Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Rhinopithecus_20roxellana_20[refseq_20GCF_5F000769185.1_202014-10- 28] 135,512 sequences; 2,899,552,139 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq33539 163 7e-35 seq68558 159 8e-34 seq42510 154 4e-32 seq39797 154 4e-32 seq52973 152 1e-31 seq44056 147 5e-30 seq44074 145 2e-29 seq36884 145 2e-29 seq21918 145 2e-29 seq17706 140 8e-28 seq42152 136 9e-27 seq112392 132 1e-25 seq83510 129 1e-24 seq97443 123 6e-23 seq69637 122 2e-22 seq1057 116 9e-21 seq45083 111 4e-19 seq43693 109 1e-18 seq27054 109 1e-18 seq31443 107 5e-18 seq8680 107 5e-18 seq41218 104 6e-17 seq43608 91.5 4e-13 >seq33539 Length=658333 Score = 163 bits (180), Expect = 7e-35 Identities = 171/224 (76%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | |||||||||||||| || ||||| || || |||||||||||||| ||| Sbjct 236825 AAAATGC---AGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGTTGAA 236769 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 |||||| || || || || || || ||||| ||||| || |||||||| ||||| Sbjct 236768 CCCTCAGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCT 236709 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || |||||| |||| ||||| || || || || || ||||||||| | ||| | | || Sbjct 236708 GATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGAC 236649 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || | ||||| || || || || |||||||| |||||||| Sbjct 236648 TACAATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 236605 >seq68558 Length=238 Score = 159 bits (176), Expect = 8e-34 Identities = 150/191 (79%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| ||||| ||||| || || || |||||||| |||||||| ||||| ||| Sbjct 47 CAGATCTTCGTCAAAACCCTCACGGGCAAGACCATCACCCTAGAGGTGGAGAGCTCCGAC 106 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||||| |||||||| ||||| || || ||||| ||||| Sbjct 107 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGGATTCCCCCGGATCAGCAG 166 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||||||||| ||||| || || || | || || ||||| || ||| || Sbjct 167 CGTTTGATCTTCGCCGGAAAGCAGCTGGAGGACGGCCGTACCCTAGCCGACTACAACATC 226 Query 178104 CAAAAAGAATC 178114 || || || || Sbjct 227 CAGAAGGAGTC 237 >seq42510 Length=1301382 Score = 154 bits (170), Expect = 4e-32 Identities = 169/224 (75%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | |||||||||||||| || || || || || |||||||||||||| ||| Sbjct 87354 AAAATGC---AGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAA 87298 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||| || || || || || || || ||||| ||||| || |||||||| ||||| Sbjct 87297 CCCTCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCT 87238 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || |||||| |||| ||||| || || || || || ||||||||| | ||| | | || Sbjct 87237 GATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGAC 87178 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || | ||||| || || || || |||||||| |||||||| Sbjct 87177 TACAATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 87134 >seq39797 Length=2305578 Score = 154 bits (170), Expect = 4e-32 Identities = 169/224 (75%), Gaps = 3/224 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | |||||||||||||| || || || || || |||||||||||||| ||| Sbjct 1756923 AAAATGC---AGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAA 1756979 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||| || || || || || || || ||||| ||||| || |||||||| ||||| Sbjct 1756980 CCCTCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCT 1757039 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || |||||| |||| ||||| || || || || || ||||||||| | ||| | | || Sbjct 1757040 GATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGAC 1757099 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || | ||||| || || || || |||||||| |||||||| Sbjct 1757100 TACAATATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 1757143 >seq52973 Length=211 Score = 152 bits (168), Expect = 1e-31 Identities = 158/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACC 177986 || ||||| || || ||||||||||| || || ||| | |||||||| ||||| |||||| Sbjct 1 ATATTCGTCAAGACCCTCACAGGAAAGACTATTACCTTGGAGGTGGAGAGCTCGGACACC 60 Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046 || || || ||||| ||||| || || || || || ||||| || |||||||| | Sbjct 61 ATTGACAATGTCAAGGCTAAGATCCAAGATAAGGAGGGTATCCCACCTGACCAGCAGAGG 120 Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106 | ||||| || || || ||||| || |||||| | || ||||| || |||||| | ||| Sbjct 121 TTGATCTTTGCTGGTAAGCAGCTGGAGGATGGACGAACGCTTGCTGACTATAACATTCAA 180 Query 178107 AAAGAATCAACACTGCATCTTGTTTTG 178133 |||||||| || || || ||||| ||| Sbjct 181 AAAGAATCCACCCTTCACCTTGTGTTG 207 >seq44056 Length=626226 Score = 147 bits (162), Expect = 5e-30 Identities = 161/212 (76%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || || || || || | ||| || ||||| |||||||| ||||| || || ||| Sbjct 245010 CAGATCTTTGTAAAGACCCACACGGGCAAAACCATCACCCTTGAGGTCGA--GCCCAGTG 244953 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| |||||||||||| || ||||| ||||| || || ||||| || ||||||| Sbjct 244952 ACACCATTGAGAACGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCAGC 244893 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || || || ||||| |||||||| |||||||| | ||||| | || || ||| Sbjct 244892 AGCGTCTGATATTTGCCGGCAAACAGCTGGAAGATGGCCGCACTCTCTCAGACTACAACA 244833 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTG 178133 |||| ||||| || || ||||| || || ||| Sbjct 244832 TCCACAAAGAGTCCACCCTGCACCTGGTGTTG 244801 >seq44074 Length=2336235 Score = 145 bits (160), Expect = 2e-29 Identities = 167/224 (75%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | |||||||||||||| || || || || || ||||| |||||||| ||| Sbjct 1652955 AAAATGC---AGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACTCTCGAGGTTGAA 1652899 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 |||||| || || || || || || ||||| ||||| || |||||||| ||||| Sbjct 1652898 CTCTCAGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCT 1652839 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 || |||||| |||| ||||| || || || || || ||||||||| ||| | | || Sbjct 1652838 GATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACATACTTTGTCTGAG 1652779 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || | ||||| || || || || ||||||| |||||||| Sbjct 1652778 TACAATATTCAAAAGGAGTCTACTCTTCATCTTGCGTTGAGACT 1652735 >seq36884 Length=899181 Score = 145 bits (160), Expect = 2e-29 Identities = 167/224 (75%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| | |||||||||| ||| || ||||| || || |||||||||||||| ||| Sbjct 628641 AAAATGC---AGATTTTCGTGATAACCCTTACAGGGAAGACCATCACCCTCGAGGTTGAA 628585 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 ||||||||| || || || || | ||||| |||| || |||||||| ||||| Sbjct 628584 CCCTCAGACACAATAGAAAATGTATAGGCCAAGATCCAGGTTAAGGAAGGAATTCCTCCT 628525 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 | ||||| |||| ||||| || || || || || ||||||||| | ||| | | || Sbjct 628524 GGTCAGCAGAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGAC 628465 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || | |||||||| || || || ||| |||| |||||||| Sbjct 628464 TACAATATTCAAAAAGAGTCTACTCTTCATTTTGTGTTGAGACT 628421 >seq21918 Length=9848887 Score = 145 bits (160), Expect = 2e-29 Identities = 166/221 (75%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||||||||| || || ||| Sbjct 7768888 CAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCGA--GCCCAGTG 7768831 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||||||||| ||||| |||||| ||||| || ||||| || ||||| ||||||| Sbjct 7768830 ACACCATCGAGAATGTCAAGGCAAAGATCCAGGATAAGGAAGGCATTCCTCCTGACCAGC 7768771 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| || ||||| ||||| |||||||| | || || | || || ||| Sbjct 7768770 AGAGGTTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 7768711 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||| || || ||||| || || | | |||||| Sbjct 7768710 TCCAGAAAGAGTCCACCCTGCACCTGGTGCTCCGTCTCAGA 7768670 Score = 143 bits (158), Expect = 6e-29 Identities = 158/207 (76%), Gaps = 5/207 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || || |||||||| || || || || || || |||||||||||||| | ||| || | Sbjct 7768204 CAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCG--AGCCCAGCG 7768147 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| ||||| |||||| || || || ||||| |||||||| ||||||| Sbjct 7768146 ACACCATTGAGAATGTCAAGGCAAAGATCCAAGATAAGGAAGGCATCCCTCCTGACCAGC 7768087 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| || || |||||||| ||||||||| | || || | || || ||| Sbjct 7768086 AGAGGTTGATCTTTGCTGGGAAACAGCTGGAAGATGGACGCACCCTGTCTGACTACAACA 7768027 Query 178102 TCCAAAAAGAATCAACACTGCATCTTG 178128 |||| ||||| || || ||||| |||| Sbjct 7768026 TCCAGAAAGAGTCCACTCTGCA-CTTG 7768001 Score = 141 bits (156), Expect = 2e-28 Identities = 165/221 (75%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || || |||||||| || || || || || || |||||||||||||| | ||| || | Sbjct 7768432 CAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCG--AGCCCAGTG 7768375 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| ||||| |||||| || ||||| ||||| || ||||| ||||||| Sbjct 7768374 ACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATTCCTCCTGACCAGC 7768315 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| || ||||| ||||| |||||||| | || || | || || ||| Sbjct 7768314 AGAGGTTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 7768255 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||| || || ||||| || || | | |||||| Sbjct 7768254 TCCAGAAAGAGTCCACCCTGCACCTGGTGCTCCGTCTCAGA 7768214 Score = 141 bits (156), Expect = 2e-28 Identities = 165/221 (75%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || || |||||||| || || || || || || |||||||||||||| | ||| || | Sbjct 7768660 CAGATCTTCGTGAAGACCCTGACTGGCAAGACCATCACCCTCGAGGTCG--AGCCCAGTG 7768603 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 ||||||| ||||| ||||| |||||| || ||||| || || |||||||| ||||||| Sbjct 7768602 ACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAGGGCATCCCTCCTGACCAGC 7768543 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | | ||||| || ||||| ||||| |||||||| | || || | || || ||| Sbjct 7768542 AGAGGTTGATCTTTGCTGGAAAGCAGCTGGAAGATGGGCGCACCCTGTCTGACTACAACA 7768483 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| ||||| || || ||||| || || | | |||||| Sbjct 7768482 TCCAGAAAGAGTCCACCCTGCACCTGGTGCTCCGTCTCAGA 7768442 >seq17706 Length=950375 Score = 140 bits (154), Expect = 8e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 177929 TTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCAT 177988 ||||||||||||||| | || || || |||||||||||||| ||| ||| || | || Sbjct 545288 TTTCGTGAAAACTCTTATGGGGAAGACCATCACCCTCGAGGTTGAACCCTCGGATATGAT 545229 Query 177989 CGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACT 178048 || || || || ||||| ||||| || |||||||| ||||| || |||||| |||| Sbjct 545228 AGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCAAAGACT 545169 Query 178049 TATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||| || || || || || |||| |||| | ||| | | || || || | ||||| Sbjct 545168 GATCTTTGCTGGCAAGCAACTGGAAGGTGGACGTACTTTGTCTGACTACAATATTCAAAA 545109 Query 178109 AGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || || || |||||||| |||||||| Sbjct 545108 GGAGTCTACTCTTCATCTTGTGTTGAGACT 545079 >seq42152 Length=979470 Score = 136 bits (150), Expect = 9e-27 Identities = 156/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||| |||||||| || ||| Sbjct 315509 CAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTGGAGGTGGA--GCCCAGTG 315452 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||||||||| || || || ||||| || || |||||||| ||||| || ||||||| Sbjct 315451 ACACCATCGAAAATGTGAAGGCCAAGATCCAAGATAAAGAAGGCATCCCCCCCGACCAGC 315392 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || ||||| |||||||| | |||||| | || || ||| Sbjct 315391 AGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAACA 315332 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| || || || || ||||| || || Sbjct 315331 TCCAGAAGGAGTCGACCCTGCACCTGGT 315304 Score = 132 bits (146), Expect = 1e-25 Identities = 172/235 (73%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969 |||| ||||||| | || |||||||| || || || || || || |||||||| |||| Sbjct 315976 AGGTCAAAATGC---AGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACCCTTGAGG 315920 Query 177970 TGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 |||| || ||| |||||||||| || || || || || ||||| || ||||| || Sbjct 315919 TGGA--GCCCAGTGACACCATCGAAAATGTGAAGGCCAAAATCCAGGATAAGGAAGGCAT 315862 Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087 || || |||||||| | || ||||| || || || ||||| |||||||| | ||||| Sbjct 315861 TCCCCCCGACCAGCAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCT 315802 Query 178088 TGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 | | || || ||| |||| || || || || ||||| || || || | || ||| Sbjct 315801 TTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGA 315747 Score = 127 bits (140), Expect = 5e-24 Identities = 162/221 (73%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || || |||||||| |||||||| || ||| Sbjct 315737 CAGATCTTCGTGAAGACCCTGACCGGCAAGACTATCACCCTGGAGGTGGA--GCCCAGTG 315680 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||||||||| || || || || || ||||| || ||||| || || || ||||||| Sbjct 315679 ACACCATCGAAAATGTGAAGGCCAAAATCCAGGATAAGGAAGGCATTCCCCCCGACCAGC 315620 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | | || ||||| || || || ||||| |||||||| | |||||| | || || ||| Sbjct 315619 AGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAACA 315560 Query 178102 TCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 |||| || || || || ||||| || || || | || ||| Sbjct 315559 TCCAGAAGGAGTCGACCCTGCACCTGGTCCTGCGTCTGAGA 315519 >seq112392 Length=498 Score = 132 bits (146), Expect = 1e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||| || || || | || || || || |||||||| ||||| || || || || Sbjct 344 CAGATTTTTGTTAAGACCTTGACTGGGAAGACCATCACCCTGGAGGTTGAGAGTTCGGAT 285 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| ||||||||||||||| || || ||||| || ||||| || Sbjct 284 ACCATTGATAATGTGAAAGCAAAGATTCAGGACAAGGAGGGGATCCCCCCTGACCAACAG 225 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || ||||||||||| || ||||| | ||| | ||||| ||||| | Sbjct 224 CGGTTGATCTTTGCTGGAAAACAGCTGGAGGATGGCCGTACTTTGGCCGACTATAATATT 165 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 164 CAGAAGGAGTCCACCCTCCACCTTGT 139 >seq83510 Length=277 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||||||||| || || || || || |||||||| ||||| || || || Sbjct 9 CAGATCTTCGTGAAAACCCTGACGGGGAAGACCATCACCCTTGAGGTCGAGCCTTCCGAT 68 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||| |||||||| ||||| || ||||| |||||||| Sbjct 69 ACTATTGAAAATGTGAAGGCGAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAGCAG 128 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||| ||||| ||||| || ||||| || ||||| | || || | || || ||| || Sbjct 129 CGACTGATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGCACCCTCTCTGACTACAACATC 188 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || ||||| || || || || || || Sbjct 189 CAGAAAGAGTCCACCCTTCACCTGGT 214 >seq97443 Length=343 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || | || || || || |||||| | ||||| || ||||| || Sbjct 28 CAGATCTTTGTCAAGACCTTGACTGGGAAGACCATCACCTTGGAGGTTGAGAGCTCTGAT 87 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||| |||||||| ||||| ||||| || ||||||||| Sbjct 88 ACTATTGATAATGTGAAGGCCAAGATACAGGACAAGGAAGGGATCCCACCAGACCAGCAA 147 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || ||||| || ||||| |||||| | || ||||| || || Sbjct 148 CGTTTGATCTTTGCTGGGAAGCAGCTTGAGGATGGGAGGACTTTGGCGGATTACAATATC 207 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 208 CAGAAGGAGTCTACCCTTCACCTTGT 233 >seq69637 Length=240 Score = 122 bits (134), Expect = 2e-22 Identities = 120/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || || || || || || ||||| || ||||| ||| |||||| Sbjct 73 CAAATCTTTGTCAAGACCCTGACTGGTAAGACCATCACACTTGAGGTCGAACCTTCAGAC 132 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| || || || || || || ||||||||||||||||| || |||||||| Sbjct 133 ACAATCGAAAATGTGAAGGCCAAAATCCAAGACAAAGAAGGAATCCCACCTGACCAGCAG 192 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGG 178078 || || ||||||||||| || ||||| |||||||| Sbjct 193 CGTCTGATCTTCGCCGGTAAGCAGCTGGAAGATGG 227 >seq1057 Length=1145873 Score = 116 bits (128), Expect = 9e-21 Identities = 148/202 (73%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG--ACACCA 177987 |||||||| || || || | || || |||||||| || ||||| || ||| |||||| Sbjct 555223 TTCGTGAAGACCCTGACTGACAAGACCATCACCCTTGATGTGGA--GCCCAGTGACACCA 555166 Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047 |||| || || || || |||||||| || ||||| ||| || ||||||| | | Sbjct 555165 TCGAAAATGTGAAGGCCAATATTCAGGATAAGGAAGGCATCTTCCCCAACCAGCAGAGGC 555106 Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAA 178107 | ||||| || || | ||||| |||||||| | |||||| | || || ||| |||| | Sbjct 555105 TCATCTTTGCAGGCATGCAGCTGGAAGATGGCCGCACTCTTTCTGACTACAACATCCAGA 555046 Query 178108 AAGAATCAACACTGCATCTTGT 178129 ||||||| || ||||| || || Sbjct 555045 AAGAATCGACCCTGCACCTGGT 555024 >seq45083 Length=200 Score = 111 bits (122), Expect = 4e-19 Identities = 128/170 (75%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 177962 CCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGA 178021 ||||||||| ||| || || |||||||| |||||||| ||||| || ||||| || Sbjct 1 CCTCGAGGTTGAATCTTCCGATACCATCGACAACGTCAAGGCCAAGATCCAAGACAAGGA 60 Query 178022 AGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAG 178081 |||||||| || ||||| || || | || ||||||||||| || || || ||||| | Sbjct 61 GGGAATCCCACCCGACCAACAGCGTTTGATTTTCGCCGGAAAGCAACTTGAGGATGGTCG 120 Query 178082 GACTCTTG-CCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130 || |||| ||||| ||| ||||||| || || || || ||||| ||| Sbjct 121 CAC-CTTGAGTGATTACAACATCCAAAAGGAGTCTACTCTCCATCTCGTT 169 >seq43693 Length=2839110 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 11/215 (5%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||||||||||| || ||||| || || |||||||| ||||| ||| || | Sbjct 374542 CAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACCCTTGAGGTTGAACCCTTGAAT 374601 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || | || || || || || || ||||| || |||||| | ||||| || |||||| Sbjct 374602 ACAACAGAAAATGTAAAGGCCAATATCCAGGATAAGGAAGGAGTTCCTCCTGATCAGCAA 374661 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || || || | ||||||| ||| || || ||| | Sbjct 374662 AGACTGATCTTTGCTGGCAAGCAATTGGAAGATG-------TCT----GACTACAACATT 374710 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || || || || |||||||| |||||||| Sbjct 374711 CAAAAGGAGTCTACTCTTCATCTTGTGTTGAGACT 374745 >seq27054 Length=1005967 Score = 109 bits (120), Expect = 1e-18 Identities = 161/223 (72%), Gaps = 9/223 (4%) Strand=Plus/Minus Query 177910 AGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGG 177969 |||| ||||||| | || |||||||| | || || | || || || |||| |||| Sbjct 364402 AGGTCAAAATGC---AGATCTTCGTGAAGAGCCTTACCTGCAAGACCATTGCCCTTGAGG 364346 Query 177970 TGGAAAGCTCAG--ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 |||| || ||| |||||||||| || || || ||||| ||||| || ||||| || Sbjct 364345 TGGA--GCCCAGTGACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCAT 364288 Query 178028 CCCTCCGGACCAGCA-ACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTC 178086 | || || ||||| ||| |||| ||| || | || ||| | |||||||| | |||| Sbjct 364287 TCTCCCCGAGCAGCAGACG-CTTAACTTTGCAGTCAAGCAGGTGGAAGATGGCCGCACTC 364229 Query 178087 TTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || | || ||| || |||| ||||| || || ||||| ||||| Sbjct 364228 TTTCTGACTATGACATCCAGAAAGAGTCGACCCTGCACCTTGT 364186 >seq31443 Length=2148293 Score = 107 bits (118), Expect = 5e-18 Identities = 154/215 (72%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || |||||| | ||| | || || || || || ||||||||||||| ||| | || Sbjct 2078570 CAGATTTTCATAAAATC-CTTACGGGGAAGACTGTCACCCTCGAGGTCGAACCCATGGAT 2078512 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||| ||||| || ||||||| ||||| || |||| Sbjct 2078511 ACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGCAAGGAATTCCTCCTGATGAGCAG 2078452 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 |||| ||||| || || || || || ||||||||| | ||| | | || || ||| | Sbjct 2078451 AGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTGT--CTGACTACAACATT 2078394 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 ||||| || | || || |||||||| |||||||| Sbjct 2078393 CAAAAGGAGCCCACTCTTCATCTTGTGTTGAGACT 2078359 >seq8680 Length=483526 Score = 107 bits (118), Expect = 5e-18 Identities = 148/205 (72%), Gaps = 9/205 (4%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCA--G 177981 || || || ||||| || |||||||| || | |||||||||||||| | ||| || | Sbjct 315968 CAGATCTTTGTGAAGACCCTCACAGGTAAGATCATCACCCTCGAGGTCG--AGCCCAGTG 316025 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||||| ||||||||||| || ||||| ||||| || || ||||| | ||||||| Sbjct 316026 ACACCACTGAGAACGTCAAGGCCAAAATTCAAGACAAGGAGGGCATCCCACTTGACCAGC 316085 Query 178042 AACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACG 178101 | || || || || || || |||||||| || | | |||||| | || | ||| Sbjct 316086 AGCGTCTGATATTTGCGGGCAAACAGCTGGA-----GCCGCACTCTTTCAGACTGCAACA 316140 Query 178102 TCCAAAAAGAATCAACACTGCATCT 178126 |||| ||||| || | ||||| || Sbjct 316141 TCCAGAAAGAGTCCAACCTGCACCT 316165 >seq41218 Length=1260099 Score = 104 bits (114), Expect = 6e-17 Identities = 135/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 177928 TTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCA 177987 ||||| ||||||| || |||||||| || ||||||||||||| ||| ||| || || Sbjct 559046 TTTTCCTGAAAACCCTTACAGGAAAGACCATCACCCTCGAGGCTGAACCCTCGGATACGG 558987 Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047 | || | | ||| ||||| | || || |||||||| ||||| | |||||| ||| Sbjct 558986 TAGAAGATGGAAAAGCCAAGATCCGGGGTAAGGAAGGAATTCCTCCTAATCAGCAAAGAC 558927 Query 178048 TTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAA 178107 | ||||| | || || || || ||||||||| | ||| | | || || ||| | |||| Sbjct 558926 TGATCTTTGTTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTACAACATTCAAA 558867 Query 178108 AAGAATC 178114 | || || Sbjct 558866 AGGAGTC 558860 >seq43608 Length=2410137 Score = 91.5 bits (100), Expect = 4e-13 Identities = 144/203 (71%), Gaps = 5/203 (2%) Strand=Plus/Minus Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACA-- 177984 || || ||||| || |||||||| || || ||| |||| ||||| || || ||| | Sbjct 2063576 ATCTTTGTGAAGACCCTCACAGGCAAGACCATCGCCCTTGAGGTCGA--GCCCAGTGATG 2063519 Query 177985 CCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAAC 178044 ||| ||||| | |||| || ||||||||||| | || |||| || |||||||| Sbjct 2063518 CCACTGAGAATGCCAAAGCCAAAATTCAGGACAAGTAGGGCATCCTACCTGACCAGCAGT 2063459 Query 178045 GACTTAT-CTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 | || || || | || |||||||| | ||||| | ||||| | || || ||| || Sbjct 2063458 GTCTGATAATTTGAGGGCAAACAGCTGCAGGATGGCCGCACTCTCTCAGACTACAACATC 2063399 Query 178104 CAAAAAGAATCAACACTGCATCT 178126 || ||||| || || ||||| || Sbjct 2063398 CAGAAAGAGTCCACCCTGCACCT 2063376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1201641224713328