Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq134 82.4 6e-11
seq38 82.4 6e-11
>seq134
Length=5851302
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
|||||| | ||| || || ||| || ||||| ||||| ||||| | | | || | ||
Sbjct 3733372 CAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGTCCATC 3733313
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|||| ||||| || ||||| ||||||| || ||||| | |||| || ||||| ||
Sbjct 3733312 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 3733253
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||| |||||| | | | ||||| | || ||||| | || || ||
Sbjct 3733252 CTGGATCTTGGCCTTTACATTTTCTATCGTATCTGAGGGTTCAACCTCGAGGGTGATGGT 3733193
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||| | ||||| || |||||||||||
Sbjct 3733192 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 3733160
>seq38
Length=19171412
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 48554 CAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTC 48613
|||||| | ||| || || ||| || ||||| ||||| ||||| | | | || | ||
Sbjct 14820530 CAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGTCCATC 14820589
Query 48614 GTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTC 48673
|||| ||||| || ||||| ||||||| || ||||| | |||| || ||||| ||
Sbjct 14820590 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 14820649
Query 48674 GCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGT 48733
||||| |||||| | | | ||||| | || ||||| | || || ||
Sbjct 14820650 CTGGATCTTGGCCTTTACATTTTCTATCGTATCTGAGGGTTCAACCTCGAGGGTGATGGT 14820709
Query 48734 TTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||| | ||||| || |||||||||||
Sbjct 14820710 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCAT 14820742
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380925129769578
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |