Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20 2011-11-17] 2,686 sequences; 2,608,588,537 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq134 129 1e-24 seq33 127 5e-24 seq38 123 6e-23 seq71 122 2e-22 seq27 122 2e-22 seq52 116 9e-21 seq85 114 3e-20 seq8 111 4e-19 seq79 109 1e-18 seq102 105 2e-17 seq11 105 2e-17 seq116 104 6e-17 seq6 102 2e-16 seq49 100 7e-16 seq218 98.7 2e-15 seq77 98.7 2e-15 seq101 96.9 8e-15 seq9 95.1 3e-14 seq63 91.5 3e-13 seq59 91.5 3e-13 seq48 91.5 3e-13 seq29 87.8 4e-12 seq67 86.0 1e-11 seq55 84.2 5e-11 seq21 84.2 5e-11 >seq134 Length=5851302 Score = 129 bits (142), Expect = 1e-24 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| || || || || || || ||||| | Sbjct 3733386 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 3733327 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | ||| || || || |||||||| | || ||| | || Sbjct 3733326 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 3733267 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||| | ||| | ||| || Sbjct 3733266 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCTGAGGGTTCAACC 3733207 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| |||||||| || || || || ||||| ||||||||| || Sbjct 3733206 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 3733156 >seq33 Length=21137282 Score = 127 bits (140), Expect = 5e-24 Identities = 145/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | || ||| | || ||||| | || || ||||| ||| Sbjct 15373720 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAAG 15373661 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || ||||| ||||| ||||||||||| || || ||||| ||| Sbjct 15373660 ATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTT 15373601 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || |||||||| ||||| |||||||| ||||| ||| Sbjct 15373600 TCGATGGTGTCACTGGGCTCCACCTCCAGCGTGATGGTCTTGCCGGTCAGGGTCTTCACG 15373541 Query 288463 AATATCTGCATTATG 288477 || ||||||||| || Sbjct 15373540 AAGATCTGCATTTTG 15373526 Score = 100 bits (110), Expect = 7e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| ||||| ||||||||||| || || ||||||||||| || | || || | || Sbjct 15373867 GGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACGTTTTCGATGGTGTCACTGGGCTCC 15373808 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || ||||| ||||| |||||||| ||||| ||||| |||||||| Sbjct 15373807 ACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCAT 15373758 >seq38 Length=19171412 Score = 123 bits (136), Expect = 6e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||||| || || || || || || ||||| | Sbjct 14820516 CCACCACAAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 14820575 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | ||| || || || |||||||| | || ||| | || Sbjct 14820576 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 14820635 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||||| | ||| | ||| || Sbjct 14820636 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCTGAGGGTTCAACC 14820695 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| |||||||| || || || || ||||| ||||||||| || Sbjct 14820696 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 14820746 >seq71 Length=11673789 Score = 122 bits (134), Expect = 2e-22 Identities = 144/195 (74%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | || ||||| || ||||| | || || ||||| ||| Sbjct 72263 TCTTTCTGGATGTTGTAGTCAGGAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 72204 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| || | ||||| ||||| ||||||||||| || || || || ||| Sbjct 72203 ATGAGCCTCTGCTGGTCGTGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTT 72144 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| |||||||| ||||| || Sbjct 72143 TCGATGGTGTCACTAGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACA 72084 Query 288463 AATATCTGCATTATG 288477 || ||||||||| || Sbjct 72083 AAGATCTGCATTTTG 72069 >seq27 Length=24139186 Score = 122 bits (134), Expect = 2e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| |||||||| ||||| | || ||||| |||||||| | ||||| || || ||| Sbjct 5858110 TCTTTCTGGATATTGTAGTCAGAAAGGGTGCGCCCGTCTTCCAGCTGTTTCCCAGCAAAG 5858051 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||| | ||| || | ||||| |||||||| |||||||| || || || | |||| Sbjct 5858050 ATCGATCTCTGCTGCTCAGGAGGGATGCCTTCTTTGTCCTGGATCTTTGCCTTGATGTTT 5857991 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || ||| || || | | || ||||| ||||| ||||| || ||||||||||| | | Sbjct 5857990 TCAATAATGTCACTGGGCTGGACCTCGAGGGTGATGGTCTTGCCAGTCAGAGTCTTCATG 5857931 Query 288463 AATATCTGCATT 288474 || |||||| || Sbjct 5857930 AAGATCTGCCTT 5857919 >seq52 Length=16356641 Score = 116 bits (128), Expect = 9e-21 Identities = 156/216 (72%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 288265 ACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCT 288324 || ||||||| || || || || || || ||||| | | || ||||| ||||| Sbjct 10619084 ACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCC 10619025 Query 288325 AATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 | ||| || || || |||||||| | |||| | || | || |||||||| |||||| Sbjct 10619024 AGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGCTCAGGA---GGAATTCCTTCCTTATCC 10618968 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 ||||| || || || || |||||||| | ||| | ||| || ||||| ||||| ||| Sbjct 10618967 TGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGTC 10618908 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| || || || || ||||| ||||||||| || Sbjct 10618907 TTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 10618872 >seq85 Length=9676098 Score = 114 bits (126), Expect = 3e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||||| || || ||||| || || ||||| | Sbjct 5982655 CCACCATGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 5982596 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || |||| |||||| | || || || || |||||| | | || ||| | || Sbjct 5982595 AAAGTACGTCTGTCTTCCAGTTACTTGCCAGCAAAGATCCGTCTTTGCTGATCAGGAGGA 5982536 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || || |||||| | | ||| | ||| || Sbjct 5982535 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTCGTATCCGAGGGTTCAACC 5982476 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| |||||||| || || || || ||||| ||||||||| || Sbjct 5982475 TCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTTG 5982425 >seq8 Length=45331107 Score = 111 bits (122), Expect = 4e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||||| || || ||||| || || ||||| | Sbjct 31945666 CCACCATGAAGTCTCAACACCAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 31945607 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || ||||| ||||||| ||| || || || |||||| | || ||| | || Sbjct 31945606 AGAGTACGTCCATCTTCTAGTTGCTTGCCAGCATAGATCAATCTTTGCTGATCAGGAGGA 31945547 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || || || ||||||||| | | ||| | ||| || Sbjct 31945546 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACGTTTTCTTTCGTATCTGAGGGTTCAACC 31945487 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 | ||| ||||| |||||| | || ||||| | ||| ||||||||| || Sbjct 31945486 TGGAGGGTGATAGTCTTCTCCGTAAGAGTTTGTGTGAAAATCTGCATTTTG 31945436 >seq79 Length=10412959 Score = 109 bits (120), Expect = 1e-18 Identities = 145/202 (72%), Gaps = 7/202 (3%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || ||||| | || ||||| || ||||| | || || ||||| ||| Sbjct 108397 TCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAG 108338 Query 288343 ATCAGACGCTGTTGA-------GAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTT 288395 || || | ||| ||| || || || ||||| ||||||||||| || || || Sbjct 108337 ATGAGCCTCTGCTGATCGGGGAGAGGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCTT 108278 Query 288396 CACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGT 288455 ||| ||||| || | || || | || ||||| || ||||| ||||| ||||||| || Sbjct 108277 CACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCATGGT 108218 Query 288456 CTTGACGAATATCTGCATTATG 288477 ||| | || ||||||||| || Sbjct 108217 CTTCGCAAAGATCTGCATTTTG 108196 >seq102 Length=8035806 Score = 105 bits (116), Expect = 2e-17 Identities = 163/231 (71%), Gaps = 5/231 (2%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || |||| | || || |||| ||| || ||||| || | ||||| Sbjct 241677 CCACCCCGAGGTCTCAACACCAGGTGAAGCGTAGACTCCTTTTGAATGCTGTAGTC---- 241732 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| ||| || || || |||||||| | ||||||| | || Sbjct 241733 AAAGTACGTCCATCTTCCGGTTGCTTGCCAGCAAAGATCAGCCTCTGTTGATCAAGAGGA 241792 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| | || || || |||||||| ||| | ||| || Sbjct 241793 ATTCCTTCCTTATCCTGGATCGTGGCCTTTACATTTTCTATCTCATCCGAGGGTTCGACC 241852 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| |||||||| | || || || ||||| ||||||||| || Sbjct 241853 TCGAG-GTGATGGTCTTCCCCCTAAGGGTTTTCACGAAAATCTGCATTGTG 241902 >seq11 Length=43820709 Score = 105 bits (116), Expect = 2e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || | ||| | ||||||||| || || || | ||||| || || || Sbjct 25320767 TCTTTCTGGATGTTGTTGTCTGAGAGCGTGCGGCCATCCTCCAGCTGTTTGCCGGCAAAT 25320826 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| || | |||||| || | || || || ||||| ||||| || || Sbjct 25320827 ATCAGACGCTGCTGGTCAGGTGGGATACCCTTCTTGTCTTGAATTTTGGCTTTGACATTC 25320886 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| || || || ||||| || Sbjct 25320887 TCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACA 25320946 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 25320947 AAGATCTGCAT 25320957 >seq116 Length=6990774 Score = 104 bits (114), Expect = 6e-17 Identities = 140/195 (72%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || ||||| | | || | ||| ||||| | ||| || || || ||| Sbjct 541695 TCCTTTTGAATGTTGTAGTCAGACAAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAG 541636 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | || ||| | || |||||||| ||||||||||| || || || |||||| Sbjct 541635 ATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGGCCTTTACGTTT 541576 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 ||||| | ||| | ||| | | ||| ||||| |||||||| | || || || || Sbjct 541575 TCTATTGTATCCGAAGGTTCAGCCTTGAGGGTGATGGTCTTCCCCATAAGGGTTTTCACA 541516 Query 288463 AATATCTGCATTATG 288477 || ||||||||| || Sbjct 541515 AAAATCTGCATTTTG 541501 >seq6 Length=49021937 Score = 102 bits (112), Expect = 2e-16 Identities = 153/216 (71%), Gaps = 6/216 (3%) Strand=Plus/Minus Query 288261 AAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTC 288320 |||||| ||||| | || ||||| ||||| || ||||| | || |||| || || Sbjct 37593747 AAGTACTAGATGTAGAATGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCACCCATC 37593688 Query 288321 TTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCTGGGATTCCTTCTTT 288377 ||| | || ||||| || ||||||| | |||| | || | |||| ||||| | Sbjct 37593687 TTCCAGCTGCTTTCCGGCAAAGATCAACCTCCGCTGGTCAGGAA---GGATGCCTTCCTG 37593631 Query 288378 ATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGAT 288437 |||||||| || || || ||||| || || | || || | || || || || ||||| Sbjct 37593630 GTCCTGGATCTTTGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGAT 37593571 Query 288438 CGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| ||||| || ||||||||||| Sbjct 37593570 GGTCTTACCAGTCAGGGTCTTCACTAATATCTGCAT 37593535 >seq49 Length=16587080 Score = 100 bits (110), Expect = 7e-16 Identities = 123/168 (73%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 288310 GTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATT 288369 |||| ||| ||||| | ||| ||||| || |||||||| | || ||| | || ||| Sbjct 2336160 GTGCATCCATCTTCCAGTTGCTTTCCAGCCAAGATCAGTCTTTGATGATCAGGAGGAATT 2336219 Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 || || |||||||| || || || || || ||||||| ||| | || |||||| Sbjct 2336220 CCATCCTTATCCTGCATCTTAGCCTTTACAGTTTCTATCATATCCGAGGGTTTGACTTCG 2336279 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || ||||| ||||||||||| || || || ||||| ||||| ||| || Sbjct 2336280 AGGGTGATGGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGTATTTTG 2336327 >seq218 Length=888862 Score = 98.7 bits (108), Expect = 2e-15 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| | || ||||||| || || || || || || ||||| | Sbjct 160565 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 160624 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | ||| || || || ||||| | | || ||| | || Sbjct 160625 AAAGTACGTCCCTCTTCCAGTTGCTTGCCAGCAAAGAT--GTCTTTGCTGATCAGGAGGA 160682 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| || | || || |||||||| ||| | ||| || Sbjct 160683 ATTCCTTCCTTATCCTGGATCTTGACCTTTACATTTTCTATCCTATCCGAGGGTTCAACC 160742 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || || ||||| |||||||| | || || || ||||| ||||||||| || Sbjct 160743 TCAAGGGTGATGGTCTTCCCCTTAAGGGTTTTCACGAAAATCTGCATTTTG 160793 Score = 96.9 bits (106), Expect = 8e-15 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGT-GCTTTCTTTTTGGATATTATAGTCGGC 288305 ||||| || ||||| | || ||||||| || | ||||| | | || || ||||| | Sbjct 683674 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTTCTTCT-GAATGTTGTAGTCAGA 683732 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 | || | ||| ||||| | ||| || || || |||||||| | || ||| | || Sbjct 683733 CAAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGG 683792 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 |||||||| ||||||||||| || || || || |||||||| | || ||| | Sbjct 683793 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCCA---GC---GTTCAGC 683846 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 |||| ||||| |||||||| | || || || ||||| ||||||||| || Sbjct 683847 CTCGAAGGTGATGGTCTTCCCCTTAAGGGTTTTCACGAAAATCTGCATTTTG 683898 >seq77 Length=10698663 Score = 98.7 bits (108), Expect = 2e-15 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || ||||| | || || || || ||||| || | ||| || ||| Sbjct 10127820 AGAGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCGGGGGGG 10127761 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| ||||||||||| || || ||||| ||||| || | || || | || || Sbjct 10127760 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 10127701 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| ||||| || ||||| ||||| ||||| |||||||| Sbjct 10127700 TCCAGGGTGATGGTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 10127654 >seq101 Length=8127303 Score = 96.9 bits (106), Expect = 8e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 |||| | | ||||| | || ||||||| || || ||||| || |||||||| | Sbjct 4241880 CCACTGTGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTATAGTCAGAC 4241939 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | | ||||| | ||| || || || |||||||| | || ||| | || Sbjct 4241940 AAAGTACAACAATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 4241999 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||||||||||||||| || || || || |||||| | ||| ||| | Sbjct 4242000 ATTCCTTCTTTATCCTGGATCTTGGCCTTTACATTTTCTGTCATATCTGAGAGTTCATCC 4242059 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| ||||| |||||||| | || || || | ||| ||||||||| || Sbjct 4242060 TCGAGGGTGATAGTCTTCCCCATAAGGGTTTTCATGAAAATCTGCATTTTG 4242110 >seq9 Length=44311105 Score = 95.1 bits (104), Expect = 3e-14 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 ||||| ||||| || || || | |||||| | || || || | ||||| | || || Sbjct 19097317 TCTTTCTGGATGTTGTATTCTG--AGCGTGAGGCCATCCTCCAGCTGTTTGCTGGCAAAT 19097260 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||||||||| || | |||||| || || || || || ||||| ||||| || || Sbjct 19097259 ATCAGACGCTGCTGGTCAGGTGGGATACCCTCCTTGTCTTGAATTTTGGCTTTGACATTC 19097200 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || || | || || || || ||||| ||||| || || || ||||| || Sbjct 19097199 TCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTCACA 19097140 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 19097139 AAGATCTGCAT 19097129 >seq63 Length=13147851 Score = 91.5 bits (100), Expect = 3e-13 Identities = 120/164 (73%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || ||||| | | || ||||| ||||| | ||| || || || ||| Sbjct 9542293 TCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAG 9542352 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | || ||| | ||||||||||| ||||||||||| || || || || ||| Sbjct 9542353 ATCAGTCTTTGCTGATCAGGAGGGATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTT 9542412 Query 288403 TCTATAGAATC-GCTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445 ||||| | ||| | | | ||| || || || ||||| ||| ||| Sbjct 9542413 TCTATCGTATCTGATAG-TTCAACCTCAAGGGTGATGGTCCTCC 9542455 >seq59 Length=14671897 Score = 91.5 bits (100), Expect = 3e-13 Identities = 154/223 (69%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || | ||| |||| ||| || || || || || ||||| | Sbjct 11745124 CCACCTCGGAGACGGAGGATGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAT 11745065 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || |||| || ||||| | ||||| | || ||||||| | |||||| | ||| Sbjct 11745064 AGGTTGCGCCCATCTTCCAGCTGTTTCCTGGCAAAGATCAATCTCTGTTGGTCAGGAGGG 11745005 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || || ||||| || || || ||||| | || | || || | || || Sbjct 11745004 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGACGTTCTTAATGGTGTCACTGGGCTCGACC 11744945 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCT 288469 || || ||||| ||||| | |||||||||||| | || |||| Sbjct 11744944 TCAAGGGTGATGGTCTTACTGGTCAGAGTCTTCAGAAAGATCT 11744902 >seq48 Length=16679805 Score = 91.5 bits (100), Expect = 3e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| | || ||||||| || || ||||| || || ||||| | Sbjct 11416469 CCACCAGGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 11416528 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || | ||| |||| | ||| || || || |||||||| | || ||| | || Sbjct 11416529 AAAGTACATCCACCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCAGGAGGA 11416588 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||||| ||||| || ||||| | ||| | ||| || Sbjct 11416589 ATTCCTTCCTTATCCTGGATTTCAGCTTTTACACTTTCTGTCATATCCAGGGTTTCAACC 11416648 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 | ||| ||||| |||||||| || || || || || || || ||| || Sbjct 11416649 TTGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACAAAAATGTGCTTT 11416696 >seq29 Length=23066823 Score = 87.8 bits (96), Expect = 4e-12 Identities = 158/231 (68%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || | ||| | || ||||||| || || || || || || ||||| Sbjct 6881220 CCACCACGAAATCTCAACACAAGATGAAGTGTAGACTCCTTCTGAATGTTGTAGTC---- 6881165 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 | || ||||| ||||| | ||| || || || |||||||| || ||| | || Sbjct 6881164 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTTTTTGCTGAACAGGAGGA 6881105 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| ||||||||||| | || || | |||||||| | | | | ||| || Sbjct 6881104 ATTCCTTCCTTATCCTGGATCCTGGCCTTTATATTTTCTATCGTAACCAAGGGTTCAACC 6881045 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 ||||| |||| |||||||| | || || || | ||| ||||||||| || Sbjct 6881044 TCGAGGGTGACGGTCTTCCCCATAAGGGTTTTCATGAAAATCTGCATTTTG 6880994 >seq67 Length=12849963 Score = 86.0 bits (94), Expect = 1e-11 Identities = 161/234 (69%), Gaps = 7/234 (3%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| | ||||| || || ||||||| || || ||||| || || ||| Sbjct 7824668 CCACCACAAAGTCTCAGCACAAGATGAAGAGTAGACTCCTTTTGAATGTTGCGGTCACTC 7824727 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGAC---GCTGTTGAGAATCT 288363 || || |||| ||||| | ||| || || | || ||||| | |||| | |||| Sbjct 7824728 AGAGTACGTCTATCTTCCAGTTGCTTGCCAGGAAACATCAGTCTTTGCTGATCAGAA--- 7824784 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || | |||||| ||||||||||| | || || || |||||||| ||| | ||| Sbjct 7824785 GGAACTCCTTCCTTATCCTGGATCTCGGCCTTTACATTTTCTATCATATCCAAGGGTTCA 7824844 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || ||||| ||||| | |||||| | ||||| || || || ||||||||| || Sbjct 7824845 ACCTCGAGGGTGATGGCCTTCCC-CTAAGAGTTTTTACAAAAATCTGCATTTTG 7824897 >seq55 Length=16221106 Score = 84.2 bits (92), Expect = 5e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 35017 CTTCTTCCTCGGGAGTGATTTCGTTTTCGATACCGAACACTTTTCGAATCTCTTCCGGAG 35076 |||| ||||| ||| | || |||| |||| ||| | || |||||||| || |||| Sbjct 10553964 CTTCCTCCTCTTCAGTAAAGTCATTTTTGATATTGAAGATCTTGCGAATCTCCTCAGGAG 10553905 Query 35077 TTTTTCCTTTTATTTTATCGGCAATAGCTTTGCATAGAACATCAAGCATACTCTTTATGT 35136 |||| || || || ||| ||||| || |||||| ||||||||||| || || |||| Sbjct 10553904 TTTTCCCCTTGATCATATTGGCAACAGTCTTGCATGTAACATCAAGCAAACCTTTGATGT 10553845 Query 35137 TCAAGAAATTCGCTCCTTGAATCAATTCGAA 35167 | ||| |||| || | |||| | ||| || Sbjct 10553844 TTAAGTAATTTGCAGCCAGAATAAGTTCAAA 10553814 >seq21 Length=27742158 Score = 84.2 bits (92), Expect = 5e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| ||||| ||||||||||| || || || || ||||| || | || || | || Sbjct 616447 GGGATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCACTAGGCTCC 616388 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATG 288477 || | || ||||| ||||| || ||||| ||||| ||||| ||||||||| || Sbjct 616387 ACCTTCAGGGTGATGGTCTTGCCAGTCAGGGTCTTCACGAAGATCTGCATTTTG 616334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179613802931108