Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20 2011-11-17] 2,686 sequences; 2,608,588,537 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq8 104 4e-17 >seq8 Length=45331107 Score = 104 bits (114), Expect = 4e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444 |||||||||| | |||||||||| | || || || |||||||||||||| || || || Sbjct 41299860 TGGTGGTACTTTGTATCTAAAGGAGTTGAGTATTTGGATACAGTGTTTTTTATTCTGAGA 41299919 Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504 || || || || ||| || || || || |||||||| | ||| |||||||| || Sbjct 41299920 AAGAAAAACAACCAAGTTTCTTTCCTTCATGTGTATCATCACTGTACGATGTTTACCTTG 41299979 Query 58505 GGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539 | ||| | || ||||||||| ||||||| || || Sbjct 41299980 TGGTGGATTGGAATTAAATGGGTTGCAGGGGGACA 41300014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903380867968960