Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20 2011-11-17] 2,686 sequences; 2,608,588,537 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq8 82.4 7e-11 >seq8 Length=45331107 Score = 82.4 bits (90), Expect = 7e-11 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 137199 CAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGC-TCGAGT 137257 ||| || | ||||| ||||| || ||||| |||||||| || || || | || | | Sbjct 31945652 CAACACCAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAGAGTACGTCCA-T 31945594 Query 137258 CTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGT 137317 |||| ||||| || ||||||||||||| | ||||||||| ||||| || ||||| || | Sbjct 31945593 CTTCTAGTTGCTTGCCAGCATAGATCAATCTTTGCTGATCAGGAGGAATTCCTTCCTTAT 31945534 Query 137318 CGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCG 137377 | || || |||| | ||| ||| |||| |||||| || | | || | | Sbjct 31945533 CCTGGATCTTGGCCTTTACGTTTTCTTTCGTATCTGAGGGTTCAACCTGGAGGGTGATAG 31945474 Query 137378 TCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 137411 |||| | || | |||| | ||| || ||||| Sbjct 31945473 TCTTCTCCGTAAGAGTTTGTGTGAAAATCTGCAT 31945440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488527597135200