Query= NC_028955.1
Length=197361
Score E
Sequences producing significant alignments: (Bits) Value
seq33013 361 7e-95
seq101721 116 5e-21
>seq33013
Length=879
Score = 361 bits (400), Expect = 7e-95
Identities = 493/681 (72%), Gaps = 24/681 (4%)
Strand=Plus/Minus
Query 184604 GGAGGTAACTTTGCTCAGAGTTCAATTACAATCAATGGATGGTTGAGAGACTTCTTATGG 184663
|| ||||| |||||||| ||| ||||||| || ||||||||||| ||||| || ||||||
Sbjct 677 GGTGGTAATTTTGCTCAAAGTGCAATTACTATTAATGGATGGTTAAGAGATTTTTTATGG 618
Query 184664 TCACAGTCAAGTCAAGTTCT-CAATAGTTATGGACAAGAC--ATCAGCATGTATGGTTTG 184720
|||| || ||||| | |||| | ||||| ||| || | |||||||
Sbjct 617 GCACAAGCATCACAAGTAATTCAATCAT-ATGGATCTTCTTTATCCGCTT--ATGGTTTA 561
Query 184721 CTATTTCTTGGAGCACATTTTGTATGGGCATTCAGTTTGATGTTCCTATGGAGTGGTAGA 184780
| || ||||| |||||||| | |||||||| ||||| |||||| ||| |||||| |
Sbjct 560 ATCTTCCTTGGTGCACATTTCATTTGGGCATTTAGTTTAATGTTCTTATTTAGTGGTCGT 501
Query 184781 GGATACTGGCAAGAGTTGATAGAGTCTATTGCTTGGGCACATAACAAATTAAAACTTGCA 184840
|| || |||||||| | || || || |||| |||||| ||||||||| | ||| |||||
Sbjct 500 GGCTATTGGCAAGAACTTATTGAATCAATTGTTTGGGCTCATAACAAAATTAAAGTTGCA 441
Query 184841 CCTACCATTCAACCAAGAGCAATGTCAATTACACAAGGACGTGCTGTTGGAGTTGCACAC 184900
|| | ||||| || ||||| | ||||| ||||| || ||||| ||| | |||||
Sbjct 440 CCAGCAATTCAGCCTCGAGCATTAAGTATTACTCAAGGTCGAGCTGTAGGATTAGCACAT 381
Query 184901 TTCTTACTTGGAGGTATTGCCACAACATGGGCATTCTTCTTTGCTCACCTTATCCCCTTA 184960
| || | || ||||||| ||||||||| | |||||||| || |||| | ||
Sbjct 380 TATCTATTAGGTGGTATTGGGACAACATGGTCTTTCTTCTTAGCAAGAATTATTTCTGTA 321
Query 184961 AGTTAAA--TCATGGC------TACTAA----AACAAAATTTCCAAAATTTAATCAAGAT 185008
| |||| | ||| || | | ||| |||||||||||||||| |||| |
Sbjct 320 GGATAAAATTAATGAGGTAAAATATTTATGGTAACTAAATTTCCAAAATTTAGCCAAGCT 261
Query 185009 TTGGCAAGTGATCCTACAACTAGGAGATTGTGGTATGGATTAGCAACTGCACATGACTTT 185068
|| ||| ||||| |||||||| ||| | |||| |||| | ||||| || ||||| |||
Sbjct 260 TTAGCACAAGATCCGACAACTAGAAGAATTTGGTTTGGAATTGCAACAGCGCATGATTTT 201
Query 185069 GAGAGTCATGACAATATGACAGAAGAGAAGTTATATCAAAAATTATTTGCTACACACTTT 185128
|| | ||||| ||||||||||| || |||||||||||| | |||||| | || ||
Sbjct 200 GAAACACATGATGGGATGACAGAAGAAAATTTATATCAAAAAATCTTTGCTTCGCATTTC 141
Query 185129 GGTCATCTTGCAATTATCTTTCTATGGGTTGCAGGTAATTTAATTCATATAGCATGGCAA 185188
|||||| | |||||||| ||||| ||| | ||||||||| | ||| | || ||||||
Sbjct 140 GGTCATTTAGCAATTATTTTTCTTTGGACATCTGGTAATTTATTCCATGTTGCTTGGCAA 81
Query 185189 GGTAACTTTGAACA---GTTTGTAGCAGACCCACAACATGTGATACCTATAGCACATAGA 185245
|||||||||||||| || | | | |||| | | || | ||| || || || | |
Sbjct 80 GGTAACTTTGAACAATGGTCTTT---AAACCCGTTAAAAGTAAAACCAATTGCCCACACA 24
Query 185246 ATATGGGATCCTCATTTTGGT 185266
|| |||||||| |||||||||
Sbjct 23 ATTTGGGATCCACATTTTGGT 3
>seq101721
Length=375
Score = 116 bits (128), Expect = 5e-21
Identities = 111/142 (78%), Gaps = 0/142 (0%)
Strand=Plus/Minus
Query 188637 ACCTGTCACAGTTCAGTATCCTTATGAAAAATTAATACCCTCAGAGAGATATAGAGGGAG 188696
||| || || |||| ||||||||||||||||| || | |||||| | | | | || |
Sbjct 196 ACCCGTAACTATTCAATATCCTTATGAAAAATTGATCACATCAGAGCGTTTTCGCGGTCG 137
Query 188697 GATACACTATGAGTTTGATAAATGTATTGCTTGTGAAGTATGTGTAAGAGTTTGTCCTAT 188756
|| |||| ||| ||||||||||| |||||||||||||||||||| | || || |||||
Sbjct 136 AATCCACTTTGAATTTGATAAATGCATTGCTTGTGAAGTATGTGTTCGTGTATGCCCTAT 77
Query 188757 TAATTTACCTGTAGTTGATTGG 188778
|| |||| || |||||||||
Sbjct 76 AGATCTACCCGTTGTTGATTGG 55
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 630357625465920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |