Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_015049.1
Length=124335
Score E
Sequences producing significant alignments: (Bits) Value
seq232 82.4 6e-11
>seq232
Length=582148
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
|||| || | ||||| || || ||| | ||||||| | ||| || | | ||||
Sbjct 95581 CCTCGTGCTGCACATGGCACGTGTATCTCTGCTCTTCTCCAGAAGGCACCACCACAGCTG 95640
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
|||||||||| || |||||||| || ||||| ||||| ||||| || ||| | | ||
Sbjct 95641 CCCACTTCTGGAAGGTTCCATCCCCTGCTGGCCTGGTCTCCACAAGCTCCATGTCCTGAG 95700
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528
| | | ||| | || ||||| || | || || |||||||| |||||||| ||
Sbjct 95701 TTTGGTCCTCCCCATCCCGCTGCCAGGTCAGTGTGATCTCCGCAGGGTAGAAGCCCAGGG 95760
Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAG 558
|||| || | || || | | | ||||||
Sbjct 95761 CCCAGCACCTCAGGGTGGCCTCATGGTCAG 95790
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 349 CCTCATGTTTTACATGACAGGTATATTTATGCTCTTTATGTGCAGGTACTTCTATGGCTG 408
|||| || | ||||| || || ||||| ||||||| | ||| || | | ||||
Sbjct 165172 CCTCGTGCTGCACATGGCACGTGTATTTCTGCTCTTCTCCAGAAGGCACCACCACAGCTG 165231
Query 409 CCCACTTCTGAAAAGTTCCATCTCCAGCTGGTCTGGTTTCCACCTGCCCCACCCCATCAG 468
||||||||||||| |||||||| || || || ||||| ||||| | ||| | | ||
Sbjct 165232 CCCACTTCTGAAAGGTTCCATCCCCTGCGGGCCTGGTCTCCACAAACTCCATGTCCTGAG 165291
Query 469 TCAGTTGCTCTGCTCCCATGTGCCACGTTATGGTAATGTCCGCAGGATAGAAGCCAGTGG 528
| | | ||| | || ||||| || | || || |||||||| |||||||| ||
Sbjct 165292 TTTGGTCCTCCCCATCCCGCTGCCAGGTCAGTGTGATCTCCGCAGGGTAGAAGCCCAGGG 165351
Query 529 CCCAACATTTTAGTGTTACTTGACGGTCAG 558
|||| || | || || | | | ||||||
Sbjct 165352 CCCAGCACCTCAGGGTGGCCTCATGGTCAG 165381
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397734179496816
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |