Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq134 129 1e-24
seq33 127 5e-24
seq38 123 6e-23
seq71 122 2e-22
seq27 122 2e-22
seq52 116 9e-21
seq85 114 3e-20
seq8 111 4e-19
seq79 109 1e-18
seq102 105 2e-17
seq11 105 2e-17
seq116 104 6e-17
seq6 102 2e-16
seq49 100 7e-16
seq218 98.7 2e-15
seq77 98.7 2e-15
seq101 96.9 8e-15
seq9 95.1 3e-14
seq63 91.5 3e-13
seq59 91.5 3e-13
seq48 91.5 3e-13
seq29 87.8 4e-12
seq67 86.0 1e-11
seq55 84.2 5e-11
seq21 84.2 5e-11
>seq134
Length=5851302
Score = 129 bits (142), Expect = 1e-24
Identities = 167/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || ||||| | || ||||||| || || || || || || ||||| |
Sbjct 3733386 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 3733327
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || ||||| ||||| | ||| || || || |||||||| | || ||| | ||
Sbjct 3733326 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 3733267
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| ||||||||||| || || || || |||||||| | ||| | ||| ||
Sbjct 3733266 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCTGAGGGTTCAACC 3733207
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
||||| ||||| |||||||| || || || || ||||| ||||||||| ||
Sbjct 3733206 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 3733156
>seq33
Length=21137282
Score = 127 bits (140), Expect = 5e-24
Identities = 145/195 (74%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || ||||| | || ||| | || ||||| | || || ||||| |||
Sbjct 15373720 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAAG 15373661
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || ||||| ||||| ||||||||||| || || ||||| |||
Sbjct 15373660 ATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTT 15373601
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || || || |||||||| ||||| |||||||| ||||| |||
Sbjct 15373600 TCGATGGTGTCACTGGGCTCCACCTCCAGCGTGATGGTCTTGCCGGTCAGGGTCTTCACG 15373541
Query 288463 AATATCTGCATTATG 288477
|| ||||||||| ||
Sbjct 15373540 AAGATCTGCATTTTG 15373526
Score = 100 bits (110), Expect = 7e-16
Identities = 88/110 (80%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| ||||| ||||||||||| || || ||||||||||| || | || || | ||
Sbjct 15373867 GGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCC 15373808
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || ||||| ||||| |||||||| ||||| ||||| ||||||||
Sbjct 15373807 ACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 15373758
>seq38
Length=19171412
Score = 123 bits (136), Expect = 6e-23
Identities = 166/231 (72%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||||| | || ||||||| || || || || || || ||||| |
Sbjct 14820516 CCACCACAAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 14820575
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || ||||| ||||| | ||| || || || |||||||| | || ||| | ||
Sbjct 14820576 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 14820635
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| ||||||||||| || || || || |||||||| | ||| | ||| ||
Sbjct 14820636 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCTGAGGGTTCAACC 14820695
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
||||| ||||| |||||||| || || || || ||||| ||||||||| ||
Sbjct 14820696 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 14820746
>seq71
Length=11673789
Score = 122 bits (134), Expect = 2e-22
Identities = 144/195 (74%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || ||||| | || ||||| || ||||| | || || ||||| |||
Sbjct 72263 TCTTTCTGGATGTTGTAGTCAGGAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 72204
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
|| || | ||| || | ||||| ||||| ||||||||||| || || || || |||
Sbjct 72203 ATGAGCCTCTGCTGGTCGTGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTT 72144
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || || || || ||||| ||||| |||||||| ||||| ||
Sbjct 72143 TCGATGGTGTCACTAGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACA 72084
Query 288463 AATATCTGCATTATG 288477
|| ||||||||| ||
Sbjct 72083 AAGATCTGCATTTTG 72069
>seq27
Length=24139186
Score = 122 bits (134), Expect = 2e-22
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| |||||||| ||||| | || ||||| |||||||| | ||||| || || |||
Sbjct 5858110 TCTTTCTGGATATTGTAGTCAGAAAGGGTGCGCCCGTCTTCCAGCTGTTTCCCAGCAAAG 5858051
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||| | ||| || | ||||| |||||||| |||||||| || || || | ||||
Sbjct 5858050 ATCGATCTCTGCTGCTCAGGAGGGATGCCTTCTTTGTCCTGGATCTTTGCCTTGATGTTT 5857991
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| ||| || || | | || ||||| ||||| ||||| || ||||||||||| | |
Sbjct 5857990 TCAATAATGTCACTGGGCTGGACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTCATG 5857931
Query 288463 AATATCTGCATT 288474
|| |||||| ||
Sbjct 5857930 AAGATCTGCCTT 5857919
>seq52
Length=16356641
Score = 116 bits (128), Expect = 9e-21
Identities = 156/216 (72%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324
|| ||||||| || || || || || || ||||| | | || ||||| |||||
Sbjct 10619084 ACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCC 10619025
Query 288325 AATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381
| ||| || || || |||||||| | |||| | || | || |||||||| ||||||
Sbjct 10619024 AGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGCTCAGGA---GGAATTCCTTCCTTATCC 10618968
Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441
||||| || || || || |||||||| | ||| | ||| || ||||| ||||| |||
Sbjct 10618967 TGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGTC 10618908
Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
||||| || || || || ||||| ||||||||| ||
Sbjct 10618907 TTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 10618872
>seq85
Length=9676098
Score = 114 bits (126), Expect = 3e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||||| | || ||||||| || || ||||| || || ||||| |
Sbjct 5982655 CCACCATGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 5982596
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || |||| |||||| | || || || || |||||| | | || ||| | ||
Sbjct 5982595 AAAGTACGTCTGTCTTCCAGTTACTTGCCAGCAAAGATCCGTCTTTGCTGATCAGGAGGA 5982536
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| ||||||||||| || || || || |||||| | | ||| | ||| ||
Sbjct 5982535 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTCGTATCCGAGGGTTCAACC 5982476
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
||||| ||||| |||||||| || || || || ||||| ||||||||| ||
Sbjct 5982475 TCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTTG 5982425
>seq8
Length=45331107
Score = 111 bits (122), Expect = 4e-19
Identities = 163/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||||| | || ||||||| || || ||||| || || ||||| |
Sbjct 31945666 CCACCATGAAGTCTCAACACCAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 31945607
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || ||||| ||||||| ||| || || || |||||| | || ||| | ||
Sbjct 31945606 AGAGTACGTCCATCTTCTAGTTGCTTGCCAGCATAGATCAATCTTTGCTGATCAGGAGGA 31945547
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| ||||||||||| || || || ||||||||| | | ||| | ||| ||
Sbjct 31945546 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACGTTTTCTTTCGTATCTGAGGGTTCAACC 31945487
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
| ||| ||||| |||||| | || ||||| | ||| ||||||||| ||
Sbjct 31945486 TGGAGGGTGATAGTCTTCTCCGTAAGAGTTTGTGTGAAAATCTGCATTTTG 31945436
>seq79
Length=10412959
Score = 109 bits (120), Expect = 1e-18
Identities = 145/202 (72%), Gaps = 7/202 (3%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || ||||| | || ||||| || ||||| | || || ||||| |||
Sbjct 108397 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 108338
Query 288343 ATCAGACGCTGTTGA-------GAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTT 288395
|| || | ||| ||| || || || ||||| ||||||||||| || || ||
Sbjct 108337 ATGAGCCTCTGCTGATCGGGGAGAGGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCTT 108278
Query 288396 CACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGT 288455
||| ||||| || | || || | || ||||| || ||||| ||||| ||||||| ||
Sbjct 108277 CACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCATGGT 108218
Query 288456 CTTGACGAATATCTGCATTATG 288477
||| | || ||||||||| ||
Sbjct 108217 CTTCGCAAAGATCTGCATTTTG 108196
>seq102
Length=8035806
Score = 105 bits (116), Expect = 2e-17
Identities = 163/231 (71%), Gaps = 5/231 (2%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || |||| | || || |||| ||| || ||||| || | |||||
Sbjct 241677 CCACCCCGAGGTCTCAACACCAGGTGAAGCGTAGACTCCTTTTGAATGCTGTAGTC---- 241732
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || ||||| ||||| ||| || || || |||||||| | ||||||| | ||
Sbjct 241733 AAAGTACGTCCATCTTCCGGTTGCTTGCCAGCAAAGATCAGCCTCTGTTGATCAAGAGGA 241792
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| ||||||||||| | || || || |||||||| ||| | ||| ||
Sbjct 241793 ATTCCTTCCTTATCCTGGATCGTGGCCTTTACATTTTCTATCTCATCCGAGGGTTCGACC 241852
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
||||| ||||| |||||||| | || || || ||||| ||||||||| ||
Sbjct 241853 TCGAG-GTGATGGTCTTCCCCCTAAGGGTTTTCACGAAAATCTGCATTGTG 241902
>seq11
Length=43820709
Score = 105 bits (116), Expect = 2e-17
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || | ||| | ||||||||| || || || | ||||| || || ||
Sbjct 25320767 TCTTTCTGGATGTTGTTGTCTGAGAGCGTGCGGCCATCCTCCAGCTGTTTGCCGGCAAAT 25320826
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||||||||| || | |||||| || | || || || ||||| ||||| || ||
Sbjct 25320827 ATCAGACGCTGCTGGTCAGGTGGGATACCCTTCTTGTCTTGAATTTTGGCTTTGACATTC 25320886
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || || || || ||||| ||||| || || || ||||| ||
Sbjct 25320887 TCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACA 25320946
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 25320947 AAGATCTGCAT 25320957
>seq116
Length=6990774
Score = 104 bits (114), Expect = 6e-17
Identities = 140/195 (72%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| ||||| || || ||||| | | || | ||| ||||| | ||| || || || |||
Sbjct 541695 TCCTTTTGAATGTTGTAGTCAGACAAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAG 541636
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | || ||| | || |||||||| ||||||||||| || || || ||||||
Sbjct 541635 ATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACGTTT 541576
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
||||| | ||| | ||| | | ||| ||||| |||||||| | || || || ||
Sbjct 541575 TCTATTGTATCCGAAGGTTCAGCCTTGAGGGTGATGGTCTTCCCCATAAGGGTTTTCACA 541516
Query 288463 AATATCTGCATTATG 288477
|| ||||||||| ||
Sbjct 541515 AAAATCTGCATTTTG 541501
>seq6
Length=49021937
Score = 102 bits (112), Expect = 2e-16
Identities = 153/216 (71%), Gaps = 6/216 (3%)
Strand=Plus/Minus
Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320
|||||| ||||| | || ||||| ||||| || ||||| | || |||| || ||
Sbjct 37593747 AAGTACTAGATGTAGAATGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCACCCATC 37593688
Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCTGGGATTCCTTCTTT 288377
||| | || ||||| || ||||||| | |||| | || | |||| ||||| |
Sbjct 37593687 TTCCAGCTGCTTTCCGGCAAAGATCAACCTCCGCTGGTCAGGAA---GGATGCCTTCCTG 37593631
Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437
|||||||| || || || ||||| || || | || || | || || || || |||||
Sbjct 37593630 GTCCTGGATCTTTGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGAT 37593571
Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| || ||||| ||||| || |||||||||||
Sbjct 37593570 GGTCTTACCAGTCAGGGTCTTCACTAATATCTGCAT 37593535
>seq49
Length=16587080
Score = 100 bits (110), Expect = 7e-16
Identities = 123/168 (73%), Gaps = 0/168 (0%)
Strand=Plus/Plus
Query 288310 GTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATT 288369
|||| ||| ||||| | ||| ||||| || |||||||| | || ||| | || |||
Sbjct 2336160 GTGCATCCATCTTCCAGTTGCTTTCCAGCCAAGATCAGTCTTTGATGATCAGGAGGAATT 2336219
Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429
|| || |||||||| || || || || || ||||||| ||| | || ||||||
Sbjct 2336220 CCATCCTTATCCTGCATCTTAGCCTTTACAGTTTCTATCATATCCGAGGGTTTGACTTCG 2336279
Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
|| ||||| ||||||||||| || || || ||||| ||||| ||| ||
Sbjct 2336280 AGGGTGATGGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGTATTTTG 2336327
>seq218
Length=888862
Score = 98.7 bits (108), Expect = 2e-15
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || ||||| | || ||||||| || || || || || || ||||| |
Sbjct 160565 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 160624
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || ||||| ||||| | ||| || || || ||||| | | || ||| | ||
Sbjct 160625 AAAGTACGTCCCTCTTCCAGTTGCTTGCCAGCAAAGAT--GTCTTTGCTGATCAGGAGGA 160682
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| ||||||||||| || | || || |||||||| ||| | ||| ||
Sbjct 160683 ATTCCTTCCTTATCCTGGATCTTGACCTTTACATTTTCTATCCTATCCGAGGGTTCAACC 160742
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
|| || ||||| |||||||| | || || || ||||| ||||||||| ||
Sbjct 160743 TCAAGGGTGATGGTCTTCCCCTTAAGGGTTTTCACGAAAATCTGCATTTTG 160793
Score = 96.9 bits (106), Expect = 8e-15
Identities = 163/232 (70%), Gaps = 8/232 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGT-GCTTTCTTTTTGGATATTATAGTCGGC 288305
||||| || ||||| | || ||||||| || | ||||| | | || || ||||| |
Sbjct 683674 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTTCTTCT-GAATGTTGTAGTCAGA 683732
Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365
| || | ||| ||||| | ||| || || || |||||||| | || ||| | ||
Sbjct 683733 CAAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 683792
Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|||||||| ||||||||||| || || || || |||||||| | || ||| |
Sbjct 683793 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCCA---GC---GTTCAGC 683846
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
|||| ||||| |||||||| | || || || ||||| ||||||||| ||
Sbjct 683847 CTCGAAGGTGATGGTCTTCCCCTTAAGGGTTTTCACGAAAATCTGCATTTTG 683898
>seq77
Length=10698663
Score = 98.7 bits (108), Expect = 2e-15
Identities = 122/167 (73%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || ||||| | || || || || ||||| || | ||| || |||
Sbjct 10127820 AGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 10127761
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| ||||||||||| || || ||||| ||||| || | || || | || ||
Sbjct 10127760 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 10127701
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || ||||| ||||| || ||||| ||||| ||||| ||||||||
Sbjct 10127700 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 10127654
>seq101
Length=8127303
Score = 96.9 bits (106), Expect = 8e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
|||| | | ||||| | || ||||||| || || ||||| || |||||||| |
Sbjct 4241880 CCACTGTGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTATAGTCAGAC 4241939
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || | | ||||| | ||| || || || |||||||| | || ||| | ||
Sbjct 4241940 AAAGTACAACAATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 4241999
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||||||||||||||| || || || || |||||| | ||| ||| |
Sbjct 4242000 ATTCCTTCTTTATCCTGGATCTTGGCCTTTACATTTTCTGTCATATCTGAGAGTTCATCC 4242059
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
||||| ||||| |||||||| | || || || | ||| ||||||||| ||
Sbjct 4242060 TCGAGGGTGATAGTCTTCCCCATAAGGGTTTTCATGAAAATCTGCATTTTG 4242110
>seq9
Length=44311105
Score = 95.1 bits (104), Expect = 3e-14
Identities = 136/191 (71%), Gaps = 2/191 (1%)
Strand=Plus/Minus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
||||| ||||| || || || | |||||| | || || || | ||||| | || ||
Sbjct 19097317 TCTTTCTGGATGTTGTATTCTG--AGCGTGAGGCCATCCTCCAGCTGTTTGCTGGCAAAT 19097260
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||||||||| || | |||||| || || || || || ||||| ||||| || ||
Sbjct 19097259 ATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTTTGGCTTTGACATTC 19097200
Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462
|| || | || || | || || || || ||||| ||||| || || || ||||| ||
Sbjct 19097199 TCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACA 19097140
Query 288463 AATATCTGCAT 288473
|| ||||||||
Sbjct 19097139 AAGATCTGCAT 19097129
>seq63
Length=13147851
Score = 91.5 bits (100), Expect = 3e-13
Identities = 120/164 (73%), Gaps = 2/164 (1%)
Strand=Plus/Plus
Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342
|| ||||| || || ||||| | | || ||||| ||||| | ||| || || || |||
Sbjct 9542293 TCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAG 9542352
Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402
||||| | || ||| | ||||||||||| ||||||||||| || || || || |||
Sbjct 9542353 ATCAGTCTTTGCTGATCAGGAGGGATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTT 9542412
Query 288403 TCTATAGAATC-GCTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445
||||| | ||| | | | ||| || || || ||||| ||| |||
Sbjct 9542413 TCTATCGTATCTGATAG-TTCAACCTCAAGGGTGATGGTCCTCC 9542455
>seq59
Length=14671897
Score = 91.5 bits (100), Expect = 3e-13
Identities = 154/223 (69%), Gaps = 0/223 (0%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || | ||| |||| ||| || || || || || ||||| |
Sbjct 11745124 CCACCTCGGAGACGGAGGATGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAT 11745065
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| |||| || ||||| | ||||| | || ||||||| | |||||| | |||
Sbjct 11745064 AGGTTGCGCCCATCTTCCAGCTGTTTCCTGGCAAAGATCAATCTCTGTTGGTCAGGAGGG 11745005
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| ||||| || || ||||| || || || ||||| | || | || || | || ||
Sbjct 11745004 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGACGTTCTTAATGGTGTCACTGGGCTCGACC 11744945
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCT 288469
|| || ||||| ||||| | |||||||||||| | || ||||
Sbjct 11744944 TCAAGGGTGATGGTCTTACTGGTCAGAGTCTTCAGAAAGATCT 11744902
>seq48
Length=16679805
Score = 91.5 bits (100), Expect = 3e-13
Identities = 157/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||||| | || ||||||| || || ||||| || || ||||| |
Sbjct 11416469 CCACCAGGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 11416528
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || | ||| |||| | ||| || || || |||||||| | || ||| | ||
Sbjct 11416529 AAAGTACATCCACCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCAGGAGGA 11416588
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| ||||||||||||| ||||| || ||||| | ||| | ||| ||
Sbjct 11416589 ATTCCTTCCTTATCCTGGATTTCAGCTTTTACACTTTCTGTCATATCCAGGGTTTCAACC 11416648
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474
| ||| ||||| |||||||| || || || || || || || ||| ||
Sbjct 11416649 TTGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACAAAAATGTGCTTT 11416696
>seq29
Length=23066823
Score = 87.8 bits (96), Expect = 4e-12
Identities = 158/231 (68%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || | ||| | || ||||||| || || || || || || |||||
Sbjct 6881220 CCACCACGAAATCTCAACACAAGATGAAGTGTAGACTCCTTCTGAATGTTGTAGTC---- 6881165
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
| || ||||| ||||| | ||| || || || |||||||| || ||| | ||
Sbjct 6881164 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTTTTTGCTGAACAGGAGGA 6881105
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|||||||| ||||||||||| | || || | |||||||| | | | | ||| ||
Sbjct 6881104 ATTCCTTCCTTATCCTGGATCCTGGCCTTTATATTTTCTATCGTAACCAAGGGTTCAACC 6881045
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
||||| |||| |||||||| | || || || | ||| ||||||||| ||
Sbjct 6881044 TCGAGGGTGACGGTCTTCCCCATAAGGGTTTTCATGAAAATCTGCATTTTG 6880994
>seq67
Length=12849963
Score = 86.0 bits (94), Expect = 1e-11
Identities = 161/234 (69%), Gaps = 7/234 (3%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| | ||||| || || ||||||| || || ||||| || || |||
Sbjct 7824668 CCACCACAAAGTCTCAGCACAAGATGAAGAGTAGACTCCTTTTGAATGTTGCGGTCACTC 7824727
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCT 288363
|| || |||| ||||| | ||| || || | || ||||| | |||| | ||||
Sbjct 7824728 AGAGTACGTCTATCTTCCAGTTGCTTGCCAGGAAACATCAGTCTTTGCTGATCAGAA--- 7824784
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| | |||||| ||||||||||| | || || || |||||||| ||| | |||
Sbjct 7824785 GGAACTCCTTCCTTATCCTGGATCTCGGCCTTTACATTTTCTATCATATCCAAGGGTTCA 7824844
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
|| ||||| ||||| | |||||| | ||||| || || || ||||||||| ||
Sbjct 7824845 ACCTCGAGGGTGATGGCCTTCCC-CTAAGAGTTTTTACAAAAATCTGCATTTTG 7824897
>seq55
Length=16221106
Score = 84.2 bits (92), Expect = 5e-11
Identities = 109/151 (72%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 35017 CTTCTTCCTCGGGAGTGATTTCGTTTTCGATACCGAACACTTTTCGAATCTCTTCCGGAG 35076
|||| ||||| ||| | || |||| |||| ||| | || |||||||| || ||||
Sbjct 10553964 CTTCCTCCTCTTCAGTAAAGTCATTTTTGATATTGAAGATCTTGCGAATCTCCTCAGGAG 10553905
Query 35077 TTTTTCCTTTTATTTTATCGGCAATAGCTTTGCATAGAACATCAAGCATACTCTTTATGT 35136
|||| || || || ||| ||||| || |||||| ||||||||||| || || ||||
Sbjct 10553904 TTTTCCCCTTGATCATATTGGCAACAGTCTTGCATGTAACATCAAGCAAACCTTTGATGT 10553845
Query 35137 TCAAGAAATTCGCTCCTTGAATCAATTCGAA 35167
| ||| |||| || | |||| | ||| ||
Sbjct 10553844 TTAAGTAATTTGCAGCCAGAATAAGTTCAAA 10553814
>seq21
Length=27742158
Score = 84.2 bits (92), Expect = 5e-11
Identities = 87/114 (76%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
||||| ||||| ||||||||||| || || || || ||||| || | || || | ||
Sbjct 616447 GGGATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCACTAGGCTCC 616388
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477
|| | || ||||| ||||| || ||||| ||||| ||||| ||||||||| ||
Sbjct 616387 ACCTTCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATTTTG 616334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179613802931108
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |