Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq37 389 5e-103
seq5 241 2e-58
seq34 206 3e-48
seq111 149 8e-31
seq9 111 2e-19
seq3 98.7 1e-15
seq1056 95.1 2e-14
seq22 95.1 2e-14
seq19 93.3 5e-14
>seq37
Length=19344684
Score = 389 bits (430), Expect = 5e-103
Identities = 670/966 (69%), Gaps = 19/966 (2%)
Strand=Plus/Plus
Query 33211 GACAAATATCGGCATTTAT---GTTTCTTTAAAAGTCAACATCTAAAGAAAAATGATTGT 33267
|| ||||| |||| ||| ||| |||| |||||| || | || | |||| ||| |
Sbjct 211230 GAAAAATAAAGGCACATATTCAGTTGATTTAGAAGTCAGCACCCAAGGTAAAAGAATTCT 211289
Query 33268 CTTCTTGA---GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAAT 33324
|| | || ||||| |||||||| | || || | ||| || | || || || || |
Sbjct 211290 CTGTTGGACTTGACATCACTCCCATCCTCTGATACTTACCTACTCTCTTCTCAAAGAAGT 211349
Query 33325 TAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAA 33384
|||| |||||||||| ||| ||||| ||||| || ||||| ||||| || || |||
Sbjct 211350 TAGTGTTTCCTTCCAGTGAAATATTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAA 211409
Query 33385 tttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCA 33444
| |||| |||| ||| || | ||| ||||| || || || || ||| ||||
Sbjct 211410 CCCTGCTAAAACCCAGTTCCAGCATAAGTCTGTCTGCCACAAACTCAATGTATTGCTTCA 211469
Query 33445 TCATTTCACAATTCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTT 33504
| | |||||||| || ||||| || || || | ||| ||||||| || || ||||
Sbjct 211470 TTAGAGTGCAATTCATCCCAATGAGCTTCACAGGCAAGGCCTCAGTAAGGAACTCCTGTT 211529
Query 33505 CAATGGATACCGCATTTGTTATAATAAATCTAACGGTTTCTTCACTCGGTGGATGTAATA 33564
| || || ||| | | || || ||| || | || || ||| |||| |
Sbjct 211530 CCATCCGAACAGCACTGATAATTATTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTT 211589
Query 33565 AATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATT 33624
||||| ||||||| || |||||||| ||||| | |||||| ||||| | | | | ||
Sbjct 211590 GGTGTTTGAACATCAGGCAAGCGAAATCACAGTGTAAACCCTCATCTCTGCCAGTAAGTT 211649
Query 33625 CGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGA 33684
| |||||||| ||||| || ||||| || || || || || ||||| |||||||| || |
Sbjct 211650 CATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAA 211709
Query 33685 ATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAA-GTCTCTCTCCATA- 33742
| || || ||||||||||| ||||| |||||||||||||| || || | || |||||
Sbjct 211710 AAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTGCAACGTGT-TCACCATAG 211768
Query 33743 --ACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGC 33800
| | | |||| | ||| |||||||| |||||||| || |||||||||
Sbjct 211769 GTAGCCTCTTTGTCCCCAACCCAGAGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGC 211828
Query 33801 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCG 33860
|||||||| || ||||| |||||| | | |||| || |||||| | ||||| ||
Sbjct 211829 ATCGTTTCAATAGCATTGAAGAGAAATTCCCTTTCGTTGGGATCTTTTATGTAAGTGTCA 211888
Query 33861 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 33920
|| | |||||||| ||||| ||||| ||||||| |||||||| || || || ||||||
Sbjct 211889 ATAAGGAGACTATATATTTCAGAATGTATGTTTTTCATGGCCATTTGGAAGCCATAGAAA 211948
Query 33921 CATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACT 33980
|| || || || ||||| |||||| | |||||| || | || |||||||| |||
Sbjct 211949 CAGTGGGCTTCTGTGATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACT 212008
Query 33981 ATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGT 34040
|| |||| ||| |||||||| || |||| || || |||||| ||| | | || ||
Sbjct 212009 ATGCCATAACTTGCTGCAAAGAAAGCCAGAACGTGGGATATAAAGTATCTCCCCTCGGGC 212068
Query 34041 GTTAGTTTATTCCAATCATTG----ATATCTTTAGATATATCCACTTCTTCCACTGTCCA 34096
| || ||||| || || | || || || | ||||| || | |||||
Sbjct 212069 TTCAG-GGATTCC---CAGTGCCAAACGTCCTTGGACAGGTCCACCTCCTTGGTGGTCCA 212124
Query 34097 AAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAAT 34156
|| || ||||| |||| ||||| | | |||||| || | || | ||| ||||| ||
Sbjct 212125 GAAGGAGGCCTCCCCCTTCTTATATGTCTGCCAGATATCGGGGTACTCGATGGGGAATAT 212184
Query 34157 AACAAA 34162
|||||
Sbjct 212185 GACAAA 212190
>seq5
Length=50794693
Score = 241 bits (266), Expect = 2e-58
Identities = 685/1041 (66%), Gaps = 24/1041 (2%)
Strand=Plus/Minus
Query 63269 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGTTC 63328
|| |||||| |||||||| ||||||||||||| | ||| ||||||| | |||||
Sbjct 46265805 TCATTTCATGAAGAGATCTAGAATCCAAAGAGCAAAAAA--GATCTCTGGCATGCTGTTC 46265748
Query 63329 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 63388
| |||||| ||||||| || | ||| | || | | || || |||| || || ||
Sbjct 46265747 TTTCTTTCCTATATTCTTCTTTAAATCAAACAATTCAAAGATGTCTAAATGTCAAGGCTC 46265688
Query 63389 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 63448
|| ||| || || | ||||||| | ||||| || || |||| | |||| ||| ||
Sbjct 46265687 CAGGTAAATAGCAAATGCTCCAGGACCCTTGTTCCCACCTCGATCCAGATATCAAGCTGT 46265628
Query 63449 GTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGAT 63508
||| ||||| ||||||| ||| | || || || || | || || | || ||
Sbjct 46265627 GTTGTTATATACTCTCAGCATCAGTGCAAGGCCATTGGAATTGCCCTTAGACCCATCAAT 46265568
Query 63509 ATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 63568
|||| ||| | || | |||| ||| | | | ||| ||||| || || ||||||
Sbjct 46265567 GTAGCTGCCAGTAGCCCAAATACAACTCAAAGCAACACCAATTCCTCCAGCAGATTTAGA 46265508
Query 63569 GATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATGTT 63628
|| || || ||| | |||| |||||||| |||||||| ||||| || || ||||| |
Sbjct 46265507 AATCAACGCACATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCGTCTTTCATGCT 46265448
Query 63629 AAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGAGA 63688
|| |||||||||||||| | ||| | | | || || ||| | || || || || ||
Sbjct 46265447 CAGAAGAAAACAGCTAGAAAGTTGTGGGTGGTTGGTACCAGCACTGAAGAAAGTTGGTGA 46265388
Query 63689 AGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGT---ACGTCTCAATAGCTGAGTCTAT 63745
||| || |||||||| | |||| ||| ||| ||| || ||||| ||| || ||
Sbjct 46265387 AGCATGAGTAAACCACCTCTCAGGAAGAAGACTGTCTGCTGTTTCAATTGCTACATCAAT 46265328
Query 63746 ATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAA 63804
||| | ||| || || || || | || | ||| ||||| | ||| ||| ||||| | |
Sbjct 46265327 ATCTTCTTTGTTG-ATCCCAACAGATACTCTCATCAACATATACTGTGGTATTTCAGCCA 46265269
Query 63805 TTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 63864
||| || || |||||||| || || | | | ||||||||||| || ||||
Sbjct 46265268 CTTTTCCATTGATCTTCAACAAATAAGACAACTGTAGCATCTTAAAACCAAAGTAATTGT 46265209
Query 63865 ATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTA 63924
| || || ||| | | |||||| | ||||| | | ||| |||| ||| |
Sbjct 46265208 AAGAGAAATCTTAGCCACAGATAATAGCAGAATTCAAGTGATCTTTATTGGCCAAAACAA 46265149
Query 63925 TATCCA-TGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATA 63982
|||||| || | |||| | | || ||||| |||| ||| | ||| | || |
Sbjct 46265148 TATCCAGTGCT--GACTTGGCCACCATGGGAGAGCGTTTGTCATGATGTGGACTTACGCA 46265091
Query 63983 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGA 64042
||| | | || |||||||| ||||| || | || |||||||| ||||| | || ||
Sbjct 46265090 GTTATAGAGGTCTTCCATCACATCACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGA 46265031
Query 64043 TATGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGC 64102
| || | || || || || || ||||| | || || | ||||| ||| ||||||
Sbjct 46265030 GACAGCAGTCCTAGCTGCCAGGATAGCATAGACAGGGTGCTTAGTAGT-CAA--GGCTGC 46264974
Query 64103 TATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAAT 64162
| | | | | || | ||| | | | || || ||| | || | | ||| ||
Sbjct 46264973 --------CGCCAAAAATATCTAGTTCCATCATAGTGACCCCACTGTACAAGCATTGGAT 46264922
Query 64163 AACCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTT 64222
|| ||||| | || | | ||||| | | |||| | | |||||| || || |
Sbjct 46264921 TACTTTCATGGTGATCTGAGCGGGATCAACAAAATCCACAATGAGGCCATAACA-AAGCT 46264863
Query 64223 TCT-AATACGAGACGTGATTTTATCAAACATGACATTTTCCTTGTATCCATTTCGTTTAA 64281
||| || ||||| | ||||| ||||| ||||| | | || |||| | | || |
Sbjct 46264862 TCTGGATTCGAGATTTAATTTTGTCAAATATGACTCGCTTTTGGTGGCCATCTTGCTTGA 46264803
Query 64282 TGACAAACATTTTTGTTGGTG 64302
| ||| |||| || | |||||
Sbjct 46264802 TCACACACATCTTAGCTGGTG 46264782
>seq34
Length=20716200
Score = 206 bits (228), Expect = 3e-48
Identities = 210/274 (77%), Gaps = 0/274 (0%)
Strand=Plus/Plus
Query 188378 GGATCTATAGGCTTGATTTTCGCATTGACTTTACACAGACATAAACATCCCCTGAATCTG 188437
|||||| | || |||||||| |||||||||||| |||| ||| ||||||| || |||
Sbjct 20502836 GGATCTCTGGGTTTGATTTTTGCATTGACTTTAAACAGCTGTAAGTATCCCCTTAACCTG 20502895
Query 188438 TACCTACTTTGTGGATTTACACTGTTAGAATCTCTAACGCTGGCCTCTGTTGTTACTTTC 188497
| ||| |||| ||||||||||||||| | | |||| || |||| |||||||||||||
Sbjct 20502896 TGCCTGCTTTTTGGATTTACACTGTTGGGAGCTCTGACTGTGGCAGTTGTTGTTACTTTC 20502955
Query 188498 TATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTTCTTGCTCTG 188557
|||||| |||| || | ||||||||||| ||||||||||||| || || | ||
Sbjct 20502956 TATGATATATGTATTATTCTGCAAGCTTTCATACTGACTACTGCAGTAATTTTTAGTTTG 20503015
Query 188558 ACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGGATTGTTTGCT 188617
||| |||||| ||||| ||||| |||||||| ||| ||| | |||| ||||||||
Sbjct 20503016 ACTGTGAATACTCTGCAATCTAAGAGGGATTTCAGCAAATTTGGAGCAGGGCTGTTTGCT 20503075
Query 188618 GCTTTCTGGATTTTAATTTTGTCAGGAGTCTTGA 188651
||| | |||||| |||||||| ||||||
Sbjct 20503076 CTTTTGTAGATTTTGTGCCTGTCAGGATTCTTGA 20503109
>seq111
Length=7367144
Score = 149 bits (164), Expect = 8e-31
Identities = 299/436 (69%), Gaps = 12/436 (3%)
Strand=Plus/Plus
Query 33602 ACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTT 33661
|||||| || || ||||| | ||| || ||||| ||||| || | ||| || | | ||
Sbjct 4918146 ACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGACATCAGTCATTGTTT 4918205
Query 33662 TTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAA 33721
|| ||||| ||||| || || || || || ||| ||||| | |||||||||| |||||
Sbjct 4918206 CTTGAGCCAGAATATTGATGCAAAAGAACCAGAAGAGAAGGTGCCTTCTACTGTGGCAAA 4918265
Query 33722 GGC---AATAAGT-CTCTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAGCCCAAT 33777
||| || | || |||| | || | | ||| ||||| |||||||
Sbjct 4918266 GGCTGCAACACGTTCTCTGTGGGTAGCAT-CTTTGTTCACAATCCAACACAAGGCCCAAT 4918324
Query 33778 CGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCAT 33837
| |||| ||| || |||||||||||| |||| ||||| || |||||| | | |||| |
Sbjct 4918325 CTGCCTCCTTCTTGACACAAGGCATCCTTTCGATGGCGTTGAAGAGAAATTCCCTTTCTT 4918384
Query 33838 TACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAA 33897
| | |||||||||| || || | || ||| ||| ||| || |||| |||||||| |
Sbjct 4918385 TGTTGTCTTTAACAT--GTGTCAGTAAAGAGATTATCCATGTCAGAATATATGTTTTCCA 4918442
Query 33898 TGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTC-TGTACAAAAT 33956
| || || || || || ||||| || | || ||| || ||||| || || | ||
Sbjct 4918443 TAGCAATTTGGAAGCCATAGAAGCA---GGTTTCTGTAGCTTGAACTTCTTGGAC-ACAT 4918498
Query 33957 CGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGT 34016
| || | || |||| || ||||| ||| | |||||||| || | || | |||
Sbjct 4918499 TGCTCCACCAAGTTTTTATCAACTATGCCACGGCATGCTGCAAAGAAAGTCAGAATATGG 4918558
Query 34017 TTTATAAAATATTTTT 34032
|||||||||| |||
Sbjct 4918559 GATATAAAATATCTTT 4918574
>seq9
Length=44311105
Score = 111 bits (122), Expect = 2e-19
Identities = 127/171 (74%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 62113 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 62172
|||| ||||| || |||||||| || |||||| ||| | || || || || ||||| |
Sbjct 1875011 TCCAGCCGTAGAAGTGCATACTTGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 1875070
Query 62173 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 62232
||| ||| || |||||||| ||||| || || || || |||||||| || | | || |
Sbjct 1875071 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 1875130
Query 62233 TTTGTGCAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 62283
| || | |||||||| | ||||||||||| | |||| | || || ||||
Sbjct 1875131 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 1875181
Score = 109 bits (120), Expect = 7e-19
Identities = 107/138 (78%), Gaps = 0/138 (0%)
Strand=Plus/Plus
Query 63263 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCT 63322
|| |||||||||||| |||||||| |||||||||||||| | ||| |||||||| | |
Sbjct 1896017 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACG 1896076
Query 63323 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCA 63382
||||| || |||||||| ||||| || | ||| ||||| | | || || |||||||
Sbjct 1896077 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCA 1896136
Query 63383 CGGTTCCAAGTATATGGC 63400
|| |||| ||| || ||
Sbjct 1896137 AGGCTCCAGGTAAATAGC 1896154
Score = 104 bits (114), Expect = 3e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 62388 ACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACC 62447
|| || |||||||| ||||| ||||| ||||| || || || ||||| || ||||| |
Sbjct 1878112 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATA 1878171
Query 62448 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 62507
||||||||||| |||| || |||||||| || || || ||||| || || | | ||||
Sbjct 1878172 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 1878231
Query 62508 CTATTTCTAAGACCGTA 62524
|| ||||| | ||| ||
Sbjct 1878232 CTGTTTCTTATACCATA 1878248
Score = 95.1 bits (104), Expect = 2e-14
Identities = 135/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 62626 CATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAATGCACCGT 62685
|||| || ||||||||||| | || || || || | ||| || || || | || ||||
Sbjct 1883222 CATAGGTTTCATATGGTCCATGCTCCTTGGCAAGGTCACAGCTGGCTTCCAGGGCTCCGT 1883281
Query 62686 AATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATCAAATGGAT 62745
||||||| ||||||||||||| |||||| | || ||||| | || ||||| || |
Sbjct 1883282 AATAAATAGTTTCAAAGATCTGCTTATTCAATAACTGGGCTTCTGCACTCTCAAAAGGGT 1883341
Query 62746 AATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 62805
| | | || ||||| || || || | ||||| || ||||| || || || | ||| |
Sbjct 1883342 ATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGAC 1883401
Query 62806 TCTTATTAGA 62815
||||| ||
Sbjct 1883402 GTTTATTTGA 1883411
>seq3
Length=58292249
Score = 98.7 bits (108), Expect = 1e-15
Identities = 148/210 (70%), Gaps = 3/210 (1%)
Strand=Plus/Plus
Query 31344 AGATTGTACTTCTTCAAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCT 31403
|| ||| |||||||| | |||||| ||| | || |||| | | || || || || ||||
Sbjct 29419078 AGCTTGAACTTCTTCTATTTCTGGGTAAAAAATCCGTTCACAAATGAGTTGTGCAATTCG 29419137
Query 31404 ATCTCCAGTATTTACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTT 31463
||| | | || || | |||| | ||| ||| ||||| || || || | |||
Sbjct 29419138 ATCATCTTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTGCAACACCAACGTT 29419197
Query 31464 TCCCCTATAATCTTCGTCTATTACACCGCCTCCTATATCAAT---GCCTTTTAGGGACAG 31520
||| ||||||||||| ||||| ||||| |||||| |||||| | |||| | ||
Sbjct 29419198 TCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTTCAGCCAA 29419257
Query 31521 ACCAGACCTAGGAGCTATTCTACCATAGCA 31550
||||||| |||||||| ||| || || ||
Sbjct 29419258 GCCAGACCGAGGAGCTACTCTTCCGTAACA 29419287
>seq1056
Length=1934
Score = 95.1 bits (104), Expect = 2e-14
Identities = 151/216 (70%), Gaps = 3/216 (1%)
Strand=Plus/Plus
Query 31338 ATCTAGAGATTGTACTTCTTCAAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGC 31397
||| | || ||| |||||||| | |||||| ||| | || |||| | | || ||||| ||
Sbjct 724 ATCCAAAGCTTGAACTTCTTCTATTTCTGGGTAAAAAATCCGTTCACAAATGAGCTGTGC 783
Query 31398 TATTCTATCTCCAGTATTTACATTAAACGTACATTTTCCATTATTAATAAGAATGACTCC 31457
|||| ||| | | || || | |||| | ||| ||| |||| || | || ||
Sbjct 784 AATTCGATCCCTTTTTTTGACTTCAAACTTTTCTTTGCCAAAATTATACAGCACAACACC 843
Query 31458 TATGTTTCCCCTATAATCTTCGTCTATTACACCGCCTCCTATATCAAT---GCCTTTTAG 31514
| ||||| ||||||||||| ||||| ||||| |||||| |||||| | ||||
Sbjct 844 AACATTTCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTGC 903
Query 31515 GGACAGACCAGACCTAGGAGCTATTCTACCATAGCA 31550
| || ||||||| ||||||| ||| |||| ||
Sbjct 904 AGCCAAGCCAGACCGTGGAGCTACTCTTTCATAACA 939
>seq22
Length=27210278
Score = 95.1 bits (104), Expect = 2e-14
Identities = 93/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 33842 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 33901
|||||| | ||||| || || | |||||||||||||| ||||| |||||||| |||||
Sbjct 23199818 ATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 23199877
Query 33902 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 33961
|| || || || |||||||| | || || |||||||| |||||| | |||||| ||
Sbjct 23199878 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 23199937
>seq19
Length=29834108
Score = 93.3 bits (102), Expect = 5e-14
Identities = 92/119 (77%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 188489 GTTACTTTCTATGATGCGCGTATCGTTATACAAGCTTTCATGTTGACTACTGCAGTGTTT 188548
|||||||||||||||| | ||| || | ||||||| ||| ||||||||| ||| |||
Sbjct 9025443 GTTACTTTCTATGATGTACATATTATTCTGCAAGCTTACATACTGACTACTGGAGTATTT 9025384
Query 188549 CTTGCTCTGACTACATGTACTCTACAATCAAAGAGAGATTTCAGTAAACTTGTAACAGG 188607
||| | |||||| | |||||| ||| | ||||| |||||||| ||| | | | ||||
Sbjct 9025383 TTTGGTTTGACTATGTATACTCTGCAAGCTAAGAGGGATTTCAGCAAATTAGGAGCAGG 9025325
Score = 86.0 bits (94), Expect = 8e-12
Identities = 61/70 (87%), Gaps = 0/70 (0%)
Strand=Plus/Minus
Query 188172 TGCTCCTCCATCGAGGACGACTTCAACTATGACAGCTCGGTGGCGTCTGCCAGCGTGCAC 188231
|| ||||| |||||||||||||||||||||| |||| ||||| || ||||||||||||
Sbjct 9047806 TGTTCCTCAATCGAGGACGACTTCAACTATGGCAGCAGCGTGGCCTCCGCCAGCGTGCAC 9047747
Query 188232 ATACGAATGG 188241
|| |||||||
Sbjct 9047746 ATCCGAATGG 9047737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629796453874080
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