Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq37 217 2e-51
>seq37
Length=19344684
Score = 217 bits (240), Expect = 2e-51
Identities = 562/851 (66%), Gaps = 8/851 (1%)
Strand=Plus/Plus
Query 16694 TTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGGATTA 16753
|| || || |||||||| || || || || || ||||||||||| || ||||| |||||
Sbjct 211337 TTCTCAAAGAAGTTAGTGTTTCCTTCCAGTGAAATATTCTCCATAAAGTCAAATGGATTC 211396
Query 16754 G-TAG-CTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATT 16811
|| ||||||| | | | |||||||| || | ||| || || ||||| |
Sbjct 211397 TCTACTCTGAAAACCCTGCTAA--AACCCAGTTCCAGCATAAGTCTGTCTGCCACAAACT 211454
Query 16812 CTATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCG 16871
| || ||||| ||||| ||| ||||| || || || || || | || || |
Sbjct 211455 CAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCTTCACAGGCAAGGCCTCAG 211514
Query 16872 TCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAACTCGTTCCTCGG 16931
| | || || || || ||| || |||| || |||| ||||| |
Sbjct 211515 TAAGGAACTCCTGTTCCATCCGAACAGCACTGATAATTATTTCTCTTACTCTCTCCTCTG 211574
Query 16932 ACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGT 16991
| ||| | ||| | ||||| |||||||| || |||||||| || ||||| ||||| |
Sbjct 211575 ATGGTTTGTGTACTTGGTGTTTGAACATCAGGCAAGCGAAATCACAGTGTAAACCCTCAT 211634
Query 16992 CTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACC 17051
|||||| ||||||| ||||||||||| | || |||||| |||||||||||| | ||
Sbjct 211635 CTCTGCCAGTAAGTTCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCC 211694
Query 17052 AAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTA 17111
| ||||| | || || || ||||||||||| || || || || | ||||| || |
Sbjct 211695 AGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTGCAA 211754
Query 17112 ATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTT 17171
|||| | || || || ||||||| | || ||| | |||| || || || |
Sbjct 211755 CGTGTTCACCATAGGTAGCCTCTTTGTCCCCAACCCAGAGCAAGGCCCAATCTGCCTTCT 211814
Query 17172 GCTTTATGCAATCCATCGTTTCTATGGCCTT--AAATAATTTCTCTTTTTCCTGTAGGTC 17229
||| | ||| ||||||||| || || || | | || ||| | |||| | | ||
Sbjct 211815 TCTTGACACAAGGCATCGTTTCAATAGCATTGAAGAGAAATTCCC--TTTCGTTGGGATC 211872
Query 17230 GATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTAT 17289
|||| || || || || || || || || ||||| || |||||||| | |||||| ||
Sbjct 211873 TTTTATGTAAGTGTCAATAAGGAGACTATATATTTCAGAATGTATGTTTTTCATGGCCAT 211932
Query 17290 CTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGC 17349
|| || || || || || ||||||| | || |||||||| | ||||| ||| |
Sbjct 211933 TTGGAAGCCATAGAAACAGTGGGCTTCTGTGATCTGAACTTCTTGGCTAAATCGCTCCAC 211992
Query 17350 TAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAA 17409
| ||||| || || ||||| | || || || || || |||| | || || ||
Sbjct 211993 CAAGTTTTCATTTACTATGCCATAACTTGCTGCAAAGAAAGCCAGAACGTGGGATATAAA 212052
Query 17410 ATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTC 17469
||| | | || || | || ||||| | | || ||||| | ||||| ||
Sbjct 212053 GTATCTCCCCTCGGGCTTCAGGGATTCCCAGTGCCAAACGTCCTTGGACAGGTCCACCTC 212112
Query 17470 TTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATATCATTGTATTG 17529
| || |||||| || ||| | |||| ||||| | | ||| ||||| ||| |
Sbjct 212113 CTTGGTGGTCCAGAAGGAGGCCTCCCCCTTCTTATATGTCTGCCAGATATCGGGGTACTC 212172
Query 17530 TATGGGGAATA 17540
||||||||||
Sbjct 212173 GATGGGGAATA 212183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517528223406480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |