Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq258 93.3 5e-14
seq234 93.3 5e-14
seq57 93.3 5e-14
seq33 93.3 5e-14
seq23 93.3 5e-14
seq9 84.2 3e-11
>seq258
Length=193273
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 80049 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 80107
>seq234
Length=554799
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 252153 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 252211
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 253314 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 253256
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 307271 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 307329
Score = 89.7 bits (98), Expect = 6e-13
Identities = 55/59 (93%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||| ||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 405409 TAGCTCAGTCGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGACCCCCGT 405351
>seq57
Length=15281321
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 3316814 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 3316756
>seq33
Length=21137282
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Plus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 7612584 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 7612642
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 7641071 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 7641013
>seq23
Length=26360658
Score = 93.3 bits (102), Expect = 5e-14
Identities = 56/59 (95%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||
Sbjct 110432 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 110374
>seq9
Length=44311105
Score = 84.2 bits (92), Expect = 3e-11
Identities = 75/94 (80%), Gaps = 0/94 (0%)
Strand=Plus/Plus
Query 109753 TAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAA 109812
|||||||| | ||||| ||||| | | ||||||| || || ||||| || |||||||||
Sbjct 1878145 TAGATGTTGCTGGTGTAAGGTTCAATAGACTCATTATTCCCCAGGATCTGAGCAGTGGAA 1878204
Query 109813 GCTGTGGGCATGGGAGCCATGAGAAGACTGTTTC 109846
||||| ||||| || || || || | ||||||||
Sbjct 1878205 GCTGTAGGCATCGGGGCAATAAGTAAACTGTTTC 1878238
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588956225130800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |