Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20 2011-11-17] 2,686 sequences; 2,608,588,537 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq37 343 2e-89 seq34 336 3e-87 seq5 246 4e-60 seq19 170 3e-37 seq111 149 8e-31 seq9 113 6e-20 seq22 100 4e-16 seq1056 91.5 2e-13 >seq37 Length=19344684 Score = 343 bits (380), Expect = 2e-89 Identities = 578/829 (70%), Gaps = 13/829 (2%) Strand=Plus/Plus Query 35787 GACAAATATCGGCATTTAT---GTTTCTTTAAAAATCAACATCTAGAGAAAAATGATTGT 35843 || ||||| |||| ||| ||| |||| || ||| || | | | |||| ||| | Sbjct 211230 GAAAAATAAAGGCACATATTCAGTTGATTTAGAAGTCAGCACCCAAGGTAAAAGAATTCT 211289 Query 35844 CTTCTTGA---GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAAT 35900 || | || ||||| |||||||| | || || | ||| || | || || || || | Sbjct 211290 CTGTTGGACTTGACATCACTCCCATCCTCTGATACTTACCTACTCTCTTCTCAAAGAAGT 211349 Query 35901 TAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAA 35960 |||| || ||||| | ||| ||||| ||||| || || |||||||| || | ||| Sbjct 211350 TAGTGTTTCCTTCCAGTGAAATATTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAA 211409 Query 35961 tttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCA 36020 | |||| |||| ||| || | ||| ||||| ||||| || || ||| |||| Sbjct 211410 CCCTGCTAAAACCCAGTTCCAGCATAAGTCTGTCTGCCACAAACTCAATGTATTGCTTCA 211469 Query 36021 TCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTT 36080 | | |||||||| || || || || || || | ||| ||||||| || || |||| Sbjct 211470 TTAGAGTGCAATTCATCCCAATGAGCTTCACAGGCAAGGCCTCAGTAAGGAACTCCTGTT 211529 Query 36081 CAATAGAGACCGCGTCTGTTA-TAATAGATATTACTGTTTCTTCACTCGGTGGATACAAT 36139 | || || || ||| || | || | ||||| | || || ||| | | | Sbjct 211530 CCATCCGAACAGCA-CTGATAATTATTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACT 211588 Query 36140 AAATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAAT 36199 ||||| ||||||| || |||||||| ||||||| |||||| ||||| | | | | | Sbjct 211589 TGGTGTTTGAACATCAGGCAAGCGAAATCACAGTGTAAACCCTCATCTCTGCCAGTAAGT 211648 Query 36200 TCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA 36259 || || ||||| ||||| || ||||| || || || || || ||||| |||||||| ||| Sbjct 211649 TCATTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCA 211708 Query 36260 AATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAA-GTCTCTCTCCATA 36318 || || ||||||||||| || ||||| ||||| |||||||| || || | || ||||| Sbjct 211709 AAAGAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTGCAACGTGT-TCACCATA 211767 Query 36319 ---ACCGGCACTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGG 36375 | | | |||| | ||| |||||||| |||||||| || |||||||| Sbjct 211768 GGTAGCCTCTTTGTCCCCAACCCAGAGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGG 211827 Query 36376 CATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATC 36435 ||| || || |||||||| |||||| | | |||| || |||||| | || || || Sbjct 211828 CATCGTTTCAATAGCATTGAAGAGAAATTCCCTTTCGTTGGGATCTTTTATGTAAGTGTC 211887 Query 36436 AATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAA 36495 ||| | |||||||| ||||| ||||| ||||||| ||||||||||| || || ||||| Sbjct 211888 AATAAGGAGACTATATATTTCAGAATGTATGTTTTTCATGGCCATTTGGAAGCCATAGAA 211947 Query 36496 ACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCAC 36555 ||| || || || ||||| |||||| | |||||| || | || |||||||| || Sbjct 211948 ACAGTGGGCTTCTGTGATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTAC 212007 Query 36556 TATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATAT 36604 ||| || | ||| |||||||| || |||| || || |||||| ||| Sbjct 212008 TATGCCATAACTTGCTGCAAAGAAAGCCAGAACGTGGGATATAAAGTAT 212056 >seq34 Length=20716200 Score = 336 bits (372), Expect = 3e-87 Identities = 364/481 (76%), Gaps = 1/481 (0%) Strand=Plus/Minus Query 9227 TTATTTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATTGATGATATC 9286 ||| || |||||| | ||||| || | |||||| |||| ||| |||||||||||||| Sbjct 20503317 TTACTTTTTATTAACTGCTTCCCGAAACC-TAACAGGTGCAGGAATAGATTGATGATATC 20503259 Query 9287 CAAGTAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATGTATTAGTGA 9346 || ||||| |||| | | ||| | || |||||||| || || ||||| | ||||| Sbjct 20503258 CATGTAGAGGCTGATGGCAGTTAATAGGTACTCTTCAGGTGACAGTTTATGCCTCAGTGA 20503199 Query 9347 GTGCGTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGACAGGACCAG 9406 || ||||||||||| |||||||| || || | |||||| ||||| | ||||| Sbjct 20503198 GTATGTGTCATAGATGATGAATCCACAAAAAAGAAGGGCTTTTGCAGCAGCTAAGACCAA 20503139 Query 9407 CTCCACTGTTTCACTTTGCACAAATATCCTCAAAAGTCCTGACAAAATTAAAATCCACAA 9466 ||||| ||| ||||| | | ||||| | |||| | |||||||| |||||| |||| Sbjct 20503138 CTCCATTGTCTCACTATAAAAAAATAACTTCAAGAATCCTGACAGGCACAAAATCTACAA 20503079 Query 9467 AGTAACAAACAATCCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGC 9526 | | |||||| |||||||||| ||| |||||||| ||||| ||||| ||||||| | Sbjct 20503078 AAGAGCAAACAGCCCTGCTCCAAATTTGCTGAAATCCCTCTTAGATTGCAGAGTATTCAC 20503019 Query 9527 AGTCAGAGCAAGAAACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATC 9586 ||||| | || || |||||||||||||| ||||||||||||| || | | | ||| Sbjct 20503018 AGTCAAACTAAAAATTACTGCAGTAGTCAGTATGAAAGCTTGCAGAATAATACATATATC 20502959 Query 9587 ATAGAAAGTAACAACAGAGGCCAGCGTTAGAGATTCCGACAGTGTAAATCCACAAAGCAG 9646 |||||||||||||||| |||| || |||| | || |||||||||||||| ||||||| Sbjct 20502958 ATAGAAAGTAACAACAACTGCCACAGTCAGAGCTCCCAACAGTGTAAATCCAAAAAGCAG 20502899 Query 9647 GTATAAATTCAGGGGATGTTTATGTCTGTGTAAAGTCAATGCGAAAATCAAGCCTATAGA 9706 | | | || ||||||| ||| |||| |||||||||||| |||||||| || | ||| Sbjct 20502898 GCACAGGTTAAGGGGATACTTACAGCTGTTTAAAGTCAATGCAAAAATCAAACCCAGAGA 20502839 Query 9707 T 9707 | Sbjct 20502838 T 20502838 >seq5 Length=50794693 Score = 246 bits (272), Expect = 4e-60 Identities = 658/994 (66%), Gaps = 24/994 (2%) Strand=Plus/Minus Query 66062 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCTATGTTC 66121 || |||||| |||||||| ||||||||||||| | ||| | ||||||| ||||| Sbjct 46265805 TCATTTCATGAAGAGATCTAGAATCCAAAGAGCAAAAAAGA--TCTCTGGCATGCTGTTC 46265748 Query 66122 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCACGGTTC 66181 | |||||| ||||||| || | ||| | || | | || || |||| || || || Sbjct 46265747 TTTCTTTCCTATATTCTTCTTTAAATCAAACAATTCAAAGATGTCTAAATGTCAAGGCTC 46265688 Query 66182 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 66241 || ||| || || | ||||||| | ||||| || || |||| | |||| ||| || Sbjct 46265687 CAGGTAAATAGCAAATGCTCCAGGACCCTTGTTCCCACCTCGATCCAGATATCAAGCTGT 46265628 Query 66242 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGAT 66301 ||| ||||| ||||||| ||| | || |||||||| | || || | ||| || Sbjct 46265627 GTTGTTATATACTCTCAGCATCAGTGCAAGGCCATTGGAATTGCCCTTAGACCCATCAAT 46265568 Query 66302 ATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 66361 ||||| ||| | || | |||| ||| | | | ||| ||||| || || |||||| Sbjct 46265567 GTAGCTGCCAGTAGCCCAAATACAACTCAAAGCAACACCAATTCCTCCAGCAGATTTAGA 46265508 Query 66362 GATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTT 66421 || || || ||| | |||| || ||||| ||||| || || || || || ||||| | Sbjct 46265507 AATCAACGCACATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCGTCTTTCATGCT 46265448 Query 66422 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 66481 || |||||||||||||| | ||| | | | || || ||| | || || || || || Sbjct 46265447 CAGAAGAAAACAGCTAGAAAGTTGTGGGTGGTTGGTACCAGCACTGAAGAAAGTTGGTGA 46265388 Query 66482 AGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGT---ACGTCTCAATAGCTGAGTCTAT 66538 ||| || |||||||| | |||| ||| ||| ||| || ||||| ||| || || Sbjct 46265387 AGCATGAGTAAACCACCTCTCAGGAAGAAGACTGTCTGCTGTTTCAATTGCTACATCAAT 46265328 Query 66539 ATC-CCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 66597 ||| | ||| || || || || | || | ||| ||||| | ||| ||| ||||| | | Sbjct 46265327 ATCTTCTTTGTTG-ATCCCAACAGATACTCTCATCAACATATACTGTGGTATTTCAGCCA 46265269 Query 66598 TCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 66657 || || || |||||||| || || | | | ||||||||||| || |||| Sbjct 46265268 CTTTTCCATTGATCTTCAACAAATAAGACAACTGTAGCATCTTAAAACCAAAGTAATTGT 46265209 Query 66658 ATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTA 66717 | || || ||| | | |||||| | || || | | ||| |||| ||| | Sbjct 46265208 AAGAGAAATCTTAGCCACAGATAATAGCAGAATTCAAGTGATCTTTATTGGCCAAAACAA 46265149 Query 66718 CATCCA-TGGTAATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTGACATA 66775 ||||| || | |||| | | || ||||| |||| ||| | ||| | || | Sbjct 46265148 TATCCAGTGCT--GACTTGGCCACCATGGGAGAGCGTTTGTCATGATGTGGACTTACGCA 46265091 Query 66776 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGA 66835 ||| | | || |||||||| ||||| || | || |||||||||||||| | || || Sbjct 46265090 GTTATAGAGGTCTTCCATCACATCACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGA 46265031 Query 66836 TACGGCTATTCTAGCGGCTATAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGC 66895 || || | ||||| || | || ||||| | || || | ||||| ||| |||||| Sbjct 46265030 GACAGCAGTCCTAGCTGCCAGGATAGCATAGACAGGGTGCTTAGTAGT-CAA--GGCTGC 46264974 Query 66896 TATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGAT 66955 | | | | | || | ||| | | | || || ||| | || | | |||||| Sbjct 46264973 --------CGCCAAAAATATCTAGTTCCATCATAGTGACCCCACTGTACAAGCATTGGAT 46264922 Query 66956 AACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTT 67015 || ||||| | || | | ||||| | | ||| | | ||||||||| || | Sbjct 46264921 TACTTTCATGGTGATCTGAGCGGGATCAACAAAATCCACAATGAGGCCATAACA-AAGCT 46264863 Query 67016 TCT-AATACGAGATGTGATTTTATCAAACATGAC 67048 ||| || |||||| | ||||| ||||| ||||| Sbjct 46264862 TCTGGATTCGAGATTTAATTTTGTCAAATATGAC 46264829 >seq19 Length=29834108 Score = 170 bits (188), Expect = 3e-37 Identities = 167/215 (78%), Gaps = 3/215 (1%) Strand=Plus/Plus Query 9218 TTTTAAACTTTATTTCTTATTAGATACTTCCAAAAGCTGTAACAGATGCAAGAACAGATT 9277 |||||| ||| || |||||| | |||||| || | ||||||| |||| ||| ||||| Sbjct 9017553 TTTTAA---TTACTTTTTATTAACTGCTTCCAGAAACCGTAACAGGTGCAGGAATAGATT 9017609 Query 9278 GATGATATCCAAGTAGAAATTGATAGAGGCTAACACATAGTCTTCAGGCGAGAGCTTATG 9337 ||| || |||||||||| |||||| ||||| | || |||||||| || || ||||| Sbjct 9017610 GATAATGTCCAAGTAGAGGCTGATAGCAGCTAATATGTATTCTTCAGGTGACAGTTTATG 9017669 Query 9338 TATTAGTGAGTGCGTGTCATAGATAATGAATCCGCAGAATACAAGGGCCCCAAAAGCAGA 9397 || |||||||| ||||||||||| |||||||| ||||| | |||||| || ||||| Sbjct 9017670 CATCAGTGAGTGTGTGTCATAGATGATGAATCCACAGAAAAGAAGGGCTCCTGCAGCAGC 9017729 Query 9398 CAGGACCAGCTCCACTGTTTCACTTTGCACAAATA 9432 | ||||| ||||||||| ||||| | | ||||| Sbjct 9017730 TAAGACCAACTCCACTGTCTCACTATAAAAAAATA 9017764 Score = 116 bits (128), Expect = 5e-21 Identities = 97/119 (82%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 9480 CCTGCTCCAAGTTTACTGAAATCTCTCTTTGATTGTAGAGTATATGCAGTCAGAGCAAGA 9539 |||||||| | ||| |||||||| ||||| | ||| |||||||| ||||| | ||| | Sbjct 9025325 CCTGCTCCTAATTTGCTGAAATCCCTCTTAGCTTGCAGAGTATACATAGTCAAACCAAAA 9025384 Query 9540 AACACTGCAGTAGTCAGCATGAAAGCTTGCATAACGACATGCACATCATAGAAAGTAAC 9598 || ||| |||||||||| ||| ||||||||| || | ||| ||||||||||||||||| Sbjct 9025385 AATACTCCAGTAGTCAGTATGTAAGCTTGCAGAATAATATGTACATCATAGAAAGTAAC 9025443 Score = 98.7 bits (108), Expect = 1e-15 Identities = 85/103 (83%), Gaps = 3/103 (3%) Strand=Plus/Plus Query 9847 CCATTCGTATGTGCACACTGGCAGACGCCACCGAGCTGCCATAGTTGAAGTCGTCCTCGA 9906 ||||||| |||||||| ||||| || ||||| |||||||||||||||||||||||||| Sbjct 9047737 CCATTCGGATGTGCACGCTGGCGGAGGCCACGCTGCTGCCATAGTTGAAGTCGTCCTCGA 9047796 Query 9907 TGGAGGAGCACGCGTA--GAGGCTCGGCAT-GGCCATGGCGGC 9946 | ||||| || | ||| | | |||| || |||||||||||| Sbjct 9047797 TTGAGGAACAAGGGTACCGGGCATCGGGATCGGCCATGGCGGC 9047839 >seq111 Length=7367144 Score = 149 bits (164), Expect = 8e-31 Identities = 301/439 (69%), Gaps = 12/439 (3%) Strand=Plus/Plus Query 36175 TAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACG 36234 || |||||| || || ||||| | ||| |||||||| ||||| || | ||| || | | Sbjct 4918143 TAAACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGACATCAGTCATTG 4918202 Query 36235 CTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGC 36294 || || ||||| ||||| || ||||| || |||||| |||| | |||||||||| || Sbjct 4918203 TTTCTTGAGCCAGAATATTGATGCAAAAGAACCAGAAGAGAAGGTGCCTTCTACTGTGGC 4918262 Query 36295 AAAGGC---AATAAGT-CTCTCTCCATAACCGGCACTGTCATGTATCCACTTTTGAGCCC 36350 |||||| || | || |||| | || | | ||| ||||| |||| Sbjct 4918263 AAAGGCTGCAACACGTTCTCTGTGGGTAGCAT-CTTTGTTCACAATCCAACACAAGGCCC 4918321 Query 36351 AATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGttttttt 36410 |||| |||| ||| || ||||||||||| | || || || || |||||| | | ||| Sbjct 4918322 AATCTGCCTCCTTCTTGACACAAGGCATCCTTTCGATGGCGTTGAAGAGAAATTCCCTTT 4918381 Query 36411 CATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTT 36470 | || | |||||||| |||| ||| | || ||| ||| ||| || |||| ||||||| Sbjct 4918382 CTTTGTTGTCTTTAAC--ATGTGTCAGTAAAGAGATTATCCATGTCAGAATATATGTTTT 4918439 Query 36471 CAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTC-TGTACAA 36529 | || || ||||| || || ||||| || | || ||| || ||||| || || | Sbjct 4918440 CCATAGCAATTTGGAAGCCATAGAAGCA---GGTTTCTGTAGCTTGAACTTCTTGGAC-A 4918495 Query 36530 AATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACA 36589 || | || | || |||| || ||||| || | |||||||| || | || | | Sbjct 4918496 CATTGCTCCACCAAGTTTTTATCAACTATGCCACGGCATGCTGCAAAGAAAGTCAGAATA 4918555 Query 36590 TGTTTTATAAAATATTTTT 36608 || |||||||||| ||| Sbjct 4918556 TGGGATATAAAATATCTTT 4918574 >seq9 Length=44311105 Score = 113 bits (124), Expect = 6e-20 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 65181 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACA 65240 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | | Sbjct 1878112 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATA 1878171 Query 65241 GACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAA 65300 ||||||||||| |||| || |||||||| || || || ||||| || || | | |||| Sbjct 1878172 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 1878231 Query 65301 CTATTTCTAAGACCGTA 65317 || ||||| | ||| || Sbjct 1878232 CTGTTTCTTATACCATA 1878248 Score = 111 bits (122), Expect = 2e-19 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 64906 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 64965 |||| ||||| || |||||||| || |||||| ||| | || || || || ||||| | Sbjct 1875011 TCCAGCCGTAGAAGTGCATACTTGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 1875070 Query 64966 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 65025 ||| ||| || |||||||| ||||| || || || || |||||||| || | | || | Sbjct 1875071 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 1875130 Query 65026 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 65076 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 1875131 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 1875181 Score = 109 bits (120), Expect = 7e-19 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 66056 CTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAATCTCTGGTTCT 66115 || |||||||||||| |||||||| |||||||||||||| | ||| | |||||||| | Sbjct 1896017 CTCCACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACG 1896076 Query 66116 ATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCATAATGCCA 66175 ||||| || |||||||| ||||| || | ||| ||||| | | || || ||||||| Sbjct 1896077 CTGTTCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCA 1896136 Query 66176 CGGTTCCAAGTATATGGC 66193 || |||| ||| || || Sbjct 1896137 AGGCTCCAGGTAAATAGC 1896154 Score = 102 bits (112), Expect = 1e-16 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 66799 CACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAA 66858 |||| || | ||| |||||||||||||| | || || ||||| || || || || | | Sbjct 1910898 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCAATCCTGGCTGCCAGGA 1910957 Query 66859 TGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCA 66918 | ||||| || ||||| | ||||| | || || ||| |||| || |||| ||| || | Sbjct 1910958 TAGCATAGTCAGGATGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 1911017 Query 66919 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 ||| ||||| || || ||| | || | |||||||| |||||||| Sbjct 1911018 GTTCCACCGTGGTGACCCCACTGTACAAGCCTTGGATTACCTTCAT 1911063 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 65419 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGT 65478 |||| || || |||||||| | || || || || ||||| || || || | || |||| Sbjct 1883222 CATAGGTTTCATATGGTCCATGCTCCTTGGCAAGGTCACAGCTGGCTTCCAGGGCTCCGT 1883281 Query 65479 AATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGAT 65538 ||||||| ||||| ||||||| |||||| | || ||||| || ||||| || | Sbjct 1883282 AATAAATAGTTTCAAAGATCTGCTTATTCAATAACTGGGCTTCTGCACTCTCAAAAGGGT 1883341 Query 65539 AATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTC 65598 | | | || ||||| || ||||| | ||||| || ||||| || || || | ||| | Sbjct 1883342 ATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGAC 1883401 Query 65599 TCTTATTAGA 65608 ||||| || Sbjct 1883402 GTTTATTTGA 1883411 >seq22 Length=27210278 Score = 100 bits (110), Expect = 4e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 36418 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 36477 |||||| | || || ||||| | |||||||||||||| ||||| |||||||| ||||| Sbjct 23199818 ATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 23199877 Query 36478 CATTTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 36537 ||||| || || |||||||| | || || |||||||| |||||| | |||||| || Sbjct 23199878 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 23199937 >seq1056 Length=1934 Score = 91.5 bits (100), Expect = 2e-13 Identities = 150/216 (69%), Gaps = 3/216 (1%) Strand=Plus/Plus Query 33939 ATCTAGAGATTGTACTTCTTTCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGC 33998 ||| | || ||| ||||||| | |||||| ||| | || |||| | | || ||||| || Sbjct 724 ATCCAAAGCTTGAACTTCTTCTATTTCTGGGTAAAAAATCCGTTCACAAATGAGCTGTGC 783 Query 33999 TATTCTATCCCCCGTATTTACATTGAATGTACATTTTCCATTATTAATAAGAATGACTCC 34058 |||| ||||| | || || | || | ||| ||| |||| || | || || Sbjct 784 AATTCGATCCCTTTTTTTGACTTCAAACTTTTCTTTGCCAAAATTATACAGCACAACACC 843 Query 34059 TATATTTCCCCTATAATCTTCGTCTATTACACCGCCTCCTATATCAATA---CCTTTTAG 34115 | |||||| ||||||||||| ||||| ||||| |||||| ||||||| |||| Sbjct 844 AACATTTCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTGC 903 Query 34116 GGACAGACCAGACCTAGGAGCTATTCTACCATAGCA 34151 | || ||||||| ||||||| ||| |||| || Sbjct 904 AGCCAAGCCAGACCGTGGAGCTACTCTTTCATAACA 939 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658150701848240