Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq37 116 7e-21
>seq37
Length=19344684
Score = 116 bits (128), Expect = 7e-21
Identities = 298/447 (67%), Gaps = 14/447 (3%)
Strand=Plus/Minus
Query 25595 ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGAT 25654
|||| |||| ||||||||||| | |||| ||||| || || || || ||| |||
Sbjct 212042 ACGTTCTGGCTTTCTTTGCAGCAAGTTATGGCATAGTAAATGAAAACTTGGTGGAGCGAT 211983
Query 25655 TCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCG 25714
| | | ||||| ||| | || ||| | |||||||| || ||||| ||||||||
Sbjct 211982 TTAGCCAAGAAGTTCAGATCACAGAAGCCCACTGTTTCTATGGCTTCCAAATGGCCATGA 211923
Query 25715 AAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGTCG 25771
|||| | || ||||| | ||| | || || || || ||||| | ||| |
Sbjct 211922 AAAACATACATTCTGAAATATAT---AGTCTCCTTATTGACACTTACATAAAAGATCCCA 211866
Query 25772 CCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGC 25831
||| || || || || ||| || || || || | |||||| ||||||
Sbjct 211865 ACGAAAGGGAATTTCTCTTCAATGCTATTGAAACGATGCCTTGTGTCAAGAAGAAGGCAG 211806
Query 25832 GGTGGGCCATGAAGTGGATCA---ACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888
|||||| || ||| | ||| |||| ||||| | ||| || | | | ||
Sbjct 211805 ATTGGGCCTTGCTCTGGGTTGGGGACAA--AGAG-GCTACCTATGGTGAACACGTTGCAG 211749
Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948
|||||||||| ||||| |||||||| || ||||| ||||| |||| ||||||||||
Sbjct 211748 CCTTTGCTGCAGTGGAAGGCATCTTCTTTTCTGGTTCTTTTGCATCCATATTCTGGCTCA 211689
Query 25949 AGCAGAAGGGGAC-CATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007
|| | | | |||| ||||| || || ||||| || || || | |||| || |||
Sbjct 211688 AG-AAACGAGGACTGATGCCTGGCCTCACATTTTCTAATGAACTTACTGGCAGAGATGAG 211630
Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTG 26034
||| | ||| | ||||| || ||||||
Sbjct 211629 GGTTTACACTGTGATTTCGCTTGCCTG 211603
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928813614035840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |