Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_019559.1
Length=202946
Score E
Sequences producing significant alignments: (Bits) Value
seq74 132 6e-26
>seq74
Length=10970457
Score = 132 bits (146), Expect = 6e-26
Identities = 214/305 (70%), Gaps = 2/305 (1%)
Strand=Plus/Minus
Query 153707 AAGTGGTAACACAGGATGTAAATTCATCACTTCGAT-CGCCCGCGTCCCTCAGATGCTCG 153765
||||||| || ||||||| ||| | || | || |||| || ||| | ||||||||
Sbjct 8345794 AAGTGGTGACCCAGGATG-AAAGAGAGCAGCTGAATACGCCTGCTTCCTTAAGATGCTCT 8345736
Query 153766 TTGAAAACTACACAAGAACCTTTAATTGTAACGTGGCAAAAGAAGAAAGCTGTAGGTCCA 153825
|| ||||||| | ||| | ||||| || ||||| || |||||||||||| | |||
Sbjct 8345735 CTGCAAACTACCTACGAAGTCCTGATTGTGACATGGCAGAAAAAGAAAGCTGTAAGCCCA 8345676
Query 153826 GAAAATATGGCCACGTATAGCAAAGCCCACGGTGTAGTGCTTCAGCCCACATATAAAGAT 153885
||||| || ||||| | ||||| | | || || ||| | ||||| | ||||| ||
Sbjct 8345675 GAAAACATAGCCACCTTCAGCAACAGCTATGGGGTGGTGGTCCAGCCTGCCTATAAGGAC 8345616
Query 153886 AGAATTAATATAACCGAATTAGGTCTTTTAAACAGTAGTATAACGTTTTGGAATGCAACA 153945
| | || || ||| | | || || |||| | || || | |||||| | ||
Sbjct 8345615 AAGTTGAACATTACCCAGCTGGGACTCCAAAACTCAACCATCACCATCTGGAATACCACC 8345556
Query 153946 CTGGATGATGAAGGCTGTTATATGTGTCTGTTTAATATGTTCGGTTCTGGTAAGGTATCG 154005
||||| |||||||| ||||| |||||||| || |||| || |||| ||| ||| | ||
Sbjct 8345555 CTGGAGGATGAAGGGTGTTACATGTGTCTCTTCAATACCTTTGGTTATGGGAAGATCTCA 8345496
Query 154006 GGAAC 154010
|||||
Sbjct 8345495 GGAAC 8345491
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 649277399779360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |