Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq12 96.9 3e-15
seq22 87.8 2e-12
>seq12
Length=39782659
Score = 96.9 bits (106), Expect = 3e-15
Identities = 112/151 (74%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 20249 TGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCC 20308
|| || | ||| || || | |||| |||||||| ||||| ||||| || || | |||
Sbjct 25689294 TGCGCGATCATGTACGTGAGCAGGGCGTAGCTGGCGATGTTGAAAGGCACACCTAGGCCC 25689235
Query 20309 ATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGA 20368
|||||||| || |||||||||||||| ||||| |||||||||| | || || || ||
Sbjct 25689234 ATGTCTCCTGATCTCTGATACAGCTGGCAGGACAGCTCACCGTTCACCACGTAGAACTGG 25689175
Query 20369 CATAACAAGTGACAGGGCGGAAGCGCCATCA 20399
|| | || || || || ||||||||||
Sbjct 25689174 CAGAGGGCATGGCATGGAGGCAGCGCCATCA 25689144
>seq22
Length=27210278
Score = 87.8 bits (96), Expect = 2e-12
Identities = 159/231 (69%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 20171 AGTGGCTCTATATGCGTTTTGTAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCG 20230
|||||||| || || | ||| || || ||||||||||| | || | ||| || ||
Sbjct 26912597 AGTGGCTCGATGTGATTCAGGTAAATATGTGCATCTCCCAAAGCATGTACAAAATCACCT 26912656
Query 20231 GGTCTAAGACCAGTAACATGAGCA--AGCATATAAGTTAAGAGGGAATAGCTGGCAATGT 20288
|| | || || || ||| ||| | ||| || || | |||| ||||||| ||||
Sbjct 26912657 GGCTTCAGGCCCGT--GATGTGCATGATCATGTACGTGAGCAGGGCGTAGCTGGTGATGT 26912714
Query 20289 TAAAAGGAACTCCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCAC 20348
| ||||| | || | |||| ||||| || ||||| |||||||||||||| |||||||
Sbjct 26912715 TGAAAGGCATACCTAGGCCCACGTCTCTTGATCTCTGGTACAGCTGACAGGACAGCTCAC 26912774
Query 20349 CGTCAGCTACATAAAATTGACATAACAAGTGACAGGGCGGAAGCGCCATCA 20399
|| | || || || || || | || || || || | ||||||||
Sbjct 26912775 TGTTCACCACGTAGAACTGGCAGAGGGCATGGCATGGGGGCAACGCCATCA 26912825
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441357980908240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |