Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20 2011-11-17] 2,686 sequences; 2,608,588,537 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq59 136 4e-27 seq101 123 2e-23 seq102 114 1e-20 seq8 111 1e-19 seq116 107 2e-18 seq9 107 2e-18 seq85 105 6e-18 seq11 104 2e-17 seq14 102 7e-17 seq33 98.7 9e-16 seq27 98.7 9e-16 seq88 93.3 4e-14 seq48 93.3 4e-14 seq6 93.3 4e-14 seq49 89.7 5e-13 seq63 87.8 2e-12 seq86 86.0 6e-12 seq132 82.4 7e-11 >seq59 Length=14671897 Score = 136 bits (150), Expect = 4e-27 Identities = 162/220 (74%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || ||| |||| || || || || || || || ||| Sbjct 11745125 GATGCAGATCTTCGTGAAGACCCTTACCAGTAAGACCATCACCCTTGAGGTCGAGCCCAG 11745184 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||||||||||||| ||||| || ||||| || || Sbjct 11745185 TGACACCATTGAGAATGTCAAGGCAAAGATCCAAGACAAGGAAGGCATCCCTCCTGACCA 11745244 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||||||||||||||||||| ||| | | | | |||| || || || Sbjct 11745245 GCAGAGATTGATCTTTGCCGGGAAACAGCTGGAAGATGGGCGCACCCTGTCTGACTACAA 11745304 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTG 24922 ||| || || || || | || |||||||| |||| ||| Sbjct 11745305 CATCCAGAAAGAGTCCATTCTGCACTTGGTCCTGCGCTTG 11745344 Score = 131 bits (144), Expect = 2e-25 Identities = 151/201 (75%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 24708 AGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACA 24767 |||||||| | || || || ||| |||| || || || || || || || ||| |||| Sbjct 11744902 AGATCTTTCTGAAGACTCTGACCAGTAAGACCATCACCCTTGAGGTCGAGCCCAGTGACA 11744961 Query 24768 C-AGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAA 24826 | | || |||| || |||| |||||||||||| ||||| || ||||| || ||||| Sbjct 11744962 CCATTAAGAACGTCAAGGCAAA-GATCCAAGACAAGGAAGGCATCCCTCCTGACCAACAG 11745020 Query 24827 CGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATT 24886 | |||||||||||| ||||||||||||| ||| | | ||| | || || || |||||| Sbjct 11745021 AGATTGATCTTTGCCAGGAAACAGCTGGAAGATGGGCGCAACCTATCTGACTACAACATT 11745080 Query 24887 CAAAAGGAATCGACACTACAC 24907 || ||||| || || || ||| Sbjct 11745081 CAGAAGGAGTCCACCCTTCAC 11745101 >seq101 Length=8127303 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || || ||||| || | || || ||||| || ||||| | ||| | | Sbjct 4242106 ATGCAGATTTTCATGAAAACCCTTATGGGGAAGACTATCACCCTCGAGGATGAACTCTCA 4242047 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || | ||||| ||||| |||||||| || ||||||||||| ||||| ||||| Sbjct 4242046 GATATGACAGAAAATGTAAAGGCCAAGATCCAGGATAAAGAAGGAATTCCTCCTGATCAG 4241987 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | |||||||||| || || || ||||| |||| | | |||| || |||||| Sbjct 4241986 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATTGTTGTACTTTGTCTGACTATAAC 4241927 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 ||||||||||| || || || || | |||||| || Sbjct 4241926 ATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGA 4241891 >seq102 Length=8035806 Score = 114 bits (126), Expect = 1e-20 Identities = 156/216 (72%), Gaps = 4/216 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || || || || || || || |||||||| ||| || | Sbjct 179384 ATGCAGATTTTCGTGAAAACCCTTACGGGGAAGACCATCACCCTCGAAGTTGAACCCTCA 179443 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || | |||||| ||||| | ||||| || || ||| |||| ||||| ||||| Sbjct 179444 GATAAGATAGAAAATGTAAAGGCCACAATCCATGATAAGGAAAGAATTCCTCCTGATCAG 179503 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | |||||||||| || || || ||||| ||| || || | || || ||| Sbjct 179504 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATG-GACGTACTTT---GACTACAAC 179559 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 ||||||||||| || ||||| ||| |||||||| || Sbjct 179560 ATTCAAAAGGAGTCTACACTTCACCTGGTGTTGAGA 179595 Score = 89.7 bits (98), Expect = 5e-13 Identities = 153/219 (70%), Gaps = 5/219 (2%) Strand=Plus/Minus Query 24701 ACGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCC 24760 || |||||||| || | ||||| || | || || || || || ||||| || ||| || Sbjct 241901 ACAATGCAGATTTTCGTGAAAACCCTTAGGGGGAAGACCATCAC-CTCGAGGTCGAACCC 241843 Query 24761 ACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT 24820 | || |||||| ||||| | |||||| || || |||||||| |||| ||| Sbjct 241842 TCGGATGAGATAGAAAATGTAAAGGCCACGATCCAGGATAAGGAAGGAATTCCTCTTGAT 241783 Query 24821 CAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTAT 24880 ||||| | |||||||||| || || || | ||| ||| || || | || || Sbjct 241782 CAACAGAGGCTGATCTTTGCTGGCAAGCAACCGGAAGATG-GACGTACTTT---GACTAC 241727 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 | |||||||||||| || || || ||| |||||||| || Sbjct 241726 AGCATTCAAAAGGAGTCTACGCTTCACCTGGTGTTGAGA 241688 >seq8 Length=45331107 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | |||| || || | || ||||| || ||| | || ||| || | Sbjct 31945440 ATGCAGATTTTCACACAAACTCTTACGGAGAAGACTATCACCCTCCAGGTTGAACCCTCA 31945499 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || ||||| ||||| |||||||| || || |||||||| ||||| ||||| Sbjct 31945500 GATACGAAAGAAAACGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 31945559 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||||| ||| || || || || || ||| | | |||| || || ||| Sbjct 31945560 CAAAGATTGATCTATGCTGGCAAGCAACTAGAAGATGGACGTACTCTGTCTGACTACAAC 31945619 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 ||||||||||| || || || || |||||||| || Sbjct 31945620 ATTCAAAAGGAGTCTACTCTTCATCTGGTGTTGAGA 31945655 >seq116 Length=6990774 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || | || || || || || ||| | | ||| | | Sbjct 541505 ATGCAGATTTTTGTGAAAACCCTTATGGGGAAGACCATCACCCTCAAGGCTGAACCTTCG 541564 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || ||| |||||| ||||| |||||||| || || |||||||| ||||| ||||| Sbjct 541565 GATACAATAGAAAACGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 541624 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | |||||||||| || || || ||||| ||| | | |||| || || ||| Sbjct 541625 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGATGTACTTTGTCTGACTACAAC 541684 Query 24884 ATTCAAAAGGAATC 24897 ||||||||||| || Sbjct 541685 ATTCAAAAGGAGTC 541698 >seq9 Length=44311105 Score = 107 bits (118), Expect = 2e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || || || || || || || || || ||| Sbjct 14505646 GATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAG 14505705 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| || | || ||| || || |||||||| ||||| || || | || || Sbjct 14505706 TGACACCACTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAAGGTATCCCACTTGACCA 14505765 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATG-TCAGATTATA 24881 || || |||| |||||||| ||||||||||||||| | || | ||||| || | Sbjct 14505766 GCAGTGTCTGATATTTGCCGGCAAACAGCTGGAGGAT---GGCCGCACGCTCAGACTACA 14505822 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 |||| || ||||| || || || ||| ||||| |||| |||| || ||| Sbjct 14505823 ACATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGCGCCTGCGAGGTGGC 14505872 Score = 105 bits (116), Expect = 6e-18 Identities = 169/241 (70%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || || || || || || || || || ||| Sbjct 19097128 GATGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTCGAGCCCAG 19097187 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || ||| || || |||||||| || || || || || || || Sbjct 19097188 TGACACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCA 19097247 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATG-TCAGATTATA 24881 || ||| |||| |||||| | ||||||||||||||| | || | ||||| || | Sbjct 19097248 GCAGCGTCTGATATTTGCCAGCAAACAGCTGGAGGAT---GGCCTCACGCTCAGAATACA 19097304 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGC 24941 |||| || || || || || || ||| ||||| |||| |||| | ||| | ||||| Sbjct 19097305 ACATCCAGAAAGAGTCCACCCTGCACCTGGTGCTGCGCCTGCGAAGTGGCATTATTGAGC 19097364 Query 24942 C 24942 | Sbjct 19097365 C 19097365 Score = 95.1 bits (104), Expect = 1e-14 Identities = 167/241 (69%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||| ||||||||| | || || || || || | || || || || || || || ||| Sbjct 3708219 GATACAGATCTTTGTGAAGACCCTCACGGGCAGGACCATCACCCTTGAGGTCGAGCCCAG 3708278 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || || | || ||| || || |||||||| || || || || || || || Sbjct 3708279 TGATACCACTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACCTGACCA 3708338 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGAT-TCGAGAAACATGTCAGATTATA 24881 || || |||| |||||||| ||||||||||||||| || | || | ||||| || | Sbjct 3708339 GCAGTGTCTGATATTTGCCGGTAAACAGCTGGAGGATGGCGGCACAC-TCTCAGACTACA 3708397 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGC 24941 ||||||| || || || || || ||| | ||| |||| || | || ||| | ||||| Sbjct 3708398 ACATTCAGAAAGAGTCCACCCTGCACCTAGTGCTGCGCCTGTGAGGTGGCATTATTGAGC 3708457 Query 24942 C 24942 | Sbjct 3708458 C 3708458 >seq85 Length=9676098 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | ||||| || || || || || || || ||||| || ||| || | Sbjct 5982429 ATGCAGATTTTCGTGAAAACCCTTACAGGGAAGACCATCACCCTCGAGGTTGAACCCTCG 5982488 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || ||||| ||||| |||||||| || || |||||||| ||||| ||||| Sbjct 5982489 GATACGACAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 5982548 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||||||| || || | ||||| || | | |||| || || ||| Sbjct 5982549 CAAAGACGGATCTTTGCTGGCAAGTAACTGGAAGACAGACGTACTTTGTCTGACTACAAC 5982608 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 ||||||||||| || || || || | |||||| || Sbjct 5982609 ATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGA 5982644 >seq11 Length=43820709 Score = 104 bits (114), Expect = 2e-17 Identities = 167/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || || || || || || || || || ||| Sbjct 25320958 GATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCACCCTTGAGGTCGAGCCCAG 25320899 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || ||| || || |||||||| | || || || || || || Sbjct 25320898 TGACACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGAAGGGTATCCCACCTGACCA 25320839 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| |||| |||||||| ||||||||||||||| | | | ||||| | || Sbjct 25320838 GCAGCGTCTGATATTTGCCGGCAAACAGCTGGAGGATGGCCGCACGCTCTCAGACAACAA 25320779 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGCC 24942 ||| || || || || || || ||| ||||| ||| |||| || ||| | |||||| Sbjct 25320778 CATCCAGAAAGAGTCCACCCTGCACCTGGTGCTGCACCTGCGAGGTGGCATTATTGAGCC 25320719 >seq14 Length=37227512 Score = 102 bits (112), Expect = 7e-17 Identities = 140/194 (72%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| | ||||| || | || || | || || || || || ||| || || Sbjct 27607997 ATGCAGATTTTTGTGAAAACCCTCATGGGGAAGATCATCACCCTTGAGGTTGAACCCTCC 27607938 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| ||||| ||||| |||||||| || || |||||||| ||||| ||||| Sbjct 27607937 GACACGACAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 27607878 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || || ||||| ||| || | || | || || ||| Sbjct 27607877 GAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATA-GACATACTTT---GACTACAAC 27607822 Query 24884 ATTCAAAAGGAATC 24897 ||||||||||| || Sbjct 27607821 ATTCAAAAGGAGTC 27607808 >seq33 Length=21137282 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || ||||| || || || ||| Sbjct 15373530 ATGCAGATCTTCGTGAAGACCCTGACCGGCAAGACCATCACGCTGGAGGTGGAGCCCAGT 15373589 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || || |||||||| || || ||||| || |||||||| || Sbjct 15373590 GACACCATCGAAAATGTGAAGGCCAAGATCCAGGATAAGGAAGGCATCCCTCCCGACCAG 15373649 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC-ATGTCAGATTATAA 24882 || | | |||||||| || || |||||||| || | | | || | || || || || Sbjct 15373650 CAGAGGCTCATCTTTGCAGGCAAGCAGCTGGAAGA-TGGCCACACTCTTTCTGACTACAA 15373708 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||| || || || ||||| || ||| |||| |||| Sbjct 15373709 CATCCAGAAAGAGTCGACCCTGCACCTGGTCCTGCG 15373744 >seq27 Length=24139186 Score = 98.7 bits (108), Expect = 9e-16 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 24706 GCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGA 24765 ||||||||| || || || || || || || || || || ||||| || | ||| || Sbjct 5857922 GCAGATCTTCATGAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTCCAGCCCAGTGA 5857981 Query 24766 CACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACA 24825 || | |||| | || ||||||||| ||||||||||| || ||||| || || || Sbjct 5857982 CATTATTGAAAACATCAAGGCAAAGATCCAGGACAAAGAAGGCATCCCTCCTGAGCAGCA 5858041 Query 24826 ACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACAT 24885 | | ||||||||| |||||||||||||| || | | | | | || || || || || Sbjct 5858042 GAGATCGATCTTTGCTGGGAAACAGCTGGAAGACGGGCGCACCCTTTCTGACTACAATAT 5858101 Query 24886 TCAAAAGGAATCGACACTACACTTGGT 24912 || || || || || || ||| |||| Sbjct 5858102 CCAGAAAGAGTCCACCCTGCACGTGGT 5858128 >seq88 Length=9397244 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 || |||||||||| | || || || || || || || || || || | || || ||| Sbjct 1074348 GACGCAGATCTTTGTGAAGACCCTCACGGGCAAGACCATCACCCTTAAGGTCGAGCCCAG 1074289 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || ||| || || |||||||| || || || || | ||||| Sbjct 1074288 TGACACCATTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCATCTGATCA 1074229 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | |||| ||||| || ||||||||||||||| | | | ||||| || || Sbjct 1074228 GCAGCCTCTGATATTTGCTGGTAAACAGCTGGAGGATGGCCGCACACTCTCAGACTACAA 1074169 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||| || || || || || || |||| |||| ||| |||| || ||| Sbjct 1074168 CATCCAGAAAGAGTCCACCCTGCACTGGGTGCTGCACCTGCGAGGTGGC 1074120 >seq48 Length=16679805 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 24706 GCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGA 24765 ||| || ||| | ||||| || || || || || || || ||| | || ||| || || Sbjct 11416693 GCACATTTTTGTGAAAACCCTTACAGGGAAGACCATCACCCTCAAGGTTGAAACCCTGGA 11416634 Query 24766 CACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACA 24825 | ||||| |||||| | ||||| || || |||||||| ||||| ||||| || Sbjct 11416633 TATGACAGAAAGTGTAAAAGCTGAAATCCAGGATAAGGAAGGAATTCCTCCTGATCAGCA 11416574 Query 24826 ACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACAT 24885 | | |||||||||| || || || ||||| | | | | |||| || || ||||| Sbjct 11416573 AAGGCTGATCTTTGCTGGCAAGCAACTGGAAGGTGGATGTACTTTGTCTGACTACAACAT 11416514 Query 24886 TCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 ||||||||| || || || || | |||||| || Sbjct 11416513 TCAAAAGGAGTCTACTCTTCATCTTGTGTTGAGA 11416480 >seq6 Length=49021937 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||| || | || || || || ||||| || || || || || || || ||| Sbjct 37593534 GATGCAGATATTAGTGAAGACCCTGACTGGTAAGACCATCACCCTTGAGGTTGAGCCCAG 37593593 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || ||||||||| ||| | ||||| || | ||| || || Sbjct 37593594 TGACACCATTGAGAACGTCAAGGCAAAGATCCAGGACCAGGAAGGCATCCTTCCTGACCA 37593653 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 | | |||||||||||||| || |||||||| ||| | | | | |||| || || || Sbjct 37593654 GCGGAGGTTGATCTTTGCCGGAAAGCAGCTGGAAGATGGGTGCACCCTGTCTGACTACAA 37593713 Query 24883 CATTCAAAAGGAATCGACACTACA 24906 ||| || || || || | ||||| Sbjct 37593714 CATCCAGAAAGAGTCCATTCTACA 37593737 >seq49 Length=16587080 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/228 (70%), Gaps = 7/228 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 || ||||| || | ||||| || ||||| || || || || |||||||| || || | Sbjct 2336323 ATACAGATTTTCGTGAAAACCCTTACCGGGAAGACCATCACCCTCGAAGTCAAACCCTCG 2336264 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || | ||||||| ||||| ||||| || || || || ||||| ||||| ||||| Sbjct 2336263 GATATGATAGAAACTGTAAAGGCTAAGATGCAGGATAAGGATGGAATTCCTCCTGATCAT 2336204 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||| | ||||||| || || || || ||||| ||| || || | || | ||| Sbjct 2336203 CAAAGACTGATCTTGGCTGGAAAGCAACTGGAAGATG---GATGCACTTT-GACCACAAC 2336148 Query 24884 ATTCAAAAGGAATCGACAC-TACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||||| | | || | | ||||| |||||| || | || || || Sbjct 2336147 ATTCAAAAGG-AGCTACTCTTCCACTT-GTGTTGAGACTTCGTGGTGG 2336102 >seq63 Length=13147851 Score = 87.8 bits (96), Expect = 2e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 24771 TAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTT 24830 |||||| ||||| |||||||| || || |||||||| ||||| ||||| ||| | Sbjct 9542416 TAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATCCCTCCTGATCAGCAAAGAC 9542357 Query 24831 TGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAA 24890 |||||||||| || || || ||||| ||| | | |||| || || |||||||||| Sbjct 9542356 TGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTACAACATTCAAA 9542297 Query 24891 AGGAATCGACACT 24903 |||| || || || Sbjct 9542296 AGGAGTCTACTCT 9542284 >seq86 Length=9530769 Score = 86.0 bits (94), Expect = 6e-12 Identities = 150/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || || || || | || || || | ||| Sbjct 8872514 GATGCAGATCTTTGTGAAGACCCTCACAGGCAAGACCATCATCCTTGAGGTCGTGCCCAG 8872573 Query 24763 CGACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 ||||| | || |||| ||| | ||| || |||||||| || || || || || || | Sbjct 8872574 TGACACCATTGAGAACGTCAAAGCCAAA-ATTCAAGACAAGGAGGGTATCCCACCTGACC 8872632 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || | | |||| |||||| | ||||||||||||||| | | | ||||| || | Sbjct 8872633 AGCAGCATCTGATGTTTGCCAGCAAACAGCTGGAGGATGGCTGCACTCTCTCAGACTACA 8872692 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTG 24916 |||| || | || || || || ||| ||||| || Sbjct 8872693 ACATCCAGA--GAGTCCACCCTGCACCTGGTGCTG 8872725 >seq132 Length=5918258 Score = 82.4 bits (90), Expect = 7e-11 Identities = 153/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||| |||| | || || || || || || | || || || || || || ||| Sbjct 776555 GATGCAGAGCTTTGTGAAGACCCTCACAGGCAAGAACATCACCCTTGAGGTCGAGCCCAG 776614 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| || | || ||| || || |||||||| || || || || | || || Sbjct 776615 TGACACCACTGAGAATGTCAAAGCCAAAATTCAAGACAAGGAGGGTATCCCACTTGAGCA 776674 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | | |||| || || || | ||||||||||||| | | ||||| ||||| Sbjct 776675 GCACCATCTGATATTCGCTGGCAGACAGCTGGAGGATGGTGGCACTCACTCAGACTATAA 776734 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGG 24927 ||| || || || || || |||||| ||||| |||| |||| || Sbjct 776735 CATCCAGAAAGAGTCCACCCTACACGTGGTGCTGCGCCTGCGAGG 776779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449882494688080