Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq73 170 2e-36
seq234 158 1e-32
seq225 158 1e-32
seq153 158 1e-32
seq23 152 6e-31
seq5 123 3e-22
seq184 96.9 4e-14
seq22 93.3 5e-13
seq14 93.3 5e-13
seq2 91.5 2e-12
>seq73
Length=11194871
Score = 170 bits (188), Expect = 2e-36
Identities = 160/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || || ||| | |||||||||||| ||||| | |||||| | ||
Sbjct 1151654 GCTTGGCCAGCTCCCCCGGCAGCAGCAGGCGCACGGCCGTCTGCACCTCGCGGGACGTGA 1151595
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| ||| ||||||| || ||||||| |||| |
Sbjct 1151594 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAGA 1151535
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| |||||||| ||||||||
Sbjct 1151534 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 1151475
Query 1254523 GCACCTGCTTGAGCACCTTGTAGA 1254546
|||||||||| |||||||||||||
Sbjct 1151474 GCACCTGCTTCAGCACCTTGTAGA 1151451
Score = 170 bits (188), Expect = 2e-36
Identities = 160/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || || ||| | |||||||||||| ||||| | |||||| | ||
Sbjct 1158027 GCTTGGCCAGCTCCCCCGGCAGCAGCAGGCGCACGGCCGTCTGCACCTCGCGGGACGTGA 1158086
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| ||| ||||||| || ||||||| |||| |
Sbjct 1158087 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGAGGCCTCGCTGGCGATGCGCTCGAAGA 1158146
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| |||||||| ||||||||
Sbjct 1158147 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGACGAGATGCCGGTGTCGGGGT 1158206
Query 1254523 GCACCTGCTTGAGCACCTTGTAGA 1254546
|||||||||| |||||||||||||
Sbjct 1158207 GCACCTGCTTCAGCACCTTGTAGA 1158230
>seq234
Length=554799
Score = 158 bits (174), Expect = 1e-32
Identities = 156/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 326244 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 326185
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| |||||| ||||||| |||| |
Sbjct 326184 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 326125
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 326124 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 326065
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 326064 GCACCTGCTTCAGCACCTTGTA 326043
Score = 158 bits (174), Expect = 1e-32
Identities = 156/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 339768 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 339709
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| |||||| ||||||| |||| |
Sbjct 339708 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 339649
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 339648 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 339589
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 339588 GCACCTGCTTCAGCACCTTGTA 339567
>seq225
Length=700218
Score = 158 bits (174), Expect = 1e-32
Identities = 156/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 670676 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 670735
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| |||||| ||||||| |||| |
Sbjct 670736 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 670795
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 670796 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 670855
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 670856 GCACCTGCTTCAGCACCTTGTA 670877
Score = 158 bits (174), Expect = 1e-32
Identities = 156/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 690517 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 690576
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| |||||| ||||||| |||| |
Sbjct 690577 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 690636
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 690637 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 690696
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 690697 GCACCTGCTTCAGCACCTTGTA 690718
Score = 158 bits (174), Expect = 1e-32
Identities = 156/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 698715 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 698656
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| |||||| ||||||| |||| |
Sbjct 698655 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 698596
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 698595 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 698536
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
|||||||||| |||||||||||
Sbjct 698535 GCACCTGCTTCAGCACCTTGTA 698514
Score = 91.5 bits (100), Expect = 2e-12
Identities = 100/133 (75%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 638635 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 638694
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| |||||| ||||||| |||| |
Sbjct 638695 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 638754
Query 1254463 TGTCGTTGACAAA 1254475
|||||||||| ||
Sbjct 638755 TGTCGTTGACGAA 638767
>seq153
Length=4070394
Score = 158 bits (174), Expect = 1e-32
Identities = 156/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | |||||||||||| |||||||||||||| | ||
Sbjct 3889491 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGA 3889432
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| ||| ||||| ||||||| |||| |
Sbjct 3889431 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGACGCCTCCCCCGCGATGCGCTCGAAGA 3889372
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | ||| |||||||| ||||||||
Sbjct 3889371 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCTTTGGACGAGATGCCGGTGTCGGGGT 3889312
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 3889311 GGACCTGCTTCAGCACCTTGTA 3889290
Score = 158 bits (174), Expect = 1e-32
Identities = 156/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| |||||| ||| | |||||||||||| |||||||||||||| | ||
Sbjct 3944020 GCTTGGCCAGCTCGCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCGCGGGACGTGA 3943961
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| ||| ||||||||| |||||||||| ||| ||||| ||||||| |||| |
Sbjct 3943960 TGGTGGAGCGCTTGTTGTAGTGCGCCAGGCGGGACGCCTCCCCCGCGATGCGCTCGAAGA 3943901
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | ||| |||||||| ||||||||
Sbjct 3943900 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCTTTGGACGAGATGCCGGTGTCGGGGT 3943841
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 3943840 GGACCTGCTTCAGCACCTTGTA 3943819
>seq23
Length=26360658
Score = 152 bits (168), Expect = 6e-31
Identities = 155/202 (77%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 488726 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 488667
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| |||||| ||||||| |||| |
Sbjct 488666 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 488607
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 488606 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 488547
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 488546 GGACCTGCTTCAGCACCTTGTA 488525
Score = 143 bits (158), Expect = 3e-28
Identities = 153/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| || ||||||| | | | ||
Sbjct 353077 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCATCGGGATCTCCCTGGAGGTGA 353136
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| |||||| ||||||| |||| |
Sbjct 353137 TAGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 353196
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 353197 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 353256
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| |||||||||||
Sbjct 353257 GGACCTGCTTCAGCACCTTGTA 353278
Score = 143 bits (158), Expect = 3e-28
Identities = 153/202 (76%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 636009 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 635950
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| |||||| ||||||| |||| |
Sbjct 635949 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 635890
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
|||||||||| || |||||||||| ||| | |||| ||||||||| ||||||||
Sbjct 635889 TGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 635830
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
| |||||||| || ||||| ||
Sbjct 635829 GGACCTGCTTTAGAACCTTATA 635808
Score = 107 bits (118), Expect = 2e-17
Identities = 145/202 (72%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| || ||||||| | | | ||
Sbjct 370458 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCATCGGGATCTCCCTGGAGGTGA 370517
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| |||||| | ||| | || |
Sbjct 370518 TAGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCCATGTGCTCAAAGT 370577
Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522
||| ||||| || |||||||||| ||| | ||| ||||||||| ||||| ||
Sbjct 370578 TGTTGTTGAGGAAGGAGTTCATGATGCCCATGGCATTGAAGGAGATGCCGGTGTCGGCGT 370637
Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544
||| |||||| |||||||||||
Sbjct 370638 GCAACTGCTTCAGCACCTTGTA 370659
Score = 107 bits (118), Expect = 2e-17
Identities = 110/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 519222 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 519281
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| |||||| ||||||| |||| |
Sbjct 519282 TGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 519341
Query 1254463 TGTCGTTGACAAACGAGTTCATGA 1254486
|||||||||| || ||||||||||
Sbjct 519342 TGTCGTTGACGAAGGAGTTCATGA 519365
Score = 107 bits (118), Expect = 2e-17
Identities = 110/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402
|| ||||||| || ||| ||| | |||||||||||| ||||||||||| | | | ||
Sbjct 575032 GCTTGGCCAGCTCCCCGGGCAGCAGCAGGCGCACGGCCGTCTGGATCTCCCTGGAGGTGA 574973
Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462
| || ||||||||| | |||||||| ||| |||||| ||||||| |||| |
Sbjct 574972 TAGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGAAGCCTCGCCCGCGATGCGCTCGAAGA 574913
Query 1254463 TGTCGTTGACAAACGAGTTCATGA 1254486
|||||||||| || ||||||||||
Sbjct 574912 TGTCGTTGACGAAGGAGTTCATGA 574889
Score = 96.9 bits (106), Expect = 4e-14
Identities = 143/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 1254346 TGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCG 1254405
|||| |||| ||| ||| | |||||||||||| |||||||||| | | | ||| |
Sbjct 924386 TGGCTAGTTACCCGGGCAGCAGCAGGCGCACGGCCATCTGGATCTCCCTGGAGGTGATGG 924327
Query 1254406 TGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465
| || ||||| | |||||||| ||| |||||| || | ||||| || | |||
Sbjct 924326 TTGAGCACTTGTCATAATGCGCCAGGCGGGAAGCCTCGTTGGCAATGCGCTCAAAATTGT 924267
Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525
| | ||||| || ||||| | || | |||| ||||| | || |||||| |
Sbjct 924266 CAGTAACAAAAGAATTCATAATACTGATAGCCTTGGAAGAGATTTCAGTGTGGGGGTGAA 924207
Query 1254526 CCTGCTTGAGCACCTTGTAGATG 1254548
||||||| |||||||||||||||
Sbjct 924206 CCTGCTTCAGCACCTTGTAGATG 924184
Score = 91.5 bits (100), Expect = 2e-12
Identities = 77/95 (81%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 1254450 ATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATG 1254509
||||| |||| ||||||||||| || |||||||||| ||| | |||| |||||||
Sbjct 545945 ATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCATGATGCCCATGGCCTTGGAGGAGATG 546004
Query 1254510 CCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544
|| ||||||||| |||||||| |||||||||||
Sbjct 546005 CCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGTA 546039
>seq5
Length=50794693
Score = 123 bits (136), Expect = 3e-22
Identities = 128/168 (76%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 1254377 GGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCC 1254436
||| ||||||||||| | | | ||| || ||||||||| | |||||||| |||
Sbjct 39990708 GGCCGTCTGGATCTCCCTGGAGGTGATGGTCGAGCGCTTGTTGTAATGCGCCAGGCGGGA 39990649
Query 1254437 GGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGACCGACATCGA 1254496
|||||| ||||||| |||| ||||||||||| || |||||||||| ||| |
Sbjct 39990648 AGCCTCGCCCGCGATGCGCTCGAAGATGTCGTTGACGAAGGAGTTCATGATGCCCATGGC 39990589
Query 1254497 CTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1254544
|||| ||||||||| ||||||||| |||||||| |||||||||||
Sbjct 39990588 CTTGGAGGAGATGCCGGTGTCGGGGTGGACCTGCTTCAGCACCTTGTA 39990541
>seq184
Length=2850691
Score = 96.9 bits (106), Expect = 4e-14
Identities = 100/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224
|| || ||||| | || || || || |||||| | |||||||| | |||| ||| ||
Sbjct 2714337 ACGCTTTTTGAACTCATTCTGGCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTT 2714396
Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284
|||||| |||| ||||| ||||||||||| || | || |||||||| |||||||||
Sbjct 2714397 CCATGCAAGACTGTTGCCAATATGATCAAGGGGAAAACTCCTGAGGAGATTCGCAAGACC 2714456
Query 1592285 TTTAACATCAA 1592295
|| || |||||
Sbjct 2714457 TTCAATATCAA 2714467
>seq22
Length=27210278
Score = 93.3 bits (102), Expect = 5e-13
Identities = 89/114 (78%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 869830 CACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCATACTTGCTG 869889
|||||||||||||||||||| |||||||| ||||| |||||||||| ||| | | ||
Sbjct 23201225 CACCTCCTCGGCGGTCCAGAAGGAGGCCTCCGCCTTCTTGTACATCTGCCAGATGTCGTG 23201284
Query 869890 GTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCGCAACAGGGGTTC 869943
||| ||| ||||||| ||| |||||| ||||| || | || ||| || ||
Sbjct 23201285 GTACTCGATGGGGAAGATGACGAAGCGGCGCGGGTTCTCTCTCAGCAGCGGCTC 23201338
>seq14
Length=37227512
Score = 93.3 bits (102), Expect = 5e-13
Identities = 99/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224
|| || ||||| | || || || || |||||| | |||||||| | |||| ||| ||
Sbjct 12627443 ACACTTTTTGAACTCATTCTGGCTGCAAACTACTTAGACATCAAAGGTTTGCTTGATGTT 12627384
Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284
|||||| |||| ||||| ||||| ||||| || | || |||||||| |||||||||
Sbjct 12627383 ACATGCAAGACTGTTGCCAATATGATAAAGGGGAAAACTCCTGAGGAGATTCGCAAGACC 12627324
Query 1592285 TTTAACATCAA 1592295
|| || |||||
Sbjct 12627323 TTCAATATCAA 12627313
>seq2
Length=71252344
Score = 91.5 bits (100), Expect = 2e-12
Identities = 86/110 (78%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| || |||||||| |||||||| | |||| ||| || |||||| |||| |||||
Sbjct 7086301 GCTGCAAACTACCTAGACATCAAAGGTTTGCTTGATGTTACATGCAAGACTGTTGCCAAT 7086360
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295
||||| ||||| || | || |||||||| ||||||||||| || |||||
Sbjct 7086361 ATGATAAAGGGGAAAACTCCTGAGGAGATTCGCAAGACCTTCAATATCAA 7086410
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6106918774261462
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |