Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20 2011-11-17] 2,686 sequences; 2,608,588,537 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq37 358 8e-94 seq5 235 7e-57 seq111 147 3e-30 seq9 114 2e-20 seq1056 100 3e-16 seq22 100 3e-16 seq3 89.7 6e-13 >seq37 Length=19344684 Score = 358 bits (396), Expect = 8e-94 Identities = 579/828 (70%), Gaps = 11/828 (1%) Strand=Plus/Plus Query 23764 GACAAATATCGGCATTTAT---GTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGT 23820 || ||||| |||| ||| ||| |||| |||||| || | || | |||| ||| | Sbjct 211230 GAAAAATAAAGGCACATATTCAGTTGATTTAGAAGTCAGCACCCAAGGTAAAAGAATTCT 211289 Query 23821 CTTCTTGA---GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAAT 23877 || | || ||||| |||||||| | || || | ||| || | || || || || | Sbjct 211290 CTGTTGGACTTGACATCACTCCCATCCTCTGATACTTACCTACTCTCTTCTCAAAGAAGT 211349 Query 23878 TAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGA 23937 |||| || ||||| | ||| ||||| ||||| || || ||||||| || | | | Sbjct 211350 TAGTGTTTCCTTCCAGTGAAATATTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAA 211409 Query 23938 TTCTTTTAAATCCCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCA 23997 || |||| |||| ||| || | ||| ||||| |||||||| || ||| |||| Sbjct 211410 CCCTGCTAAAACCCAGTTCCAGCATAAGTCTGTCTGCCACAAACTCAATGTATTGCTTCA 211469 Query 23998 TCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTT 24057 | | |||||||| || || || || || || | ||| ||||||| || || |||| Sbjct 211470 TTAGAGTGCAATTCATCCCAATGAGCTTCACAGGCAAGGCCTCAGTAAGGAACTCCTGTT 211529 Query 24058 CAATAGAGACCGCGTCTGTTA-TAATAGATCTTACTGTTTCTTCACTCGGTGGATACAAT 24116 | || || || ||| || | || ||||||| | || || ||| | | | Sbjct 211530 CCATCCGAACAGCA-CTGATAATTATTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACT 211588 Query 24117 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT 24176 ||||| ||||||| || |||||||| ||||||| |||||| ||||| | | | | | Sbjct 211589 TGGTGTTTGAACATCAGGCAAGCGAAATCACAGTGTAAACCCTCATCTCTGCCAGTAAGT 211648 Query 24177 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 24236 || || ||||| ||||| || ||||| || || || || || ||||| |||||||| ||| Sbjct 211649 TCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCA 211708 Query 24237 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA- 24295 || || ||||||||||| || ||||| ||||| |||||||| || ||| ||||| Sbjct 211709 AAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTGCAACGTGTTCACCATAG 211768 Query 24296 --ACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 24353 | | | |||| | ||| |||||||| |||||||| || ||||||||| Sbjct 211769 GTAGCCTCTTTGTCCCCAACCCAGAGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGC 211828 Query 24354 ATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCA 24413 || || || |||||||| |||||| | | |||| || |||||| | || || ||| Sbjct 211829 ATCGTTTCAATAGCATTGAAGAGAAATTCCCTTTCGTTGGGATCTTTTATGTAAGTGTCA 211888 Query 24414 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAA 24473 || | |||||||| ||||| ||||| ||||||| ||||||||||| || || |||||| Sbjct 211889 ATAAGGAGACTATATATTTCAGAATGTATGTTTTTCATGGCCATTTGGAAGCCATAGAAA 211948 Query 24474 CATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACT 24533 || || || || ||||| |||||| | |||||| || | || |||||||| ||| Sbjct 211949 CAGTGGGCTTCTGTGATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACT 212008 Query 24534 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATAT 24581 || || | ||| |||||||| || |||| || || |||||| ||| Sbjct 212009 ATGCCATAACTTGCTGCAAAGAAAGCCAGAACGTGGGATATAAAGTAT 212056 >seq5 Length=50794693 Score = 235 bits (260), Expect = 7e-57 Identities = 685/1041 (66%), Gaps = 24/1041 (2%) Strand=Plus/Minus Query 54031 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTC 54090 || |||||| |||||||| ||||||||||||| | ||| ||||||||| ||||| Sbjct 46265805 TCATTTCATGAAGAGATCTAGAATCCAAAGAGCAAAAAA--GATCTCTGGCATGCTGTTC 46265748 Query 54091 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 54150 | |||||| ||||||| || | ||| | || | | || || |||| || || || Sbjct 46265747 TTTCTTTCCTATATTCTTCTTTAAATCAAACAATTCAAAGATGTCTAAATGTCAAGGCTC 46265688 Query 54151 CAAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 54210 || ||| || | | ||||||| | ||||| || || |||| | |||| ||| || Sbjct 46265687 CAGGTAAATAGCAAATGCTCCAGGACCCTTGTTCCCACCTCGATCCAGATATCAAGCTGT 46265628 Query 54211 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGAT 54270 ||| ||||| ||||||| ||| | || |||||||| || || | ||| || Sbjct 46265627 GTTGTTATATACTCTCAGCATCAGTGCAAGGCCATTGGAATTGCCCTTAGACCCATCAAT 46265568 Query 54271 ATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGA 54330 ||||| ||| | || | |||| ||| | | | ||| || || || || |||||| Sbjct 46265567 GTAGCTGCCAGTAGCCCAAATACAACTCAAAGCAACACCAATTCCTCCAGCAGATTTAGA 46265508 Query 54331 GATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTT 54390 || || || ||| | |||| || ||||| ||||| || || || || || ||||| | Sbjct 46265507 AATCAACGCACATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCGTCTTTCATGCT 46265448 Query 54391 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 54450 || |||||||||||||| | ||| | | | || || ||| | || || || || || Sbjct 46265447 CAGAAGAAAACAGCTAGAAAGTTGTGGGTGGTTGGTACCAGCACTGAAGAAAGTTGGTGA 46265388 Query 54451 AGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGT---ACGTCTCGATAGCTGAGTCTAT 54507 ||| || |||||||| | |||| ||| ||| ||| || || || ||| || || Sbjct 46265387 AGCATGAGTAAACCACCTCTCAGGAAGAAGACTGTCTGCTGTTTCAATTGCTACATCAAT 46265328 Query 54508 ATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 54566 ||| | ||| || || || || | || | ||| ||||| | ||| ||| ||||| | | Sbjct 46265327 ATCTTCTTTGTTG-ATCCCAACAGATACTCTCATCAACATATACTGTGGTATTTCAGCCA 46265269 Query 54567 TCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 54626 || || || |||| ||| || || | | | ||||||||||| || |||| Sbjct 46265268 CTTTTCCATTGATCTTCAACAAATAAGACAACTGTAGCATCTTAAAACCAAAGTAATTGT 46265209 Query 54627 ATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTGTTAACTA 54686 | || || ||| | | |||||| | || || | | ||| |||| ||| | Sbjct 46265208 AAGAGAAATCTTAGCCACAGATAATAGCAGAATTCAAGTGATCTTTATTGGCCAAAACAA 46265149 Query 54687 CATCCA-TGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATA 54744 ||||| || | |||| | | || ||||| |||| ||| | ||| | || | Sbjct 46265148 TATCCAGTGCT--GACTTGGCCACCATGGGAGAGCGTTTGTCATGATGTGGACTTACGCA 46265091 Query 54745 GTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGA 54804 |||| | | || | |||||| ||||| || | || |||||||||||||| | || || Sbjct 46265090 GTTATAGAGGTCTTCCATCACATCACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGA 46265031 Query 54805 TACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGC 54864 || || | ||||| || || || ||||| | || || | ||||| ||| |||||| Sbjct 46265030 GACAGCAGTCCTAGCTGCCAGGATAGCATAGACAGGGTGCTTAGTAGT-CAA--GGCTGC 46264974 Query 54865 TATTTCGGCTGTCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGAT 54924 || | | | | || | ||| | | | || || ||| | || | | |||||| Sbjct 46264973 -----CGCC---AAAAATATCTAGTTCCATCATAGTGACCCCACTGTACAAGCATTGGAT 46264922 Query 54925 AACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTT 54984 || ||||| | || | | ||||| | | ||| | | ||||||||| || | Sbjct 46264921 TACTTTCATGGTGATCTGAGCGGGATCAACAAAATCCACAATGAGGCCATAACA-AAGCT 46264863 Query 54985 TCT-AATACGAGATGTGATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTTAA 55043 ||| || |||||| | ||||| ||||| ||||| | | || |||| | | || | Sbjct 46264862 TCTGGATTCGAGATTTAATTTTGTCAAATATGACTCGCTTTTGGTGGCCATCTTGCTTGA 46264803 Query 55044 TGACAAACATTTTTGTTGGTG 55064 | ||| |||| || | ||||| Sbjct 46264802 TCACACACATCTTAGCTGGTG 46264782 >seq111 Length=7367144 Score = 147 bits (162), Expect = 3e-30 Identities = 296/437 (68%), Gaps = 8/437 (2%) Strand=Plus/Plus Query 24152 TAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACG 24211 || |||||| || || ||||| | ||| |||||||| ||||| || | ||| || | | Sbjct 4918143 TAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGACATCAGTCATTG 4918202 Query 24212 CTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGC 24271 || || ||||| ||||| || ||||| || |||||| |||| | |||||||||| || Sbjct 4918203 TTTCTTGAGCCAGAATATTGATGCAAAAGAACCAGAAGAGAAGGTGCCTTCTACTGTGGC 4918262 Query 24272 AAAGGCAATAAGTCTTTCTCCATA---ACCGGCGCTGTCATGTATCCACTTTTGAGCCCA 24328 |||||| || | ||||| | | | | ||| ||||| ||||| Sbjct 4918263 AAAGGCTGCAACACGTTCTCTGTGGGTAGCATCTTTGTTCACAATCCAACACAAGGCCCA 4918322 Query 24329 ATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttC 24388 ||| |||| ||| || ||||||||||| | || || || || |||||| | | |||| Sbjct 4918323 ATCTGCCTCCTTCTTGACACAAGGCATCCTTTCGATGGCGTTGAAGAGAAATTCCCTTTC 4918382 Query 24389 ATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTC 24448 || | |||||||| |||| ||| | || ||| ||| ||| || |||| |||||||| Sbjct 4918383 TTTGTTGTCTTTAAC--ATGTGTCAGTAAAGAGATTATCCATGTCAGAATATATGTTTTC 4918440 Query 24449 AATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAA 24508 || || ||||| || || ||||| || | || ||| || |||||| | | Sbjct 4918441 CATAGCAATTTGGAAGCCATAGAAGCA---GGTTTCTGTAGCTTGAACTTCTTGGACACA 4918497 Query 24509 TCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATG 24568 | | || | || |||| || ||||| || | |||||||| || | || | ||| Sbjct 4918498 TTGCTCCACCAAGTTTTTATCAACTATGCCACGGCATGCTGCAAAGAAAGTCAGAATATG 4918557 Query 24569 TTTTATAAAATATTTTT 24585 |||||||||| ||| Sbjct 4918558 GGATATAAAATATCTTT 4918574 >seq9 Length=44311105 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 52875 TCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 52934 |||| ||||| || ||||||||||| |||||| ||| | || || || || ||||| | Sbjct 1875011 TCCAGCCGTAGAAGTGCATACTTGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 1875070 Query 52935 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 52994 ||| ||| || |||||||| ||||| || || || || |||||||| || | | || | Sbjct 1875071 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 1875130 Query 52995 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 53045 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 1875131 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 1875181 Score = 113 bits (124), Expect = 5e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 53150 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 53209 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | | Sbjct 1878112 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATA 1878171 Query 53210 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 53269 ||||||||||| |||| || |||||||| || || || ||||| || || | | |||| Sbjct 1878172 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 1878231 Query 53270 CTATTTCTAAGACCGTA 53286 || ||||| | ||| || Sbjct 1878232 CTGTTTCTTATACCATA 1878248 Score = 113 bits (124), Expect = 5e-20 Identities = 106/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 54025 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCT 54084 || |||||||||||| |||||||| |||||||||||||| | ||| |||||||||| | Sbjct 1896017 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACG 1896076 Query 54085 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 54144 ||||| || |||||||| ||||| || | ||| ||||| | | || || ||||||| Sbjct 1896077 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCA 1896136 Query 54145 CGGTTCCAAGTATAT 54159 || |||| ||| || Sbjct 1896137 AGGCTCCAGGTAAAT 1896151 Score = 102 bits (112), Expect = 1e-16 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 54768 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAA 54827 |||| || | ||| |||||||||||||| | || || ||||| || || || || || | Sbjct 1910898 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCAATCCTGGCTGCCAGGA 1910957 Query 54828 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCA 54887 | ||||| || ||||| | ||||| | || || ||| |||| || | || ||| || | Sbjct 1910958 TAGCATAGTCAGGATGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 1911017 Query 54888 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933 ||| ||||| || || ||| | || | |||||||| |||||||| Sbjct 1911018 GTTCCACCGTGGTGACCCCACTGTACAAGCCTTGGATTACCTTCAT 1911063 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 53388 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 53447 |||| || || |||||||| | || || || || ||||| || || || | || |||| Sbjct 1883222 CATAGGTTTCATATGGTCCATGCTCCTTGGCAAGGTCACAGCTGGCTTCCAGGGCTCCGT 1883281 Query 53448 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 53507 ||||||| ||||| ||||||| |||||| | || ||||| || ||||| || | Sbjct 1883282 AATAAATAGTTTCAAAGATCTGCTTATTCAATAACTGGGCTTCTGCACTCTCAAAAGGGT 1883341 Query 53508 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 53567 | | | || ||||| || ||||| | ||||| || ||||| || || || | ||| | Sbjct 1883342 ATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGAC 1883401 Query 53568 TCTTATTAGA 53577 ||||| || Sbjct 1883402 GTTTATTTGA 1883411 >seq1056 Length=1934 Score = 100 bits (110), Expect = 3e-16 Identities = 219/322 (68%), Gaps = 17/322 (5%) Strand=Plus/Plus Query 21922 ATCTAGAGATTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGC 21981 ||| | || ||| ||||||| | |||||| ||| | || |||| | | || ||||| || Sbjct 724 ATCCAAAGCTTGAACTTCTTCTATTTCTGGGTAAAAAATCCGTTCACAAATGAGCTGTGC 783 Query 21982 TATTCTATCCCCCGTATTTACATTAAATGTATATTTTCCATTATTAATAAGAATGACTCC 22041 |||| ||||| | || || | ||| | | ||| ||| |||| || | || || Sbjct 784 AATTCGATCCCTTTTTTTGACTTCAAACTTTTCTTTGCCAAAATTATACAGCACAACACC 843 Query 22042 TATATTTCCCCTATAATCTTCGTCTATTACACCGCCTCCTATATCAAT---GCCTTTTAG 22098 | |||||| ||||||||||| ||||| ||||| |||||| |||||| | |||| Sbjct 844 AACATTTCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTGC 903 Query 22099 GGACAGACCAGACCTAGGAGCTATTCTACCATAGCAGAACTTAGGCATGGACATACTA-- 22156 | || ||||||| ||||||| ||| |||| | || || | ||| |||| Sbjct 904 AGCCAAGCCAGACCGTGGAGCTACTCTTTCATAAC---ACCCAG--AAGGAAGCACTATC 958 Query 22157 ---ATATCTGTCTTAATTAATTGTCTTTCTCC--TGGAGGGATAGTATAATCATAAGCGC 22211 || ||||| || | || || ||||||| || ||||| || |||||||| || | Sbjct 959 TGTATGTCTGTTTTCA-CAAGAGT-TTTCTCCATAGGTGGGATTGTGTAATCATAGGCAC 1016 Query 22212 TATATAAATCATATCCGGCGGC 22233 | || | || || || ||||| Sbjct 1017 TGTACAGGTCGTAGCCCGCGGC 1038 >seq22 Length=27210278 Score = 100 bits (110), Expect = 3e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 24395 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 24454 |||||| | || || ||||| | |||||||||||||| ||||| |||||||| ||||| Sbjct 23199818 ATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 23199877 Query 24455 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTATACAAAATCGTTC 24514 ||||| || || |||||||| | || || |||||||| |||||| | |||||| || Sbjct 23199878 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 23199937 >seq3 Length=58292249 Score = 89.7 bits (98), Expect = 6e-13 Identities = 146/210 (70%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 21928 AGATTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCT 21987 || ||| ||||||| | |||||| ||| | || |||| | | || || || || |||| Sbjct 29419078 AGCTTGAACTTCTTCTATTTCTGGGTAAAAAATCCGTTCACAAATGAGTTGTGCAATTCG 29419137 Query 21988 ATCCCCCGTATTTACATTAAATGTATATTTTCCATTATTAATAAGAATGACTCCTATATT 22047 ||| | | || || | ||| | | ||| ||| ||||| || || || | || Sbjct 29419138 ATCATCTTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTGCAACACCAACGTT 29419197 Query 22048 TCCCCTATAATCTTCGTCTATTACACCGCCTCCTATATCAAT---GCCTTTTAGGGACAG 22104 ||| ||||||||||| ||||| ||||| |||||| |||||| | |||| | || Sbjct 29419198 TCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTTCAGCCAA 29419257 Query 22105 ACCAGACCTAGGAGCTATTCTACCATAGCA 22134 ||||||| |||||||| ||| || || || Sbjct 29419258 GCCAGACCGAGGAGCTACTCTTCCGTAACA 29419287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593701665797280