Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20 2011-11-17] 2,686 sequences; 2,608,588,537 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq37 367 2e-96 seq5 241 2e-58 seq111 167 3e-36 seq9 114 2e-20 seq1056 96.9 5e-15 seq22 95.1 2e-14 seq3 93.3 6e-14 >seq37 Length=19344684 Score = 367 bits (406), Expect = 2e-96 Identities = 668/966 (69%), Gaps = 25/966 (3%) Strand=Plus/Plus Query 49592 AAATATTGGCATTTAT---GTTTCTTTAAAAGTCAACATCTAGAGAAAAATGATTATCTT 49648 ||||| |||| ||| ||| |||| |||||| || | | | |||| ||| ||| Sbjct 211233 AAATAAAGGCACATATTCAGTTGATTTAGAAGTCAGCACCCAAGGTAAAAGAATTCTCTG 211292 Query 49649 CTTGA---GACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAG 49705 | || ||||| |||||||| | || || | ||| || | || || || || |||| Sbjct 211293 TTGGACTTGACATCACTCCCATCCTCTGATACTTACCTACTCTCTTCTCAAAGAAGTTAG 211352 Query 49706 TTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttt 49765 | |||||||||| ||| ||||| ||||| || ||||| ||||| || | ||| Sbjct 211353 TGTTTCCTTCCAGTGAAATATTCTCCATAAAGTCAAATGGATTCTCTACTCTGAAAACCC 211412 Query 49766 ttttAAATCCCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCA 49825 | |||| |||| ||| || | ||| || || ||||| || || ||| ||||| | Sbjct 211413 TGCTAAAACCCAGTTCCAGCATAAGTCTGTCTGCCACAAACTCAATGTATTGCTTCATTA 211472 Query 49826 TTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAA 49885 |||||||| || || || || || || | ||| ||||||| || || ||||| | Sbjct 211473 GAGTGCAATTCATCCCAATGAGCTTCACAGGCAAGGCCTCAGTAAGGAACTCCTGTTCCA 211532 Query 49886 TGGATACCGCATCTGTTA-TAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAA 49944 | || ||| ||| || | || ||| || | || || ||| || | | Sbjct 211533 TCCGAACAGCA-CTGATAATTATTTCTCTTACTCTCTCCTCTGATGGTTTGTGTACTTGG 211591 Query 49945 TGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCG 50004 ||||| ||||||| || |||||||| ||||| | |||||| ||||| | | | ||||| Sbjct 211592 TGTTTGAACATCAGGCAAGCGAAATCACAGTGTAAACCCTCATCTCTGCCAGTAAGTTCA 211651 Query 50005 TTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAAT 50064 || ||||| ||||| || ||||| || || || || || ||||| |||||||| ||||| Sbjct 211652 TTAGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAA 211711 Query 50065 GACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAA-GTCTCTCTCCATAACT 50123 || |||||||||||||| ||||| ||||| |||||||| ||| || | || ||||| | Sbjct 211712 GAACCAGAAAAGAAGATGCCTTCCACTGCAGCAAAGGCTGCAACGTGT-TCACCATAGGT 211770 Query 50124 GGCGCTGTCATGTATCCACTTTTGA-----GCCCAATCGGCCTTCTTTTTTACACAAGGC 50178 || || | ||| ||| || |||||||| |||||||| || ||||||||| Sbjct 211771 AGC-CTCT-TTGTCCCCAACCCAGAGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGC 211828 Query 50179 ATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCG 50238 |||||||| || ||||| |||||| | | |||| || |||||| | ||||| || Sbjct 211829 ATCGTTTCAATAGCATTGAAGAGAAATTCCCTTTCGTTGGGATCTTTTATGTAAGTGTCA 211888 Query 50239 ATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAA 50298 || | |||||||| ||||| ||||| ||||||| |||||||| || || || |||||| Sbjct 211889 ATAAGGAGACTATATATTTCAGAATGTATGTTTTTCATGGCCATTTGGAAGCCATAGAAA 211948 Query 50299 CATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACT 50358 || || || || ||||| |||||| | |||||| || | || |||||||| ||| Sbjct 211949 CAGTGGGCTTCTGTGATCTGAACTTCTTGGCTAAATCGCTCCACCAAGTTTTCATTTACT 212008 Query 50359 ATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGT 50418 || || | ||| |||||||| || |||| || || |||||| | | | | | ||| Sbjct 212009 ATGCCATAACTTGCTGCAAAGAAAGCCAGAACGTGGGATATAAAGTATCTCCCCTCGGGC 212068 Query 50419 GTTAGTTTATTCCAATCATTG----ATATCTTTAGATATATCTACTTCTTCCACTGTCCA 50474 | || ||||| || || | || || || | || || || | ||||| Sbjct 212069 TTCAG-GGATTCC---CAGTGCCAAACGTCCTTGGACAGGTCCACCTCCTTGGTGGTCCA 212124 Query 50475 AAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAAT 50534 || || ||||| |||| ||||| | | |||||| || | || | ||| ||||| || Sbjct 212125 GAAGGAGGCCTCCCCCTTCTTATATGTCTGCCAGATATCGGGGTACTCGATGGGGAATAT 212184 Query 50535 AACAAA 50540 ||||| Sbjct 212185 GACAAA 212190 >seq5 Length=50794693 Score = 241 bits (266), Expect = 2e-58 Identities = 657/994 (66%), Gaps = 24/994 (2%) Strand=Plus/Minus Query 79941 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTC 80000 || |||||| |||||||| ||||||||||||| | ||| ||||||||| || || Sbjct 46265805 TCATTTCATGAAGAGATCTAGAATCCAAAGAGCAAAAAA--GATCTCTGGCATGCTGTTC 46265748 Query 80001 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 80060 | |||||| ||||||| || | ||| | || | | || || |||| || || || Sbjct 46265747 TTTCTTTCCTATATTCTTCTTTAAATCAAACAATTCAAAGATGTCTAAATGTCAAGGCTC 46265688 Query 80061 CAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 80120 || ||| || || | |||| || | ||||| || || |||| | |||| ||| || Sbjct 46265687 CAGGTAAATAGCAAATGCTCCAGGACCCTTGTTCCCACCTCGATCCAGATATCAAGCTGT 46265628 Query 80121 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGAT 80180 ||| ||||| ||||||| ||| | || |||||||| | || || | ||| || Sbjct 46265627 GTTGTTATATACTCTCAGCATCAGTGCAAGGCCATTGGAATTGCCCTTAGACCCATCAAT 46265568 Query 80181 ATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGA 80240 ||||| ||| | || | |||| ||| | | | ||| ||||| || || |||||| Sbjct 46265567 GTAGCTGCCAGTAGCCCAAATACAACTCAAAGCAACACCAATTCCTCCAGCAGATTTAGA 46265508 Query 80241 GATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTT 80300 || || || ||| | |||| || ||||| ||||| || ||||| || || ||||| | Sbjct 46265507 AATCAACGCACATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCGTCTTTCATGCT 46265448 Query 80301 AAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGA 80360 || |||||||||||||| | ||| | | | || || ||| | || || || || || Sbjct 46265447 CAGAAGAAAACAGCTAGAAAGTTGTGGGTGGTTGGTACCAGCACTGAAGAAAGTTGGTGA 46265388 Query 80361 AGCGTGCGTAAACCATTTTTCAGACAGTAGATTGT---ACGTCTCAATAGCTGATTCTAT 80417 ||| || |||||||| | |||| || ||| ||| || ||||| ||| || || Sbjct 46265387 AGCATGAGTAAACCACCTCTCAGGAAGAAGACTGTCTGCTGTTTCAATTGCTACATCAAT 46265328 Query 80418 ATC-CCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGA 80476 ||| | ||| || || || || | || | ||| ||||| | ||| ||| ||||| | | Sbjct 46265327 ATCTTCTTTGTTG-ATCCCAACAGATACTCTCATCAACATATACTGTGGTATTTCAGCCA 46265269 Query 80477 TCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGT 80536 || ||| || |||||||| ||||| | | | ||||||||||| || |||| Sbjct 46265268 CTTTTCCATTGATCTTCAACAAATAAGACAACTGTAGCATCTTAAAACCAAAGTAATTGT 46265209 Query 80537 ATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTA 80596 | || || ||| | | |||||| | || || | | ||| |||| ||| | Sbjct 46265208 AAGAGAAATCTTAGCCACAGATAATAGCAGAATTCAAGTGATCTTTATTGGCCAAAACAA 46265149 Query 80597 CATCCA-TGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATA 80654 ||||| || || |||| | | || ||||| |||| ||| | ||| | || | Sbjct 46265148 TATCCAGTGCTG--ACTTGGCCACCATGGGAGAGCGTTTGTCATGATGTGGACTTACGCA 46265091 Query 80655 GTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGA 80714 ||| | | || |||||||| ||||| || | || |||||||| ||||| | || || Sbjct 46265090 GTTATAGAGGTCTTCCATCACATCACTGAACACTTCATTTGTTTCTTTGTGCAAGTTAGA 46265031 Query 80715 TACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGC 80774 || || | || || || | || ||||| | || || | ||||| ||| |||||| Sbjct 46265030 GACAGCAGTCCTAGCTGCCAGGATAGCATAGACAGGGTGCTTAGTAGT-CAA--GGCTGC 46264974 Query 80775 TATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGGAT 80834 | | | | | || | ||| | | | || || ||| | || | | |||||| Sbjct 46264973 --------CGCCAAAAATATCTAGTTCCATCATAGTGACCCCACTGTACAAGCATTGGAT 46264922 Query 80835 AACCTTCATAGCTATTTTAATAGGATCTATATGATCAGTGTTTAAGCCATAACATAATTT 80894 || ||||| | || | | ||||| | | ||| | | ||||||||| || | Sbjct 46264921 TACTTTCATGGTGATCTGAGCGGGATCAACAAAATCCACAATGAGGCCATAACA-AAGCT 46264863 Query 80895 TCT-AATACGAGACGTGATTTTATCAAACATGAC 80927 ||| || ||||| | ||||| ||||| ||||| Sbjct 46264862 TCTGGATTCGAGATTTAATTTTGTCAAATATGAC 46264829 >seq111 Length=7367144 Score = 167 bits (184), Expect = 3e-36 Identities = 303/436 (69%), Gaps = 12/436 (3%) Strand=Plus/Plus Query 49980 ACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTT 50039 |||||| || || ||||| ||||| |||||||| ||||| || | ||| || | | || Sbjct 4918146 ACCCTCATCACTGCTAATAAGTTCATTGGAAAATGTGAGGCCAGACATCAGTCATTGTTT 4918205 Query 50040 TTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAA 50099 || ||||| ||||| || ||||| || |||||| ||||| | |||||||||| |||||| Sbjct 4918206 CTTGAGCCAGAATATTGATGCAAAAGAACCAGAAGAGAAGGTGCCTTCTACTGTGGCAAA 4918265 Query 50100 GGC---AACAAGT-CTCTCTCCATAACTGGCGCTGTCATGTATCCACTTTTGAGCCCAAT 50155 ||| |||| || |||| | || | | ||| ||||| ||||||| Sbjct 4918266 GGCTGCAACACGTTCTCTGTGGGTAGCAT-CTTTGTTCACAATCCAACACAAGGCCCAAT 4918324 Query 50156 CGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCAT 50215 | |||| ||| || |||||||||||| |||| ||||| || |||||| | | |||| | Sbjct 4918325 CTGCCTCCTTCTTGACACAAGGCATCCTTTCGATGGCGTTGAAGAGAAATTCCCTTTCTT 4918384 Query 50216 TACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAA 50275 | | |||||||||| || || | || ||| ||| ||| || |||| |||||||| | Sbjct 4918385 TGTTGTCTTTAACAT--GTGTCAGTAAAGAGATTATCCATGTCAGAATATATGTTTTCCA 4918442 Query 50276 TGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTC-TGTACAAAAT 50334 | || || || || || ||||| || | || ||| || ||||| || || | || Sbjct 4918443 TAGCAATTTGGAAGCCATAGAAGCA---GGTTTCTGTAGCTTGAACTTCTTGGAC-ACAT 4918498 Query 50335 CGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGT 50394 | || | || |||| || ||||| || | |||||||| || | || | ||| Sbjct 4918499 TGCTCCACCAAGTTTTTATCAACTATGCCACGGCATGCTGCAAAGAAAGTCAGAATATGG 4918558 Query 50395 TTTATAAAATGTTTTT 50410 |||||||| | ||| Sbjct 4918559 GATATAAAATATCTTT 4918574 >seq9 Length=44311105 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 78785 TCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGATCTGCTATATGGATAT 78844 |||| |||||||| |||||||| || |||||| ||| | || || || || ||||| | Sbjct 1875011 TCCAGCCGTAGAAGTGCATACTTGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 1875070 Query 78845 TCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 78904 ||| ||| || |||||||| ||||| || || || || |||||||| || | | || | Sbjct 1875071 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 1875130 Query 78905 TTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 78955 | || | |||||||| | ||||||||||| | |||| | || || |||| Sbjct 1875131 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 1875181 Score = 107 bits (118), Expect = 3e-18 Identities = 104/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998 ||||||||||| |||||||| |||||||||||||| | ||| |||||||||| | || Sbjct 1896021 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACGCTGT 1896080 Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058 || || |||||||| ||||| || | ||| ||||| | | || || ||||||| || Sbjct 1896081 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCAAGGC 1896140 Query 80059 TCCAAGTATATGGC 80072 |||| ||| || || Sbjct 1896141 TCCAGGTAAATAGC 1896154 Score = 104 bits (114), Expect = 3e-17 Identities = 105/137 (77%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119 || ||||||||||| ||||| ||||| ||||| || || || ||||| || ||||| | Sbjct 1878112 ACCTGAAATTCTCCTGACAAGACTCTGCGAGTATAGATGTTGCTGGTGTAAGGTTCAATA 1878171 Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179 || |||||||| |||| || |||||||| || || || ||||| || || | | |||| Sbjct 1878172 GACTCATTATTCCCCAGGATCTGAGCAGTGGAAGCTGTAGGCATCGGGGCAATAAGTAAA 1878231 Query 79180 CTATTTCTAAGACCGTA 79196 || ||||| | ||| || Sbjct 1878232 CTGTTTCTTATACCATA 1878248 Score = 91.5 bits (100), Expect = 2e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 79300 TATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAA 79359 || |||||||| ||||| | || | ||| | ||||| || || || | ||||||||| Sbjct 1883224 TAGGTTTCATATGGTCCATGCTCCTTGGCAAGGTCACAGCTGGCTTCCAGGGCTCCGTAA 1883283 Query 79360 TAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAA 79419 ||||| ||||| || |||| |||||| | || |||||| || ||||| || || Sbjct 1883284 TAAATAGTTTCAAAGATCTGCTTATTCAATAACTGGGCTTCTGCACTCTCAAAAGGGTAT 1883343 Query 79420 TTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTC 79479 | | || ||||| || ||||| | ||||| || ||||| || || || | ||| | Sbjct 1883344 CTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGGCGATGACGT 1883403 Query 79480 TTATTAGA 79487 ||||| || Sbjct 1883404 TTATTTGA 1883411 >seq1056 Length=1934 Score = 96.9 bits (106), Expect = 5e-15 Identities = 174/254 (69%), Gaps = 3/254 (1%) Strand=Plus/Plus Query 47704 CCAGTTGATCCAAACCCTTGAGCTCCTCTATCTGTACTATCTAGAGATTGTACTTCCTCC 47763 ||||| || ||||| ||| | || || || || ||| | || ||| ||||| || Sbjct 686 CCAGTGGAACCAAAACCTCCTGAACCCCTTTCGGTGTCATCCAAAGCTTGAACTTCTTCT 745 Query 47764 AGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCCGTATTTACA 47823 | |||||| ||| | || |||| | | || ||||| || |||| ||| | | || || Sbjct 746 ATTTCTGGGTAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGATCCCTTTTTTTGACT 805 Query 47824 TTGAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCTTCG 47883 | ||| | ||| ||| |||| || | || || | ||||| ||||||||||| Sbjct 806 TCAAACTTTTCTTTGCCAAAATTATACAGCACAACACCAACATTTCCTCTATAATCTTCA 865 Query 47884 TCTATTACACCACCTCCTATATCAAT---GCCTTTTAGTGACAGTCCAGACCTAGGAGCT 47940 ||||| |||||| |||||| |||||| | |||| | || ||||||| |||||| Sbjct 866 TCTATGACACCAGCTCCTACATCAATAAAGTGTTTTGCAGCCAAGCCAGACCGTGGAGCT 925 Query 47941 ATTCTACCATAGCA 47954 | ||| |||| || Sbjct 926 ACTCTTTCATAACA 939 >seq22 Length=27210278 Score = 95.1 bits (104), Expect = 2e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 50220 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 50279 |||||| | ||||| || || | |||||||||||||| ||||| |||||||| ||||| Sbjct 23199818 ATCTTTTATGTAAGTGTCAATAAGGAGACTATACATTTCAGAATGTATGTTTTCCATGGC 23199877 Query 50280 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTC 50339 || || || || |||||||| | || || |||||||| |||||| | |||||| || Sbjct 23199878 AATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAACTTCTTGGCTAAATCGCTC 23199937 >seq3 Length=58292249 Score = 93.3 bits (102), Expect = 6e-14 Identities = 147/210 (70%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 47748 AGATTGTACTTCCTCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCT 47807 || ||| ||||| || | |||||| ||| | || |||| | | || || || || |||| Sbjct 29419078 AGCTTGAACTTCTTCTATTTCTGGGTAAAAAATCCGTTCACAAATGAGTTGTGCAATTCG 29419137 Query 47808 ATCTCCCGTATTTACATTGAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTT 47867 ||| | | || || | ||| | ||| ||| ||||| || || || | ||| Sbjct 29419138 ATCATCTTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTGCAACACCAACGTT 29419197 Query 47868 TCCCCTATAATCTTCGTCTATTACACCACCTCCTATATCAAT---GCCTTTTAGTGACAG 47924 ||| ||||||||||| ||||| |||||| |||||| |||||| | |||| | || Sbjct 29419198 TCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTTCAGCCAA 29419257 Query 47925 TCCAGACCTAGGAGCTATTCTACCATAGCA 47954 ||||||| |||||||| ||| || || || Sbjct 29419258 GCCAGACCGAGGAGCTACTCTTCCGTAACA 29419287 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718244684125040