Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq22 127 2e-24
>seq22
Length=27210278
Score = 127 bits (140), Expect = 2e-24
Identities = 262/388 (68%), Gaps = 4/388 (1%)
Strand=Plus/Minus
Query 20389 GATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAAT 20448
||| | ||| | ||||| ||||| ||||| ||| || ||||| || ||||| | ||
Sbjct 26912835 GATCTTCCTCTGATGGCGTTGCCCCCATGCCATGCCCTCTGCCAGTTCTACGTGGTGAAC 26912776
Query 20449 AATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTC 20508
| ||| |||| ||||| |||| || |||| || |||| || ||| | ||||||
Sbjct 26912775 AGTGAGCTGTCCTGTCAGCTGTACCAGAGATCAAGAGACGTGGGCCTAGGTATGCCTTTC 26912716
Query 20509 AATATTGCAAGTTATGCGCTGCTTACGTATATGAT--TGCACATGTTACAGATTTAAAAA 20566
|| || | || || || ||||| ||||| ||||| ||||||| || | | ||
Sbjct 26912715 AACATCACCAGCTACGCCCTGCTCACGTACATGATCATGCACATC--ACGGGCCTGAAGC 26912658
Query 20567 CGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAATCATATAGAACCTT 20626
| ||||| || || || | | ||||| || ||||||||||| ||||| || || ||
Sbjct 26912657 CAGGTGATTTTGTACATGCTTTGGGAGATGCACATATTTACCTGAATCACATCGAGCCAC 26912598
Query 20627 TAAAATTACAGTTAACACGACAACCAAAACAATTCCCAACTCTTCGCATTACTCGAACTG 20686
| ||| | ||| | || ||| | || ||||||| || ||| ||||| |
Sbjct 26912597 TGAAAATTCAGCTTCAGTGAGAACGCAGACCTTTCCCAAAGCTCAAGATTCTTCGAAAAG 26912538
Query 20687 TTAAAGATATTAACGATTTTAAAGCTGATGATTTTGTGTTAGAAGGTTATAATCCCCATA 20746
|| | | ||| | || || |||||||| || ||| | | ||||| || |||| ||
Sbjct 26912537 TTGAGAAAATTGATGACTTCAAAGCTGAAGACTTTAAGGTTGAAGGGTACAATCTGCACC 26912478
Query 20747 ATTCAATTCCAATGGAAATGTCTGTTTA 20774
| ||| |||||||||| |||||||
Sbjct 26912477 CAACTATTAAAATGGAAATGGCTGTTTA 26912450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399170932462270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |