Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq8 109 1e-18
>seq8
Length=45331107
Score = 109 bits (120), Expect = 1e-18
Identities = 106/133 (80%), Gaps = 4/133 (3%)
Strand=Plus/Plus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|||||||||||||| ||| | ||||| ||||||||||| ||||||||| | || ||||||
Sbjct 41301560 GCATTTTTTGGAGCACAGATGAATTCCTTTATCCATGTGATTATGTACTCATACTATGGT 41301619
Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174
| | || | ||| || ||| |||||||| ||||| ||||||||||| || || || |
Sbjct 41301620 TTAACTGCATTTGG-CCCATGGATTCAGAAA-TATCTTTGGTGGAAACGATACCTGACCA 41301677
Query 52175 TAATGCAGTTGGT 52187
| ||||| ||||
Sbjct 41301678 TGTTGCAGCTGGT 41301690
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923165803667440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |