Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq37 111 3e-19
>seq37
Length=19344684
Score = 111 bits (122), Expect = 3e-19
Identities = 288/437 (66%), Gaps = 9/437 (2%)
Strand=Plus/Minus
Query 101921 GCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGATC 101980
|||||||||||||| ||||| ||||||||| |||| | || |||||||| |||||| ||
Sbjct 211749 GCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCTGGTTCTTTTGCATCCATATTCTGGCTC 211690
Query 101981 AAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACGAA 102040
||||| | || | ||||||| ||||| | || ||||| | | | || || ||
Sbjct 211689 AAGAAACGAGGACTGATGCCTGGCCTCACATTTTCTAATGAACTTACTGGCAGAGATGAG 211630
Query 102041 GGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCATCA 102100
||| | || | || || || ||| || |||| ||| | || | | ||||||
Sbjct 211629 GGTTTACACTGTGATTTCGCTTGCCTGATGTTCAAACA---CCAAGTACACAAACCATCA 211573
Query 102101 AGAGAAAGGATTCTTGA---AATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTC 102157
|| || | || |||| ||| | || || || || ||||| || || ||
Sbjct 211572 GAGGAGAGAGTAAGAGAAATAATTATCAGT---GCTGTTCGGATGGAACAGGAGTTCCTT 211516
Query 102158 ACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATT 102217
|| | || ||||||| || | | || ||||| |||| | |||| || ||||||
Sbjct 211515 ACTGAGGCCTTGCCTGTGAAGCTCATTGGGATGAATTGCACTCTAATGAAGCAATACATT 211456
Query 102218 GAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTTACC 102277
|| ||||||||||| | ||| || | ||| |||| | | | | | ||
Sbjct 211455 GAGTTTGTGGCAGACAGACTTATGCTGGAACTGGGTTTTAGCAGGGTTTTCAGAGTAGAG 211396
Query 102278 AACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAAAAG 102337
|| || || || ||||| |||||||| || || || || ||||| ||||| |||
Sbjct 211395 AATCCATTTGACTTTATGGAGAATATTTCACTGGAAGGAAACACTAACTTCTTTGAGAAG 211336
Query 102338 AGAGTCGCCGAGTATCA 102354
||||| | |||||||
Sbjct 211335 AGAGTAGGTAAGTATCA 211319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989549944085130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |