Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq22 111 1e-19
seq12 89.7 4e-13
>seq22
Length=27210278
Score = 111 bits (122), Expect = 1e-19
Identities = 251/375 (67%), Gaps = 2/375 (1%)
Strand=Plus/Plus
Query 96898 TAAACAGCCATGGGCATTTTTATGCTAGGGTAAGGGTTATAGTTTTCCAGAATAATGTCA 96957
||||||||||| |||||| || | |||| | || || ||| | ||| |||
Sbjct 26912450 TAAACAGCCATTTCCATTTTAATAGTTGGGTGCAGATTGTACCCTTCAACCTTAAAGTCT 26912509
Query 96958 TTTGCTTTAAAATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGC 97017
| ||||| || |||||||| ||| |||| || ||| || ||||||||||
Sbjct 26912510 TCAGCTTTGAAGTCATCAATTTTCTCAACTTTTCGAAGAATCTTGAGCTTTGGGAAAGGT 26912569
Query 97018 CTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCA 97077
||| | || | |||||| | | || | || |||||||||| ||||| || |||
Sbjct 26912570 CTGCGTTCTCACTGAAGCTGAATTTTCAGTGGCTCGATGTGATTCAGGTAAATATGTGCA 26912629
Query 97078 TCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAA 97137
||||| |||| || | ||| || || || | | |||| || |||||| |
Sbjct 26912630 TCTCCCAAAGCATGTACAAAATCACCTGGCTTCAGGCCCGTGATGTGCATGATCATGTAC 26912689
Query 97138 GTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTT 97197
|| | || | ||||| | ||||| ||||||| ||||| |||| || ||||||
Sbjct 26912690 GTGAGCAGGGCGTAGCTGGTGATGTTGAAAGGCATACCTAGGCCCACGTCTCTTGATCTC 26912749
Query 97198 TGATATAACTGACAGGAAAGCTTTC-CATCACACACATAAAACTGACTCAATACATGACA 97256
|| || | ||||||||| |||| | |||| ||| || ||||| | | |||| ||
Sbjct 26912750 TGGTACAGCTGACAGGACAGCTCACTGTTCAC-CACGTAGAACTGGCAGAGGGCATGGCA 26912808
Query 97257 GGGGGGCAACGCCAT 97271
||||||||||||||
Sbjct 26912809 TGGGGGCAACGCCAT 26912823
>seq12
Length=39782659
Score = 89.7 bits (98), Expect = 4e-13
Identities = 97/126 (77%), Gaps = 2/126 (2%)
Strand=Plus/Minus
Query 97402 TATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCT 97461
|||||||| |||||||| ||||| ||||| |||||||| || || | ||| |||||||||
Sbjct 25685087 TATTCTGCCCCAAAATGTCTCCACTGGAAGCCATAAACTGGGCCCAAGTCCCCTTCTTCT 25685028
Query 97462 CTATCACAGAA-ACCAAGCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAATGTG 97520
|| | |||| |||||| |||| | | || | |||||||| |||||||| || |
Sbjct 25685027 CTGGCGGAGAATCCCAAGC-TATCCAGAAAGTCTCGGGATCCATTGGCATCCCAGATTTT 25684969
Query 97521 CACACC 97526
||| ||
Sbjct 25684968 CACTCC 25684963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346772647809020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |