Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq101 87.8 3e-12
>seq101
Length=8127303
Score = 87.8 bits (96), Expect = 3e-12
Identities = 153/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879
|||||||| || || || ||||| | | || || ||||| || | || | |||
Sbjct 4242109 AAAATGCAGATTTTCATGAAAACCCTTATGGGGAAGACTATCACCCTCGAGGATGAACTC 4242050
Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939
|| |||| | ||| || || || || || ||||||||||| || ||||| ||
Sbjct 4242049 TCAGATATGACAGAAAATGTAAAGGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTGAT 4241990
Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999
|| |||||| |||| | ||| || ||||| || |||||| | ||||| || || |||
Sbjct 4241989 CAGCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATTGTTGTACTTTGTCTGACTAT 4241930
Query 156000 AATATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGA 156038
|| || || ||| ||| | || |||||| | ||||| |||
Sbjct 4241929 AACAT-TCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGA 4241891
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731847427397600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |