Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20 2011-11-17] 2,686 sequences; 2,608,588,537 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq101 87.8 2e-12 seq8 84.2 2e-11 >seq101 Length=8127303 Score = 87.8 bits (96), Expect = 2e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921 || |||||||| || ||||| ||||| |||||||| || | | ||||| ||||| ||| Sbjct 4242013 GATAAAGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAA 4241954 Query 26922 GATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 ||| | | | | ||||||||||||||||| || |||||| | ||||| || || Sbjct 4241953 GATTGTTGTACTTTGTCTGACTATAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTG 4241894 Query 26982 AGACTT 26987 |||||| Sbjct 4241893 AGACTT 4241888 >seq8 Length=45331107 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 26862 GACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAA 26921 || || ||||| || ||||| ||||| |||||| | || || | ||||| ||||| ||| Sbjct 31945533 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGATTGATCTATGCTGGCAAGCAACTAGAA 31945592 Query 26922 GATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 |||| | | | ||||| ||||||||||| || |||||| | |||||||| || Sbjct 31945593 GATGGACGTACTCTGTCTGACTACAACATTCAAAAGGAGTCTACTCTTCATCTGGTGTTG 31945652 Query 26982 AGACTT 26987 |||||| Sbjct 31945653 AGACTT 31945658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478646328909920