Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20 2011-11-17] 2,686 sequences; 2,608,588,537 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq37 389 5e-103 seq5 241 2e-58 seq34 206 3e-48 seq111 149 8e-31 seq9 111 2e-19 seq3 98.7 1e-15 seq1056 95.1 2e-14 seq22 95.1 2e-14 seq19 93.3 5e-14 >seq37 Length=19344684 Score = 389 bits (430), Expect = 5e-103 Identities = 670/966 (69%), Gaps = 19/966 (2%) Strand=Plus/Plus Query 33211 GACAAATATCGGCATTTAT---GTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGT 33267 || ||||| |||| ||| ||| |||| |||||| || | || | |||| ||| | Sbjct 211230 GAAAAATAAAGGCACATATTCAGTTGATTTAGAAGTCAGCACCCAAGGTAAAAGAATTCT 211289 Query 33268 CTTCTTGA---GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAAT 33324 || | || ||||| |||||||| | || || | ||| || | || || || || | Sbjct 211290 CTGTTGGACTTGACATCACTCCCATCCTCTGATACTTACCTACTCTCTTCTCAAAGAAGT 211349 Query 33325 TAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAA 33384 |||| |||||||||| ||| ||||| ||||| || ||||| ||||| || || ||| Sbjct 211350 TAGTGTTTCCTTCCAGTGAAATATTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAA 211409 Query 33385 tttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCA 33444 | |||| |||| ||| || | ||| ||||| || || || || ||| |||| Sbjct 211410 CCCTGCTAAAACCCAGTTCCAGCATAAGTCTGTCTGCCACAAACTCAATGTATTGCTTCA 211469 Query 33445 TCATTTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTT 33504 | | |||||||| || ||||| || || || | ||| ||||||| || || |||| Sbjct 211470 TTAGAGTGCAATTCATCCCAATGAGCTTCACAGGCAAGGCCTCAGTAAGGAACTCCTGTT 211529 Query 33505 CAATGGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATA 33564 | || || ||| | | || || ||| || | || || ||| |||| | Sbjct 211530 CCATCCGAACAGCACTGATAATTATTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTT 211589 Query 33565 AATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATT 33624 ||||| ||||||| || |||||||| ||||| | |||||| ||||| | | | | || Sbjct 211590 GGTGTTTGAACATCAGGCAAGCGAAATCACAGTGTAAACCCTCATCTCTGCCAGTAAGTT 211649 Query 33625 CGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGA 33684 | |||||||| ||||| || ||||| || || || || || ||||| |||||||| || | Sbjct 211650 CATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAA 211709 Query 33685 ATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAA-GTCTCTCTCCATA- 33742 | || || ||||||||||| ||||| |||||||||||||| || || | || ||||| Sbjct 211710 AAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTGCAACGTGT-TCACCATAG 211768 Query 33743 --ACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 33800 | | | |||| | ||| |||||||| |||||||| || ||||||||| Sbjct 211769 GTAGCCTCTTTGTCCCCAACCCAGAGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGC 211828 Query 33801 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCG 33860 |||||||| || ||||| |||||| | | |||| || |||||| | ||||| || Sbjct 211829 ATCGTTTCAATAGCATTGAAGAGAAATTCCCTTTCGTTGGGATCTTTTATGTAAGTGTCA 211888 Query 33861 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 33920 || | |||||||| ||||| ||||| ||||||| |||||||| || || || |||||| Sbjct 211889 ATAAGGAGACTATATATTTCAGAATGTATGTTTTTCATGGCCATTTGGAAGCCATAGAAA 211948 Query 33921 CATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACT 33980 || || || || ||||| |||||| | |||||| || | || |||||||| ||| Sbjct 211949 CAGTGGGCTTCTGTGATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACT 212008 Query 33981 ATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGT 34040 || |||| ||| |||||||| || |||| || || |||||| ||| | | || || Sbjct 212009 ATGCCATAACTTGCTGCAAAGAAAGCCAGAACGTGGGATATAAAGTATCTCCCCTCGGGC 212068 Query 34041 GTTAGTTTATTCCAATCATTG----ATATCTTTAGATATATCCACTTCTTCCACTGTCCA 34096 | || ||||| || || | || || || | ||||| || | ||||| Sbjct 212069 TTCAG-GGATTCC---CAGTGCCAAACGTCCTTGGACAGGTCCACCTCCTTGGTGGTCCA 212124 Query 34097 AAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAAT 34156 || || ||||| |||| ||||| | | |||||| || | || | ||| ||||| || Sbjct 212125 GAAGGAGGCCTCCCCCTTCTTATATGTCTGCCAGATATCGGGGTACTCGATGGGGAATAT 212184 Query 34157 AACAAA 34162 ||||| Sbjct 212185 GACAAA 212190 >seq5 Length=50794693 Score = 241 bits (266), Expect = 2e-58 Identities = 685/1041 (66%), Gaps = 24/1041 (2%) Strand=Plus/Minus Query 63269 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTC 63328 || |||||| |||||||| ||||||||||||| | ||| ||||||| | ||||| Sbjct 46265805 TCATTTCATGAAGAGATCTAGAATCCAAAGAGCAAAAAA--GATCTCTGGCATGCTGTTC 46265748 Query 63329 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 63388 | |||||| ||||||| || | ||| | || | | || || |||| || || || Sbjct 46265747 TTTCTTTCCTATATTCTTCTTTAAATCAAACAATTCAAAGATGTCTAAATGTCAAGGCTC 46265688 Query 63389 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 63448 || ||| || || | ||||||| | ||||| || || |||| | |||| ||| || Sbjct 46265687 CAGGTAAATAGCAAATGCTCCAGGACCCTTGTTCCCACCTCGATCCAGATATCAAGCTGT 46265628 Query 63449 GTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGAT 63508 ||| ||||| ||||||| ||| | || || || || | || || | || || Sbjct 46265627 GTTGTTATATACTCTCAGCATCAGTGCAAGGCCATTGGAATTGCCCTTAGACCCATCAAT 46265568 Query 63509 ATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 63568 |||| ||| | || | |||| ||| | | | ||| ||||| || || |||||| Sbjct 46265567 GTAGCTGCCAGTAGCCCAAATACAACTCAAAGCAACACCAATTCCTCCAGCAGATTTAGA 46265508 Query 63569 GATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTT 63628 || || || ||| | |||| |||||||| |||||||| ||||| || || ||||| | Sbjct 46265507 AATCAACGCACATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCGTCTTTCATGCT 46265448 Query 63629 AAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGA 63688 || |||||||||||||| | ||| | | | || || ||| | || || || || || Sbjct 46265447 CAGAAGAAAACAGCTAGAAAGTTGTGGGTGGTTGGTACCAGCACTGAAGAAAGTTGGTGA 46265388 Query 63689 AGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGT---ACGTCTCAATAGCTGAGTCTAT 63745 ||| || |||||||| | |||| ||| ||| ||| || ||||| ||| || || Sbjct 46265387 AGCATGAGTAAACCACCTCTCAGGAAGAAGACTGTCTGCTGTTTCAATTGCTACATCAAT 46265328 Query 63746 ATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAA 63804 ||| | ||| || || || || | || | ||| ||||| | ||| ||| ||||| | | Sbjct 46265327 ATCTTCTTTGTTG-ATCCCAACAGATACTCTCATCAACATATACTGTGGTATTTCAGCCA 46265269 Query 63805 TTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 63864 ||| || || |||||||| || || | | | ||||||||||| || |||| Sbjct 46265268 CTTTTCCATTGATCTTCAACAAATAAGACAACTGTAGCATCTTAAAACCAAAGTAATTGT 46265209 Query 63865 ATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTA 63924 | || || ||| | | |||||| | ||||| | | ||| |||| ||| | Sbjct 46265208 AAGAGAAATCTTAGCCACAGATAATAGCAGAATTCAAGTGATCTTTATTGGCCAAAACAA 46265149 Query 63925 TATCCA-TGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATA 63982 |||||| || | |||| | | || ||||| |||| ||| | ||| | || | Sbjct 46265148 TATCCAGTGCT--GACTTGGCCACCATGGGAGAGCGTTTGTCATGATGTGGACTTACGCA 46265091 Query 63983 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGA 64042 ||| | | || |||||||| ||||| || | || |||||||| ||||| | || || Sbjct 46265090 GTTATAGAGGTCTTCCATCACATCACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGA 46265031 Query 64043 TATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGC 64102 | || | || || || || || ||||| | || || | ||||| ||| |||||| Sbjct 46265030 GACAGCAGTCCTAGCTGCCAGGATAGCATAGACAGGGTGCTTAGTAGT-CAA--GGCTGC 46264974 Query 64103 TATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAAT 64162 | | | | | || | ||| | | | || || ||| | || | | ||| || Sbjct 46264973 --------CGCCAAAAATATCTAGTTCCATCATAGTGACCCCACTGTACAAGCATTGGAT 46264922 Query 64163 AACCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTT 64222 || ||||| | || | | ||||| | | |||| | | |||||| || || | Sbjct 46264921 TACTTTCATGGTGATCTGAGCGGGATCAACAAAATCCACAATGAGGCCATAACA-AAGCT 46264863 Query 64223 TCT-AATACGAGACGTGATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTTAA 64281 ||| || ||||| | ||||| ||||| ||||| | | || |||| | | || | Sbjct 46264862 TCTGGATTCGAGATTTAATTTTGTCAAATATGACTCGCTTTTGGTGGCCATCTTGCTTGA 46264803 Query 64282 TGACAAACATTTTTGTTGGTG 64302 | ||| |||| || | ||||| Sbjct 46264802 TCACACACATCTTAGCTGGTG 46264782 >seq34 Length=20716200 Score = 206 bits (228), Expect = 3e-48 Identities = 210/274 (77%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 188378 GGATCTATAGGCTTGATTTTCGCATTGACTTTACACAGACATAAACATCCCCTGAATCTG 188437 |||||| | || |||||||| |||||||||||| |||| ||| ||||||| || ||| Sbjct 20502836 GGATCTCTGGGTTTGATTTTTGCATTGACTTTAAACAGCTGTAAGTATCCCCTTAACCTG 20502895 Query 188438 TACCTACTTTGTGGATTTACACTGTTAGAATCTCTAACGCTGGCCTCTGTTGTTACTTTC 188497 | ||| |||| ||||||||||||||| | | |||| || |||| ||||||||||||| Sbjct 20502896 TGCCTGCTTTTTGGATTTACACTGTTGGGAGCTCTGACTGTGGCAGTTGTTGTTACTTTC 20502955 Query 188498 TATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTTCTTGCTCTG 188557 |||||| |||| || | ||||||||||| ||||||||||||| || || | || Sbjct 20502956 TATGATATATGTATTATTCTGCAAGCTTTCATACTGACTACTGCAGTAATTTTTAGTTTG 20503015 Query 188558 ACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGGATTGTTTGCT 188617 ||| |||||| ||||| ||||| |||||||| ||| ||| | |||| |||||||| Sbjct 20503016 ACTGTGAATACTCTGCAATCTAAGAGGGATTTCAGCAAATTTGGAGCAGGGCTGTTTGCT 20503075 Query 188618 GCTTTCTGGATTTTAATTTTGTCAGGAGTCTTGA 188651 ||| | |||||| |||||||| |||||| Sbjct 20503076 CTTTTGTAGATTTTGTGCCTGTCAGGATTCTTGA 20503109 >seq111 Length=7367144 Score = 149 bits (164), Expect = 8e-31 Identities = 299/436 (69%), Gaps = 12/436 (3%) Strand=Plus/Plus Query 33602 ACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTT 33661 |||||| || || ||||| | ||| || ||||| ||||| || | ||| || | | || Sbjct 4918146 ACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGACATCAGTCATTGTTT 4918205 Query 33662 TTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAA 33721 || ||||| ||||| || || || || || ||| ||||| | |||||||||| ||||| Sbjct 4918206 CTTGAGCCAGAATATTGATGCAAAAGAACCAGAAGAGAAGGTGCCTTCTACTGTGGCAAA 4918265 Query 33722 GGC---AATAAGT-CTCTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAGCCCAAT 33777 ||| || | || |||| | || | | ||| ||||| ||||||| Sbjct 4918266 GGCTGCAACACGTTCTCTGTGGGTAGCAT-CTTTGTTCACAATCCAACACAAGGCCCAAT 4918324 Query 33778 CGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCAT 33837 | |||| ||| || |||||||||||| |||| ||||| || |||||| | | |||| | Sbjct 4918325 CTGCCTCCTTCTTGACACAAGGCATCCTTTCGATGGCGTTGAAGAGAAATTCCCTTTCTT 4918384 Query 33838 TACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAA 33897 | | |||||||||| || || | || ||| ||| ||| || |||| |||||||| | Sbjct 4918385 TGTTGTCTTTAACAT--GTGTCAGTAAAGAGATTATCCATGTCAGAATATATGTTTTCCA 4918442 Query 33898 TGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTC-TGTACAAAAT 33956 | || || || || || ||||| || | || ||| || ||||| || || | || Sbjct 4918443 TAGCAATTTGGAAGCCATAGAAGCA---GGTTTCTGTAGCTTGAACTTCTTGGAC-ACAT 4918498 Query 33957 CGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGT 34016 | || | || |||| || ||||| ||| | |||||||| || | || | ||| Sbjct 4918499 TGCTCCACCAAGTTTTTATCAACTATGCCACGGCATGCTGCAAAGAAAGTCAGAATATGG 4918558 Query 34017 TTTATAAAATATTTTT 34032 |||||||||| ||| Sbjct 4918559 GATATAAAATATCTTT 4918574 >seq9 Length=44311105 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 62113 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62172 |||| ||||| || |||||||| || |||||| ||| | || || || || ||||| | Sbjct 1875011 TCCAGCCGTAGAAGTGCATACTTGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 1875070 Query 62173 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62232 ||| ||| || |||||||| ||||| || || || || |||||||| || | | || | Sbjct 1875071 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 1875130 Query 62233 TTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 1875131 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 1875181 Score = 109 bits (120), Expect = 7e-19 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322 || |||||||||||| |||||||| |||||||||||||| | ||| |||||||| | | Sbjct 1896017 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACG 1896076 Query 63323 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63382 ||||| || |||||||| ||||| || | ||| ||||| | | || || ||||||| Sbjct 1896077 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCA 1896136 Query 63383 CGGTTCCAAGTATATGGC 63400 || |||| ||| || || Sbjct 1896137 AGGCTCCAGGTAAATAGC 1896154 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447 || || |||||||| ||||| ||||| ||||| || || || ||||| || ||||| | Sbjct 1878112 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATA 1878171 Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507 ||||||||||| |||| || |||||||| || || || ||||| || || | | |||| Sbjct 1878172 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 1878231 Query 62508 CTATTTCTAAGACCGTA 62524 || ||||| | ||| || Sbjct 1878232 CTGTTTCTTATACCATA 1878248 Score = 95.1 bits (104), Expect = 2e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 62626 CATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGT 62685 |||| || ||||||||||| | || || || || | ||| || || || | || |||| Sbjct 1883222 CATAGGTTTCATATGGTCCATGCTCCTTGGCAAGGTCACAGCTGGCTTCCAGGGCTCCGT 1883281 Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGAT 62745 ||||||| ||||||||||||| |||||| | || ||||| | || ||||| || | Sbjct 1883282 AATAAATAGTTTCAAAGATCTGCTTATTCAATAACTGGGCTTCTGCACTCTCAAAAGGGT 1883341 Query 62746 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62805 | | | || ||||| || || || | ||||| || ||||| || || || | ||| | Sbjct 1883342 ATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGAC 1883401 Query 62806 TCTTATTAGA 62815 ||||| || Sbjct 1883402 GTTTATTTGA 1883411 >seq3 Length=58292249 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/210 (70%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 31344 AGATTGTACTTCTTCAAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCT 31403 || ||| |||||||| | |||||| ||| | || |||| | | || || || || |||| Sbjct 29419078 AGCTTGAACTTCTTCTATTTCTGGGTAAAAAATCCGTTCACAAATGAGTTGTGCAATTCG 29419137 Query 31404 ATCTCCAGTATTTACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTT 31463 ||| | | || || | |||| | ||| ||| ||||| || || || | ||| Sbjct 29419138 ATCATCTTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTGCAACACCAACGTT 29419197 Query 31464 TCCCCTATAATCTTCGTCTATTACACCGCCTCCTATATCAAT---GCCTTTTAGGGACAG 31520 ||| ||||||||||| ||||| ||||| |||||| |||||| | |||| | || Sbjct 29419198 TCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTTCAGCCAA 29419257 Query 31521 ACCAGACCTAGGAGCTATTCTACCATAGCA 31550 ||||||| |||||||| ||| || || || Sbjct 29419258 GCCAGACCGAGGAGCTACTCTTCCGTAACA 29419287 >seq1056 Length=1934 Score = 95.1 bits (104), Expect = 2e-14 Identities = 151/216 (70%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 31338 ATCTAGAGATTGTACTTCTTCAAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGC 31397 ||| | || ||| |||||||| | |||||| ||| | || |||| | | || ||||| || Sbjct 724 ATCCAAAGCTTGAACTTCTTCTATTTCTGGGTAAAAAATCCGTTCACAAATGAGCTGTGC 783 Query 31398 TATTCTATCTCCAGTATTTACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCC 31457 |||| ||| | | || || | |||| | ||| ||| |||| || | || || Sbjct 784 AATTCGATCCCTTTTTTTGACTTCAAACTTTTCTTTGCCAAAATTATACAGCACAACACC 843 Query 31458 TATGTTTCCCCTATAATCTTCGTCTATTACACCGCCTCCTATATCAAT---GCCTTTTAG 31514 | ||||| ||||||||||| ||||| ||||| |||||| |||||| | |||| Sbjct 844 AACATTTCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTGC 903 Query 31515 GGACAGACCAGACCTAGGAGCTATTCTACCATAGCA 31550 | || ||||||| ||||||| ||| |||| || Sbjct 904 AGCCAAGCCAGACCGTGGAGCTACTCTTTCATAACA 939 >seq22 Length=27210278 Score = 95.1 bits (104), Expect = 2e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 33842 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33901 |||||| | ||||| || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 23199818 ATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 23199877 Query 33902 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 33961 || || || || |||||||| | || || |||||||| |||||| | |||||| || Sbjct 23199878 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 23199937 >seq19 Length=29834108 Score = 93.3 bits (102), Expect = 5e-14 Identities = 92/119 (77%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548 |||||||||||||||| | ||| || | ||||||| ||| ||||||||| ||| ||| Sbjct 9025443 GTTACTTTCTATGATGTACATATTATTCTGCAAGCTTACATACTGACTACTGGAGTATTT 9025384 Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607 ||| | |||||| | |||||| ||| | ||||| |||||||| ||| | | | |||| Sbjct 9025383 TTTGGTTTGACTATGTATACTCTGCAAGCTAAGAGGGATTTCAGCAAATTAGGAGCAGG 9025325 Score = 86.0 bits (94), Expect = 8e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 188172 TGCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCAC 188231 || ||||| |||||||||||||||||||||| |||| ||||| || |||||||||||| Sbjct 9047806 TGTTCCTCAATCGAGGACGACTTCAACTATGGCAGCAGCGTGGCCTCCGCCAGCGTGCAC 9047747 Query 188232 ATACGAATGG 188241 || ||||||| Sbjct 9047746 ATCCGAATGG 9047737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629796453874080