Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq22 87.8 3e-12
>seq22
Length=27210278
Score = 87.8 bits (96), Expect = 3e-12
Identities = 194/291 (67%), Gaps = 0/291 (0%)
Strand=Plus/Minus
Query 70334 GACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGCACATGATT 70393
||| ||||||| ||| | || || ||||| | ||||| | || | ||| |||||||
Sbjct 26912739 GACGTGGGCCTAGGTATGCCTTTCAACATCACCAGCTACGCCCTGCTCACGTACATGATC 26912680
Query 70394 GCTCACATTACCGGCCTGAAAGCGCACGAGTTCGTACACACCATTGGCGACGCTCACGTG 70453
||||| || |||||||| | || || ||||| | | || || || || |
Sbjct 26912679 ATGCACATCACGGGCCTGAAGCCAGGTGATTTTGTACATGCTTTGGGAGATGCACATATT 26912620
Query 70454 TATTTAAATCACATCGAGCCATTAAAGGTGCAACTCGAACGGGAGCCGAGACCTTTTCCC 70513
|| | ||||||||||||||| | || | || || | | || | |||||||| ||
Sbjct 26912619 TACCTGAATCACATCGAGCCACTGAAAATTCAGCTTCAGTGAGAACGCAGACCTTTCCCA 26912560
Query 70514 AAGCTGGAGTTTGCTCGTAAAGTTGAAAATATTGACAGTTTTAAGTACGAAGATTTTATA 70573
||||| || || ||| |||||||| || ||||| || || ||||| ||||
Sbjct 26912559 AAGCTCAAGATTCTTCGAAAAGTTGAGAAAATTGATGACTTCAAAGCTGAAGACTTTAAG 26912500
Query 70574 ATAAAAGGTTACGATCCATACCCTAAGATTCCCATGGTTCTGGCTGTTTAG 70624
| |||| ||| ||| |||| | ||| |||| |||||||||||
Sbjct 26912499 GTTGAAGGGTACAATCTGCACCCAACTATTAAAATGGAAATGGCTGTTTAG 26912449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741034318937360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |