Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq54 105 6e-18
seq134 104 2e-17
seq38 102 7e-17
seq116 98.7 8e-16
seq8 96.9 3e-15
seq101 91.5 1e-13
seq52 91.5 1e-13
seq14 87.8 2e-12
>seq54
Length=16265076
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 115284 AAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCA 115343
||| ||| |||||||| ||||| || || || || ||||| ||| |||| | || ||
Sbjct 5607227 AAAAGCAGATTTTTGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGCTGAACCCT 5607168
Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403
|| ||| | | | ||||| || ||| ||||| |||||| | || |||||
Sbjct 5607167 CGGATACTACAGAAAATGTAAAGGCCAAGATTCAGGATAAGGAAGGCATTCCTCCTGATC 5607108
Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463
|||||||||| || | ||| ||||| ||| | ||||||| | || | || || |
Sbjct 5607107 AGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTATTTTGTCTGACTACA 5607048
Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGA 115501
||||||| || ||||||||| | ||| | |||||||||
Sbjct 5607047 ACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGA 5607010
>seq134
Length=5851302
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||| ||||| || ||||| || ||||| || ||||| ||| |||| || ||
Sbjct 3733157 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 3733216
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|| || | | | | ||||| || || ||||| ||||| | || ||||
Sbjct 3733217 TCAGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 3733276
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
||||||||||| || | ||| ||||| ||| | ||||||| || || | || ||
Sbjct 3733277 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 3733336
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|||||||| || ||||||||| | ||| | ||||||||| | || || ||
Sbjct 3733337 AACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGACTTCGTGGTGG 3733386
>seq38
Length=19171412
Score = 102 bits (112), Expect = 7e-17
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||| ||||| || ||||| || ||||| || ||||| ||| |||| || ||
Sbjct 14820745 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 14820686
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|| || | | | | ||||| || || ||||| ||||| | || ||||
Sbjct 14820685 TCAGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 14820626
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
||||||||||| || | ||| ||||| ||| | ||||||| || || | || ||
Sbjct 14820625 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 14820566
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGA 115501
|||||||| || ||||||||| | ||| | |||||||||
Sbjct 14820565 AACATTCAGAAGGAGTCTACTCTTCATCTTGTGTTGAGA 14820527
>seq116
Length=6990774
Score = 98.7 bits (108), Expect = 8e-16
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||| |||||||| ||||| || | ||| || ||||| ||| || | | || |
Sbjct 541502 AAAATGCAGATTTTTGTGAAAACCCTTATGGGGAAGACCATCACCCTCAAGGCTGAACCT 541561
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|| || | | | | ||||| || || ||||| ||||| | || ||||
Sbjct 541562 TCGGATACAATAGAAAACGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 541621
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
||||||||||| || | ||| ||||| ||| | ||||||| || || | || ||
Sbjct 541622 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTAC 541681
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGA 115501
||||||||||| ||||||| | | ||| | |||||||||
Sbjct 541682 AACATTCAAAAGGAGTCTATTTTTCATCTTGTGTTGAGA 541720
>seq8
Length=45331107
Score = 96.9 bits (106), Expect = 3e-15
Identities = 95/123 (77%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438
||||| ||||| | || ||||||||||||| | || ||||| ||||| ||| |||||
Sbjct 31945533 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGATTGATCTATGCTGGCAAGCAACTAGAA 31945592
Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498
|||| || || | || || ||||||||||| ||||||||| | ||| ||||||||
Sbjct 31945593 GATGGACGTACTCTGTCTGACTACAACATTCAAAAGGAGTCTACTCTTCATCTGGTGTTG 31945652
Query 115499 AGA 115501
|||
Sbjct 31945653 AGA 31945655
>seq101
Length=8127303
Score = 91.5 bits (100), Expect = 1e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 115379 GATAAAGAAGGCGTCCCCGTTGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAA 115438
||||||||||| | || ||||||||||||||| || | ||| ||||| ||| | |||
Sbjct 4242013 GATAAAGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAA 4241954
Query 115439 GATGACAAAACCATGGCCGATTATAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498
||| || || | || |||||||||||||| ||||||||| | ||| | ||||||
Sbjct 4241953 GATTGTTGTACTTTGTCTGACTATAACATTCAAAAGGAGTCTACTCTTCATCTTGTGTTG 4241894
Query 115499 AGA 115501
|||
Sbjct 4241893 AGA 4241891
>seq52
Length=16356641
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||| ||||| || ||||| || ||||| || ||||| ||| |||| || ||
Sbjct 10618873 AAAATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAGGTTGAACCC 10618932
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|| || | | | | ||||| || || ||||| ||||| | || |||
Sbjct 10618933 TCGGATACGATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAG 10618992
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
||||||||||| || | ||| ||||| ||| | ||||||| || || | || ||
Sbjct 10618993 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 10619052
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTT 115497
|||||||| || ||||||||| | ||| | |||||
Sbjct 10619053 AACATTCAGAAGGAGTCTACTCTTCATCTTGTGTT 10619087
>seq14
Length=37227512
Score = 87.8 bits (96), Expect = 2e-12
Identities = 153/220 (70%), Gaps = 6/220 (3%)
Strand=Plus/Minus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|||||||| |||||||| ||||| |||| ||| || | ||| ||| | || || ||
Sbjct 27608000 AAAATGCAGATTTTTGTGAAAACCCTCATGGGGAAGATCATCACCCTTGAGGTTGAACCC 27607941
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|||||| | | | ||||| || || ||||| ||||| | || ||||
Sbjct 27607940 TCCGACACGACAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 27607881
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGAT-GACAAAACCATGGCCGATTA 115461
||| ||||||| || | ||| ||||| ||| | |||||| |||| | | | | | ||
Sbjct 27607880 CAGGAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATAGACATA--CTTTGAC---TA 27607826
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGA 115501
||||||||||| ||||||| | | ||| | |||| ||||
Sbjct 27607825 CAACATTCAAAAGGAGTCTAGTCTTCATCTTGTGTCGAGA 27607786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425330076098320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |