Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20 2011-11-17] 2,686 sequences; 2,608,588,537 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq47 580 8e-161 seq30 536 9e-148 seq126 518 2e-142 seq232 407 1e-108 seq273 396 2e-105 seq111 387 1e-102 seq18 302 3e-77 seq31 235 4e-57 seq8 212 5e-50 seq1 163 2e-35 seq2 147 2e-30 seq22 100 2e-16 >seq47 Length=17121399 Score = 580 bits (642), Expect = 8e-161 Identities = 468/566 (83%), Gaps = 0/566 (0%) Strand=Plus/Minus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| ||||| ||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct 7276788 AAAACACATTCATATTAATCATTCTTCTCATATACTTCAAATTTGTACTTAATGCCTTTC 7276729 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || ||| ||| |||||| |||||||||| || |||||| |||||||| | | Sbjct 7276728 TCCTCCTGGGCATCAGAGGGAACACCTGGATATTCTGGCAGAAGTTTATATTTCTCCAAA 7276669 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| |||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||| Sbjct 7276668 TCAATTTCTGGAAAAAACGTGTCACTTTCAAAGTCCTGCATGATCCTTGTCACAAACAGT 7276609 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 ||||||| || ||| | | ||| ||||| ||||| |||||||| || ||||||||||| Sbjct 7276608 TTAAGATGGCCTGGGTGATCCATGGCTTCCTTATAAACAGAACTGCCACCAATTATCCAA 7276549 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 | ||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| | | Sbjct 7276548 ATCATGTCTACTTTATTTGCTAATTCTGGTTGTTCAGTAAGTTTTAAGGCATCATCCAGA 7276489 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 || | || | ||||||||||| |||||| ||||||| |||||| |||||||||| ||| Sbjct 7276488 CTTCTGGCCAGAAAATGAGCTCCTTGTGGAGGCTCCTTGAGTTCCCTGCTGAGAACTACA 7276429 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374 |||||||| | ||||||| || |||||||||||||| |||||||| ||||| ||||| Sbjct 7276428 TTAATTCTATCCCTTAAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACCC 7276369 Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434 || ||||| ||||||||||||||| ||| ||||| || || |||||||| |||||||| Sbjct 7276368 ATGATCACCAAATTCTGTTTATCTTCTACTGAAGAGGTTGTGGTCATTCTCTGGAAATGC 7276309 Query 4435 TTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTT 4494 | || |||||| | | ||||| |||| || ||| | ||||| |||||||||| Sbjct 7276308 CTGAATTCATTCCTGAACGGCGGCCAGGGCAGGTCACCGTTCTTGCCGGTGCCCATGTTC 7276249 Query 4495 TGAGCTACAGCAACAATGCAGTTTAG 4520 || | ||||| || ||||||||||| Sbjct 7276248 TGGGACACAGCGACGATGCAGTTTAG 7276223 >seq30 Length=22521080 Score = 536 bits (594), Expect = 9e-148 Identities = 461/570 (81%), Gaps = 0/570 (0%) Strand=Plus/Plus Query 3951 CTGTAAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACT 4010 ||| ||||||| || ||||||| ||||||||||||||||||||| ||||||||||| | Sbjct 9522659 CTGGAAAAGACTTTCATATTAATCATTCTTCTCATATACTTCAAACTTGTACTTAATGCC 9522718 Query 4011 TTTCTCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTC 4070 |||||| || || |||| ||| ||||||| ||| |||||| || |||| |||||||||| Sbjct 9522719 TTTCTCCTCCTGGACATCAGAGAGAACACCTGGGTATTCTGGCAGAAGTCTGTATTTCTC 9522778 Query 4071 TAGATCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAA 4130 | || || ||| |||||||| ||||||| ||||||||| |||||||| || |||||||| Sbjct 9522779 CAAATAAATTTCCGGAAAAAACGTGTCACTTTCAAAGTCCTGCATGATTCTTGTCACAAA 9522838 Query 4131 CAGTTTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTAT 4190 |||||||| | || ||| | |||||| ||||| ||||| |||||||| || |||||||| Sbjct 9522839 TAGTTTAAGGTGGCCTGGGTGACTCATGGCTTCCTTATAAACAGAACTGCCACCAATTAT 9522898 Query 4191 CCAGACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATC 4250 ||| | ||| |||||||||||||||||||| || ||||| ||||| ||||| |||||||| Sbjct 9522899 CCAAATCATATCTACTTTATTTGCTAATTCCGGTTGTTCAGTAAGGTTTAATGCATCATC 9522958 Query 4251 TAAACTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAAC 4310 | ||| | || | ||||||||||| |||||| | ||||| ||||| |||||||||| Sbjct 9522959 CAGACTTCTGGCAAGAAAATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAAC 9523018 Query 4311 AACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTT 4370 | ||||||||| | |||||||| || |||||||||||||| |||||||| |||| | | Sbjct 9523019 CAAATTAATTCTATCCTTTAAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTGTCT 9523078 Query 4371 ACCCATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAA 4430 |||||||||||| | |||||||||| || || ||||| || ||||||||||| ||||| Sbjct 9523079 ACCCATAATCACCAGATTCTGTTTACCTTCTATTGAAGAAGTTGTAGTCATTCTCTGGAA 9523138 Query 4431 ATGTTTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCAT 4490 || | || ||||| | ||| ||||| |||| || || | ||||| || ||||| Sbjct 9523139 ATACCTGAATTCATTTCTGAGTGGCGGCCAGGGCAGGTCCCCCTTCTTGCCGATACCCAT 9523198 Query 4491 GTTTTGAGCTACAGCAACAATGCAGTTTAG 4520 ||| || | ||||| || ||||||||||| Sbjct 9523199 GTTCTGGGACACAGCGACGATGCAGTTTAG 9523228 >seq126 Length=6219632 Score = 518 bits (574), Expect = 2e-142 Identities = 461/578 (80%), Gaps = 14/578 (2%) Strand=Plus/Minus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| ||||| ||||||| |||||||||||||||||| |||||||||||||| |||| Sbjct 45494 AAAACACATTCATATTAATCATTCTTCTCATATACTTCGAATTTGTACTTAATGTCTTTC 45435 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || ||| ||| |||||| |||||||||| || |||||| |||||||| Sbjct 45434 TCCTCCTGGGCATCAGAGGGAACACCTGGATATTCTGGCAGAAGTTTATATTTCTCCCAG 45375 Query 4075 TCAAATTCTGGAAAAAAG-GTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAG 4133 |||| |||||||||||| ||||||| ||||||||| | ||||||||| ||||||||||| Sbjct 45374 TCAATTTCTGGAAAAAAACGTGTCACTTTCAAAGTCCTACATGATCCTTGTCACAAACAG 45315 Query 4134 TTTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCA 4193 |||||||| || ||| | | ||| ||||| ||||| |||||||| || ||||||||||| Sbjct 45314 TTTAAGATGGCCTGGGTGATCCATGGCTTCCTTATAAACAGAACTGCCACCAATTATCCA 45255 Query 4194 GACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAA 4253 | ||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| | Sbjct 45254 AATCATGTCTACTTTATTTGCTAATTCTGGTTGTTCAGTAAGTTTTAAGGCATCATCCAG 45195 Query 4254 ACTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAAC 4313 ||| | || | ||||||||||| |||| |||| |||||||||| || Sbjct 45194 ACTTCTGGCCAGAAAATGAGCTCCTTGTG-------------TTCCCTGCTGAGAACTAC 45148 Query 4314 ATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACC 4373 ||||||||| | |||||||| || |||||||||||||| |||||||| ||||| |||| Sbjct 45147 ATTAATTCTATCCTTTAAAGGTCGATTCTTCTCAGGAATGGAGAACCAGGTCTTCCTACC 45088 Query 4374 CATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATG 4433 ||||||||| | ||||||||||||| ||| ||||| || || |||||||| |||||||| Sbjct 45087 CATAATCACCACATTCTGTTTATCTTCTACTGAAGAGGTTGTGGTCATTCTCTGGAAATG 45028 Query 4434 TTTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTT 4493 | || || ||| | || ||||| |||| || ||| | ||||| ||||||||||| Sbjct 45027 CCTGAATTCGTTCCTGAGCAGCGGCCAGGGCAGGTCACCGTTCTTGCCGATGCCCATGTT 44968 Query 4494 TTGAGCTACAGCAACAATGCAGTTTAGTGCTTGAACCA 4531 || | ||| |||| ||||||||||| ||||||| Sbjct 44967 CTGGGACACAACAACGATGCAGTTTAGCAACTGAACCA 44930 >seq232 Length=582148 Score = 407 bits (450), Expect = 1e-108 Identities = 430/566 (76%), Gaps = 13/566 (2%) Strand=Plus/Minus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || |||||| |||||||||| ||||||||||||||||||| || | |||| Sbjct 414771 AAAACACCTTCATATTAACCATTCTTCTCACATACTTCAAATTTGTACTTCATGCCTTTC 414712 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || | ||| |||| ||| ||||||| || |||||| || ||||||||||||||| Sbjct 414711 TCCTGTTGGACATCAGAGAGAACACCCGGGTATTCTGGCAGAAGTTTGTATTTCTC---- 414656 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 ||||| | ||| || || ||||||||| ||||| ||||| || || | ||| Sbjct 414655 -CAAATAC----AAATAGA----ACTTTCAAAGTCCTGCATAATCCTTGTTCCATATAGT 414605 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 ||||||| || | | | | ||| ||||| ||| | |||||||| || |||| |||||| Sbjct 414604 TTAAGATGGCCTAGGTGATTCACGGCTTCCTTACAAACAGAACTGCCCCCAACTATCCAA 414545 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 | | |||||||| ||||||| ||||||| ||||| |||| |||||| |||||| | | | Sbjct 414544 ATGAAGTCTACTTCATTTGCTGATTCTGGTTGTTCAGTAAATTTTAAGGCATCAGCCAGA 414485 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 || | || | ||||||||||| |||||| | ||||| ||||| |||||||||| | | Sbjct 414484 CTTCTGGCAAGAAAATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACTAAA 414425 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374 |||||||| ||||||||| || |||||||||||||| ||||| || ||||| ||||| Sbjct 414424 TTAATTCTTTATTTTAAAGGTCGATTCTTCTCAGGAATGGAGAAGCAGGTCTTCCTACCC 414365 Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434 |||||||| | |||||||| | || ||| ||||| || || |||||||| || |||| Sbjct 414364 ATAATCACCAGATTCTGTTGACCTTCTACTGAAGAGGTTGTGGTCATTCTCTGAAAATAC 414305 Query 4435 TTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTT 4494 | || ||| || | || |||||| |||| | || ||||| ||||||||||| Sbjct 414304 CTGAATTCACTCCTCAGCAGTGGCCAGGGCAGGCCCCCGATCTTGCCGATGCCCATGTTC 414245 Query 4495 TGAGCTACAGCAACAATGCAGTTTAG 4520 || | ||||| | ||||||||||| Sbjct 414244 TGGGACACAGCGATGATGCAGTTTAG 414219 Score = 376 bits (416), Expect = 2e-99 Identities = 429/571 (75%), Gaps = 20/571 (4%) Strand=Plus/Minus Query 3954 TAAAAGACA--TTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTT 4011 ||||| ||| || ||||||| |||||||||| ||||||||||||||||||| || | | Sbjct 474849 TAAAATACACCTTCATATTAATCATTCTTCTCACATACTTCAAATTTGTACTTCATGCCT 474790 Query 4012 TTCTCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCT 4071 ||||| | || ||||| || ||||||| || |||||| || |||||||||||| || Sbjct 474789 TTCTCCTGCTGGACATTGGAGAGAACACCCGGGTATTCTGGCAGAAGTTTGTATTTTTC- 474731 Query 4072 AGATCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAAC 4131 ||||| | ||| ||| || ||||||||| ||| | | || ||| || | Sbjct 474730 ----CAAATAC----AAATAGG----ACTTTCAAAGTCCTGCGTAACTCTTGTCCCATAT 474683 Query 4132 AGTTTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATC 4191 |||||||||| | ||| | | |||| ||||| ||| | |||||||| || |||| |||| Sbjct 474682 AGTTTAAGATGGTCTGGGTGATTCATGGCTTCCTTACAAACAGAACTGCC-CCAACTATC 474624 Query 4192 CAGACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCT 4251 || | || ||||||| ||||||| ||||||| ||||| || | ||||| |||||| | Sbjct 474623 CAAATCACATCTACTTCATTTGCTGATTCTGGTTGTTCAGTGAACTTTAAGGCATCAGCC 474564 Query 4252 AAACTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACA 4311 | |||| || | |||||||||| |||||| | ||||| ||||| |||||||||| Sbjct 474563 AGACTCCAGGCAAGCAAATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGAGAACT 474504 Query 4312 ACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTA 4371 | ||||||||| ||||||||| | ||||||||||||| ||||| || ||||| || Sbjct 474503 AAATTAATTCTATATTTTAAAGGTTGATTCTTCTCAGGAACGGAGAAGCAGGTCTTCCTA 474444 Query 4372 CCCATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAA 4431 ||| |||||| | |||||||| | || ||| ||||| || || |||||||| |||||| Sbjct 474443 CCCCAAATCACCAGATTCTGTTGACCTTCTACTGAAGAGGTTGTGGTCATTCTCTGGAAA 474384 Query 4432 TGTTTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTG--TTTGCCAATGCCCA 4489 | | || |||||| | || ||||||||||| | ||| | |||| ||||||| Sbjct 474383 TACCTGAATTCATTCCTCAGCAGTGGCCAAGGCAGG--CCCTGGATCTTGCTGATGCCCA 474326 Query 4490 TGTTTTGAGCTACAGCAACAATGCAGTTTAG 4520 |||| || | ||||||| ||||||||||| Sbjct 474325 TGTTCTGGGACACAGCAATGATGCAGTTTAG 474295 >seq273 Length=130124 Score = 396 bits (438), Expect = 2e-105 Identities = 435/578 (75%), Gaps = 13/578 (2%) Strand=Plus/Minus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| || || ||||||| ||| |||||||||||||||||||| |||||||| |||| Sbjct 85038 AAAACACCTTCATATTAATCATTTTTCTCATATACTTCAAATTTATACTTAATGGCTTTC 84979 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || | || |||| || ||||||| || |||||| || ||||||||||||||||| Sbjct 84978 TCCTGCTGGACATCGGAGAGAACACCCGGGTATTCTGGCAGAAGTTTGTATTTCTCTA-- 84921 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 ||| | ||| ||| || ||||||||| ||||| ||||| || || | ||| Sbjct 84920 ---AATAC----AAATAGG----ACTTTCAAAGTCCTGCATAATCCTTGTTCCATATAGT 84872 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 ||||||| || ||| | | |||| || || ||| | ||||||||||| |||| |||||| Sbjct 84871 TTAAGATGGCCTGGGTGATTCATGGCCTCCTTACAAACAGAACTACCACCAACTATCCAA 84812 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 | ||| ||||||| |||| || ||||| ||||| ||||||||||| |||| | | | | Sbjct 84811 ATCATATCTACTTCATTTACTGATTCTCATTGTTCAGTAAGTTTTAAGGCATAAGCCAGA 84752 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAGAACAACA 4314 || | || | ||||||||||| |||||| | ||||| ||||| ||||| ||| | | Sbjct 84751 CTTCTGGCAAGAAAATGAGCTCCTTGTGGAGGTTCCTTGAGTTCTCTGCTGCAAACTAAA 84692 Query 4315 TTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTTTTTACCC 4374 |||||| || ||||||||| ||||||||||||||||| ||||| || ||||| ||||| Sbjct 84691 TTAATTTTGTATTTTAAAGGTCGGTTCTTCTCAGGAATGGAGAAGCAGGTCTTCCTACCC 84632 Query 4375 ATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTGGAAATGT 4434 |||||||| | |||||||| |||| ||| ||||| || || |||||||| ||||||| Sbjct 84631 ATAATCACCAGATTCTGTTGATCTTCTACTGAAGAGGTTGTGGTCATTCTCTGGAAATAC 84572 Query 4435 TTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCCCATGTTT 4494 | || |||||| | || || ||| |||| || | ||||| ||||||||| | Sbjct 84571 CTGAATTCATTCCTGAGCAGTGACCATGGCAGGTCCCGGATCTTGCCGATGCCCATGATC 84512 Query 4495 TGAGCTACAGCAACAATGCAGTTTAGTGCTTGAACCAT 4532 || | ||||| | | |||||| || |||||||| Sbjct 84511 TGGGACACAGCGATGAGGCAGTTCAGCAAATGAACCAT 84474 >seq111 Length=7367144 Score = 387 bits (428), Expect = 1e-102 Identities = 292/344 (85%), Gaps = 0/344 (0%) Strand=Plus/Plus Query 3955 AAAAGACATTTGTATTAATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTTTC 4014 |||| ||||| ||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct 6739439 AAAACACATTCATATTAATCATTCTTCTCATATACTTCAAATTTGTACTTAATGCCTTTC 6739498 Query 4015 TCTTCTTGCACATTAGAAAGAACACTTGGATATTCTATCAAAAGTTTGTATTTCTCTAGA 4074 || || || ||| ||| |||||| |||||||||| || ||| || |||||||| | | Sbjct 6739499 TCCTCCTGGGCATCAGAGGGAACACCTGGATATTCTGGCAGAAGCTTATATTTCTCCAAA 6739558 Query 4075 TCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAGT 4134 |||| |||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||| Sbjct 6739559 TCAATTTCTGGAAAAAACGTGTCACTTTCAAAGTCCTGCATGATCCTTGTCACAAACAGT 6739618 Query 4135 TTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATCCAG 4194 ||||||| || ||| | | ||||||||| ||||| |||||||| || ||||||||||| Sbjct 6739619 TTAAGATGGCCTGGGTGATCCATAGCTTCCTTATAAACAGAACTGCCACCAATTATCCAA 6739678 Query 4195 ACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATCATCTAAA 4254 | ||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| | | Sbjct 6739679 ATCATGTCTACTTTATTTGCTAATTCTGGTTGTTCAGTAAGTTTTAAGGCATCATCCAGA 6739738 Query 4255 CTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTC 4298 || | || | ||||||||||| |||||| ||||||| ||||| Sbjct 6739739 CTTCTGGCCAGAAAATGAGCTCCTTGTGGAGGCTCCTTAAGTTC 6739782 >seq18 Length=30262601 Score = 302 bits (334), Expect = 3e-77 Identities = 421/585 (72%), Gaps = 15/585 (3%) Strand=Plus/Minus Query 3955 AAAAGACATTTGTATTA--ATGATTCTTCTCATATACTTCAAATTTGTACTTAATACTTT 4012 |||| || ||| ||||| || |||||| | |||||||||||||||||||||||| |||| Sbjct 23448468 AAAACACCTTTATATTATAATCATTCTTTTAATATACTTCAAATTTGTACTTAATGCTTT 23448409 Query 4013 TCTCTTCTTGCACATTAGAAAGAACACTT---GGATATTCTATCAAAAGTTTGTATTTCT 4069 |||| || ||||| || | ||||| | || |||||| | | |||| ||||||| Sbjct 23448408 TCTCCTC---CACATCGGAGACAACACGTTGCGGGTATTCTGGGAGATGTTTATATTTCT 23448352 Query 4070 CTAGATCAAATTCTGGAAA--AAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCAC 4127 ||| |||| ||||| ||| ||| ||| |||||| || |||||||||| ||| | Sbjct 23448351 CTAACTCAACCTCTGGGGGGGAAAAGTGCCACTTTCAAAATCCTGCATGATCCACGTCTC 23448292 Query 4128 AAACAGTTTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAAT 4187 || ||||||| || | | ||| | | ||||| || ||||||||||| ||||| | Sbjct 23448291 GAATAGTTTAAAATGGTCTCT-TAATACTTGGCTTCCTTCTACACAGAACTGCCTCCCAC 23448233 Query 4188 TATCCAGACCATGTCTACTTTATTTGCTAATTCTGGCTGTTCGGTAAGTTTTAAAGCATC 4247 | | | ||||||| || |||||||| ||||||| | || | ||||||||||| ||||| Sbjct 23448232 TTTGAAAACCATGTTTAGTTTATTTGTTAATTCTAGTTGCCCAGTAAGTTTTAAGGCATC 23448173 Query 4248 ATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGAAGCTCCTTTAGTTCCTTGCTGAG 4307 ||| | ||| || | ||||| |||||| ||||| | ||||| |||||| | || || Sbjct 23448172 ATCCAGACTTCAGGCAAGAAAATTAGCTCTTTGTGGTGGTTCCTTGAGTTCCCTACTCAG 23448113 Query 4308 AACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGGAATTGAGAACCAAGTCTT 4367 ||| | |||||||||| ||||||| | || || |||| |||||| ||||| ||||| Sbjct 23448112 AACTAAATTAATTCTGTACTTTAAAGATTGATTATTTTCAGTAATTGAAAACCAGGTCTT 23448053 Query 4368 TTTACCCATAATCACTAAATTCTGTTTATCTGGTACAGAAGATGTAGTAGTCATTCTTTG 4427 ||| ||||| ||| |||||||||| || | | |||| || || |||||| |||| Sbjct 23448052 CCTACTCATAAATACTGGATTCTGTTTACCTTCTCCTAAAGAGGTTGTGGTCATTTTTTG 23447993 Query 4428 GAAATGTTTAAAATCATTCATAAGTCTTGGCCAAGGCAAGTTACCTTGTTTGCCAATGCC 4487 ||| || || | ||| | || | || || |||| | || | || | ||| | Sbjct 23447992 GAA----TTGAATTTATTTCTGAGCCGGGGTCAGGGCATGCCCCCATTCCTGACGATGAC 23447937 Query 4488 CATGTTTTGAGCTACAGCAACAATGCAGTTTAGTGCTTGAACCAT 4532 ||| || || | |||| ||| |||| |||| | |||| ||| Sbjct 23447936 CATCTTCTGGGAAACAGAGACAGGGCAGCTTAGCGGATGAATCAT 23447892 >seq31 Length=21858291 Score = 235 bits (260), Expect = 4e-57 Identities = 295/402 (73%), Gaps = 41/402 (10%) Strand=Plus/Minus Query 1052 TCTAGCTTTGCTCTCAATGAGCTATAAATAAAAATATAAAATCCACATTGATTACTATAC 1111 || ||| |||||||||||| || | ||||||||||| ||||| |||||||||||||||| Sbjct 12121703 TCCAGCCTTGCTCTCAATGGGCCGTGAATAAAAATATTAAATCAACATTGATTACTATAC 12121644 Query 1112 AAGACAATGAAGATGCTACTCACGTGTGTTATCTACAGTTTAATTATAGATAAAAGACAA 1171 ||||||||||||||||||||| |||||| |||||| |||||| | ||| ||||||||| Sbjct 12121643 GAGACAATGAAGATGCTACTCAAGTGTGTGGTCTACAATTTAATCAGAGAGAAAAGACAA 12121584 Query 1172 ATGATGCTTTACCAACTTAAGAACTACATGACA-TGTGTT---TT-----------CTAG 1216 |||||| || |||||| ||||| |||||||| |||||| || ||| Sbjct 12121583 ATGATGTCCTAACAACTTGAGAACCACATGACACTGTGTTACATTGAATGTTATGGCTAT 12121524 Query 1217 A---TTCTACATGAT---AG-------TAGAATCTTGAAGCTTTACAGGTCTTCTGTCTA 1263 | | | ||| ||| || |||||| ||| || || || | ||| || | Sbjct 12121523 ACAGTCCAACAGGATTCCAGAGAAGGACAGAATCCTGAGGCCCTAGAGCCCCTCTTTCCA 12121464 Query 1264 GAAGGCATATAGTAAAGATAAAGCTTATCTAGTGTCTTCAAAAGTAAGTAGTAGAGAAGA 1323 ||||||||||| | |||| |||||| || ||||| ||| || |||| |||||||| Sbjct 12121463 GAAGGCATATAATGAAGACGAAGCTTGGGCAGGGTCTTGAAAGGTGGGTAGGAGAGAAGA 12121404 Query 1324 CAACATGTAGCATATCACTGAGTAACTTAATTAAGAATACAGAGATa-aaaaaaTT---- 1378 | |||| ||| || |||||||||||| |||||||| ||||||||| || |||| Sbjct 12121403 CGACATCCGGCACATGACTGAGTAACTTGATTAAGAACACAGAGATACGAATAATTAGGG 12121344 Query 1379 --TGTTCATAGAGATTAAACAGTGAGTAAGTTAGTCAGTTTA 1418 |||||| ||| |||||||||| || || |||| || Sbjct 12121343 TGTGTTCA-GGAG-----ACAGTGAGTAGGTCAGCCAGTCTA 12121308 >seq8 Length=45331107 Score = 212 bits (234), Expect = 5e-50 Identities = 192/242 (79%), Gaps = 0/242 (0%) Strand=Plus/Minus Query 26931 AGCTTTTAGTCTACATTGTGAACAATGGGAGTAACGCATGTGCAGCCTACAGTCACTAGC 26990 |||| |||| | |||| | | |||||||| || ||||| |||||||| || | ||| ||| Sbjct 30303777 AGCTCTTAGGCCACATGGCGGACAATGGGGGTGACGCAGGTGCAGCCCACGGACACCAGC 30303718 Query 26991 ATCTTCTCTAGCCTAAATGAATTAGGGCAGGGTTGATGCCCTTTGCGCACCACTAGAATC 27050 |||||||| |||| || ||||| | |||| | || || | |||||| || || ||| Sbjct 30303717 ATCTTCTCCAGCCGGAAGGAATTGGTGCAGTGCCGAGGCTCCCTGCGCAGGACCAGGATC 30303658 Query 27051 TCTTGTTGGATAGGGACTGAGTTCATGTGGTAGTCTACATTCCCATCAGCATTAACACAT 27110 || || ||||| ||||| ||||||||||||||||| || |||||||||||||| || || Sbjct 30303657 TCCTGCTGGATGGGGACGGAGTTCATGTGGTAGTCCACGTTCCCATCAGCATTGACGCAG 30303598 Query 27111 CCTAAGTAGCGACACTTTGCTTCCCAAATCACAGAGGGATATCTATCTTGATCTTCATTG 27170 || |||| ||| ||||| || ||||| ||||||||||||||||| || | || |||||| Sbjct 30303597 CCCAAGTGGCGGCACTTCGCCTCCCAGATCACAGAGGGATATCTCTCAGGGTCCTCATTG 30303538 Query 27171 CG 27172 || Sbjct 30303537 CG 30303536 Score = 136 bits (150), Expect = 3e-27 Identities = 145/191 (76%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 27174 TGGAGAGTCCAAGGAGACGTAGATCTATTGTAGTAGTCTGAAGCCCTTTTAGAACTAGTA 27233 |||||| ||||||| || | |||| |||||||| ||||| | |||||| ||||| ||| Sbjct 30302394 TGGAGATTCCAAGGTGAGGAGGATCGGTTGTAGTAATCTGAGGTCCTTTTGGAACTGGTA 30302335 Query 27234 TTCCAGTTACGGATGCTCAAAGTAACCATCACAGACCGTGGAAAGCTATTGTTAGCAGC- 27292 |||| |||||||||| ||| | |||||||||| ||| || ||| | |||| |||| Sbjct 30302334 TTCCGGTTACGGATGTTCAGGTTGACCATCACAGTCCGGGGGAAGTTCTTGTCCTCAGCA 30302275 Query 27293 --TAAGCATCTTGGGGTTTGTGCGCTTGTTATTTCTGACTTTACTATACAATCTATGCTC 27350 | ||||| |||| |||| | |||||||||| ||| ||| ||| | || | |||| Sbjct 30302274 TTTGGGCATCCTGGGTTTTGCGGGCTTGTTATTCCTGCCTTCACTGTGGCCTCCAGGCTC 30302215 Query 27351 AGCAGCAGAAG 27361 |||||||| || Sbjct 30302214 AGCAGCAGCAG 30302204 >seq1 Length=72162052 Score = 163 bits (180), Expect = 2e-35 Identities = 119/138 (86%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 29381 GGGTCAGGAGTATATTACAGGTGTTGGAAGTTTGATGACTGTAGCTTTAAACGTATCTCA 29440 |||||||||||||||||| |||||||||||||||| || || || || ||||| |||||| Sbjct 36375362 GGGTCAGGAGTATATTACCGGTGTTGGAAGTTTGACGATTGCAGTTTCAAACGCATCTCA 36375303 Query 29441 AATCAATTGTCTGAAACACAGTTAAAGTATCATTGTTGTAAGAAGAACTTGTGTAATGTG 29500 || |||||||| ||||| |||||||||||||| || || ||||||||| |||||||||| Sbjct 36375302 AACCAATTGTCGGAAACTCAGTTAAAGTATCACTGCTGCAAGAAGAACCTGTGTAATGTT 36375243 Query 29501 AACAAAGGGATTGAAAAT 29518 || ||| | |||||||| Sbjct 36375242 AAGGAAGTGCTTGAAAAT 36375225 >seq2 Length=71252344 Score = 147 bits (162), Expect = 2e-30 Identities = 108/126 (86%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 4165 TTATACACAGAACTACCTCCAATTATCCAGACCATGTCTACTTTATTTGCTAATTCTGGC 4224 ||||| |||||||| || ||||||||||| | ||||||||||||||||||||||||||| Sbjct 59367326 TTATAAACAGAACTGCCACCAATTATCCAAATCATGTCTACTTTATTTGCTAATTCTGGT 59367267 Query 4225 TGTTCGGTAAGTTTTAAAGCATCATCTAAACTCTTAGCTAAAAAATGAGCTCTATGTGGA 4284 ||||| ||||||||||| |||||||| | ||| | || | ||||||||||| |||||| Sbjct 59367266 TGTTCAGTAAGTTTTAAGGCATCATCCAGACTTCTGGCCAGAAAATGAGCTCCTTGTGGA 59367207 Query 4285 AGCTCC 4290 ||||| Sbjct 59367206 GGCTCC 59367201 Score = 138 bits (152), Expect = 8e-28 Identities = 96/109 (88%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 4290 CTTTAGTTCCTTGCTGAGAACAACATTAATTCTGCCTTTTAAAGGCCGGTTCTTCTCAGG 4349 ||| ||||||||||||||||| ||||||||||| | ||||| || || ||||||||||| Sbjct 59356449 CTTGAGTTCCTTGCTGAGAACTACATTAATTCTATCCTTTAAGGGTCGATTCTTCTCAGG 59356390 Query 4350 AATTGAGAACCAAGTCTTTTTACCCATAATCACTAAATTCTGTTTATCT 4398 ||| |||||||| ||||| ||||||||||||| ||||||||||||||| Sbjct 59356389 AATGGAGAACCAGGTCTTCCTACCCATAATCACCAAATTCTGTTTATCT 59356341 Score = 111 bits (122), Expect = 1e-19 Identities = 96/118 (81%), Gaps = 1/118 (1%) Strand=Plus/Minus Query 4074 ATCAAATTCTGGAAAAAAGGTGTCACATTCAAAGTCTTGCATGATCCTAGTCACAAACAG 4133 ||||| |||||||||||| ||||||| ||||||||| ||||||||||| ||||||||||| Sbjct 59371467 ATCAATTTCTGGAAAAAACGTGTCACTTTCAAAGTCCTGCATGATCCTTGTCACAAACAG 59371408 Query 4134 TTTAAGATCGCATGGATAACTCATAGCTTCTTTATACACAGAACTACCTCCAATTATC 4191 |||||||| || ||| | | ||| ||||| || | | | ||| || | ||||| || Sbjct 59371407 TTTAAGATGGCCTGGGTGATCCATGGCTTCCTTTGAAATAAAACAACAT-CAATTTTC 59371351 >seq22 Length=27210278 Score = 100 bits (110), Expect = 2e-16 Identities = 223/329 (68%), Gaps = 8/329 (2%) Strand=Plus/Plus Query 101531 TCTTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATG 101590 || ||||||||||| | ||||||||| | ||||| | || || ||| | ||| | Sbjct 26912447 TCCTAAACAGCCATTTCCATTTTAATAGTTGGGTGCAGATTGTACCCTTCAACCTTAAAG 26912506 Query 101591 TCATCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAAC 101650 || || ||||| ||||||||||| ||| |||| | || | || |||| || Sbjct 26912507 TCTTCAGCTTTGAAGTCATCAATTTTCTCAACTTTTCGAAGAATCTTGAGCTTTGGGAAA 26912566 Query 101651 GGTCTAGGAGTTCGC-GTCAA-CTGCATTTTAAGAGCATCAATGTGATCTACATAGATGT 101708 ||||| | |||| | | || ||| ||||| || | || ||||||| | || || | Sbjct 26912567 GGTCT--GCGTTCTCACTGAAGCTGAATTTTCAGTGGCTCGATGTGATTCAGGTAAATAT 26912624 Query 101709 GAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCA--AT 101766 | |||||||| | || ||| | ||| || || ||| || ||| ||| ||| || Sbjct 26912625 GTGCATCTCCCAAAGCATGTACAAAATCACCTGGCTTCAGGCCCGTG--ATGTGCATGAT 26912682 Query 101767 CATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGC 101826 |||| | || | || | ||||| | ||||| || |||| |||| |||| || Sbjct 26912683 CATGTACGTGAGCAGGGCGTAGCTGGTGATGTTGAAAGGCATACCTAGGCCCACGTCTCT 26912742 Query 101827 TGATCTTTGATACAGTTGACAGGAAAGCT 101855 |||||| || ||||| |||||||| |||| Sbjct 26912743 TGATCTCTGGTACAGCTGACAGGACAGCT 26912771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361239374216186