Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_003494.1
Length=111362
Score E
Sequences producing significant alignments: (Bits) Value
seq37 109 4e-19
>seq37
Length=19344684
Score = 109 bits (120), Expect = 4e-19
Identities = 315/470 (67%), Gaps = 30/470 (6%)
Strand=Plus/Minus
Query 22447 TTCATGTCTCACATACTGGCATTCTTTGCAATGGCAG--ATGGCATTGTAGGCGACAACC 22504
|| || || ||| | ||||| ||||||||| | || ||||||| ||| || |||
Sbjct 212052 TTTATATCCCACGTTCTGGCTTTCTTTGCA--GCAAGTTATGGCATAGTAAATGAAAACT 211995
Query 22505 TTGTGT-GCAATTTCGCAAAAGAACTTGACTATATTCCAGAAGCCAGAGCTTTCTATGGG 22563
| ||| || |||| || || ||| || | || |||||||| |||||||||
Sbjct 211994 TGGTGGAGCGATTTAGCCAA-GAAGTTCAG---ATCACAGAAGCCCACTGTTTCTATGGC 211939
Query 22564 TTTCAGGTGGCAATGGAAAATATACATGCTGAAATGTATACTCAGCTGATTATCACATTA 22623
|| || |||| ||| |||| |||||| ||||||| |||| || || ||| ||| |
Sbjct 211938 TTCCAAATGGCCATGAAAAACATACATTCTGAAATATATAGTCTCCTTATTGACACTTAC 211879
Query 22624 GTAGCTAAAGAG---AATCAAGCCGCATTGTT-TTCA--GCAGCTGAAGATATGCCATGT 22677
|| ||||| || || | ||| | |||| || |||| ||||| |||
Sbjct 211878 ATA---AAAGATCCCAACGAAAGGGAATTTCTCTTCAATGCTATTGAAACGATGCCTTGT 211822
Query 22678 GTTAAAGCCAAGGCACAGTGGGC--TGCACAATGGCTGAATGCCACACATAAGT---CTA 22732
|| || |||||| | ||||| ||| | || || | ||| | | | |||
Sbjct 211821 GTCAAGAAGAAGGCAGATTGGGCCTTGCTCTG-GGTTG---GGGACAAAGAGGCTACCTA 211766
Query 22733 TCGC-AACACGTCTCTTGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTT 22791
| | ||||||| | |||||||| || || |||||| || | |||||||| || |||
Sbjct 211765 TGGTGAACACGTTGCA--GCCTTTGCTGCAGTGGAAGGCATCTTCTTTTCTGGTTCTTTT 211708
Query 22792 GCGGCCATATTCTGGCTGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAG 22851
|| ||||||||||||| |||||||| || ||||| || | | ||||| || ||
Sbjct 211707 GCATCCATATTCTGGCTCAAGAAACGAGGACTGATGCCTGGCCTCACATTTTCTAATGAA 211648
Query 22852 TTGATTAGCCGTGACGAAGGTCTACACTGTGACTTTGCTTGTATGCTGTT 22901
| | | || | || || ||| |||||||||| || ||||| || ||||
Sbjct 211647 CTTACTGGCAGAGATGAGGGTTTACACTGTGATTTCGCTTGCCTGATGTT 211598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 356221938470458
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |