Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20
2011-11-17] 2,686 sequences; 2,608,588,537 total letters
Query= NC_026141.2
Length=4988
Score E
Sequences producing significant alignments: (Bits) Value
seq67 111 5e-21
seq258 107 6e-20
seq244 104 7e-19
seq8 102 3e-18
seq216 98.7 3e-17
seq213 98.7 3e-17
seq90 98.7 3e-17
seq29 98.7 3e-17
seq1 98.7 3e-17
>seq67
Length=12849963
Score = 111 bits (122), Expect = 5e-21
Identities = 67/71 (94%), Gaps = 0/71 (0%)
Strand=Plus/Minus
Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1223271 ATGGCTGAAGTAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCA 1223212
Query 2826 ACCCCGGGCTT 2836
| ||| || ||
Sbjct 1223211 ATCCCAGGTTT 1223201
>seq258
Length=193273
Score = 107 bits (118), Expect = 6e-20
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826
|||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 76806 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 76865
Query 2827 CCCCGGGCTTCAGC 2840
|||||| ||| ||
Sbjct 76866 TCCCGGGTTTCGGC 76879
>seq244
Length=375362
Score = 104 bits (114), Expect = 7e-19
Identities = 66/72 (92%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 218540 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAATC 218599
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 218600 CCGGGTTTCGGC 218611
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 81084 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 81143
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 81144 CCGGGTTTCGGC 81155
>seq8
Length=45331107
Score = 102 bits (112), Expect = 3e-18
Identities = 65/71 (92%), Gaps = 0/71 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||| |
Sbjct 42277961 GCTGAAATAGCTCAGTTGGAAGAGCATTAGACTGAAGATCTAAAGGTCCTTGGTTCAATC 42278020
Query 2829 CCGGGCTTCAG 2839
|| || |||||
Sbjct 42278021 CCAGGTTTCAG 42278031
>seq216
Length=938135
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 605168 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 605109
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 605108 CCGGGTTTCGGC 605097
>seq213
Length=973467
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| | |
Sbjct 715930 GCTGAAATAGCTCAGTTGGGAGAGCATTAGACTGAAGATCGAAAGGTCCCTGGTTCGATC 715871
Query 2829 CCGGGCTTCAGC 2840
||| | ||| ||
Sbjct 715870 CCGAGTTTCTGC 715859
>seq90
Length=9212255
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 7729507 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 7729566
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 7729567 CCGGGTTTCGGC 7729578
>seq29
Length=23066823
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 4257658 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 4257599
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 4257598 CCGGGTTTCGGC 4257587
>seq1
Length=72162052
Score = 98.7 bits (108), Expect = 3e-17
Identities = 65/72 (90%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828
|| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | |
Sbjct 53251046 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 53250987
Query 2829 CCGGGCTTCAGC 2840
||||| ||| ||
Sbjct 53250986 CCGGGTTTCGGC 53250975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 15849134368470
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |