Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20 2011-11-17] 2,686 sequences; 2,608,588,537 total letters Query= NC_022563.1 Length=148803 Score E Sequences producing significant alignments: (Bits) Value seq47 86.0 6e-12 >seq47 Length=17121399 Score = 86.0 bits (94), Expect = 6e-12 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 43867 TCCGCTGGAAGGTGCCGTCGAGGGCGGCCACGATGACGATCTTCCCCGCGTTCGCCATGT 43926 ||| ||||||||| ||||| || || ||||| ||||| ||||||| ||||| |||||| Sbjct 4876071 TCCTCTGGAAGGTCCCGTCCAGTGCAGCCACAATGACCGTCTTCCCAGCGTTGGCCATGG 4876012 Query 43927 CCTCGCAGAACTCCACTAGGTC 43948 |||| ||||||||||| | ||| Sbjct 4876011 CCTCACAGAACTCCACGATGTC 4875990 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476025616903280