Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_009503.1
Length=124121
Score E
Sequences producing significant alignments: (Bits) Value
seq9 87.8 1e-12
>seq9
Length=44311105
Score = 87.8 bits (96), Expect = 1e-12
Identities = 161/231 (70%), Gaps = 10/231 (4%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| |||| ||| ||||||||||| || || ||| ||||||||| |||||||| ||||
Sbjct 14505871 CCACCTCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTG-- 14505814
Query 33961 AATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019
| || || | || |||| || ||||||||||||||||| | |||||| || | ||
Sbjct 14505813 -AGCGTGCGGCCATCCTCCAGCTGTTTGCCGGCAAATATCAGACACTGCTGGTCAAGTGG 14505755
Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACA---CTATCAGTAGATTC 34076
| | || |||| | | | |||| |||| || | || || | ||| | | ||
Sbjct 14505754 GATACCTTCCTTGT-CTTGAATTTTGGCTT--TGACATTCTCAGTGGTGTCACTGGGCTC 14505698
Query 34077 GCATTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT 34127
| || | || || || || || || || || ||||||||||| |||||
Sbjct 14505697 GACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 14505647
Score = 82.4 bits (90), Expect = 6e-11
Identities = 88/114 (77%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960
|| |||| ||| |||||||| || || || ||| ||| |||||||||||||| ||||
Sbjct 3708446 CCACCTCACAGGCGCAGCACTAGGTGCAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAG 3708387
Query 33961 AAT-TGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013
| | || ||| | || |||| || || |||||||||||||| | |||||| ||
Sbjct 3708386 AGTGTGCCGC-CATCCTCCAGCTGTTTACCGGCAAATATCAGACACTGCTGGTC 3708334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397049401914172
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |