Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20 2011-11-17] 2,686 sequences; 2,608,588,537 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq134 120 3e-22 seq38 114 1e-20 seq33 111 1e-19 seq6 107 2e-18 seq52 105 6e-18 seq85 102 7e-17 seq71 102 7e-17 seq218 98.7 9e-16 seq116 96.9 3e-15 seq77 95.1 1e-14 seq4 93.3 4e-14 seq102 91.5 1e-13 seq1 91.5 1e-13 seq59 87.8 2e-12 seq54 87.8 2e-12 seq14 87.8 2e-12 seq79 84.2 2e-11 seq8 84.2 2e-11 seq48 82.4 7e-11 seq29 82.4 7e-11 >seq134 Length=5851302 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| | ||| |||||| ||||||||||| || | | Sbjct 3733386 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 3733327 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| |||| | ||||| || | |||| Sbjct 3733326 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 3733267 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | || | | ||| || | ||| ||| Sbjct 3733266 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCTGAGGGTTCAACC 3733207 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| || || ||||| | |||||||| || ||||||||| || Sbjct 3733206 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 3733156 >seq38 Length=19171412 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||||| | |||||||| | ||| | ||| |||||| ||||||||||| || | | Sbjct 14820516 CCACCACAAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 14820575 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| |||| | ||||| || | |||| Sbjct 14820576 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 14820635 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | || | | ||| || | ||| ||| Sbjct 14820636 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCTGAGGGTTCAACC 14820695 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| || || ||||| | |||||||| || ||||||||| || Sbjct 14820696 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 14820746 >seq33 Length=21137282 Score = 111 bits (122), Expect = 1e-19 Identities = 142/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| || | | || | | || ||||||||||| || ||||| Sbjct 15373721 CTCTTTCTGGATGTTGTAGTCAGAAAGAGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAA 15373662 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| | ||| | || ||||| ||| |||||| ||||| | | Sbjct 15373661 GATGAGCCTCTGCTGGTCGGGAGGGATGCCTTCCTTATCCTGGATCTTGGCCTTCACATT 15373602 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || | |||||||||| |||||| || || || |||| || ||||| Sbjct 15373601 TTCGATGGTGTCACTGGGCTCCACCTCCAGCGTGATGGTCTTGCCGGTCAGGGTCTTCAC 15373542 Query 35725 AAATATCTGCATTCTG 35740 || ||||||||| || Sbjct 15373541 GAAGATCTGCATTTTG 15373526 >seq6 Length=49021937 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| || | || ||| | | | || ||||||||||| || ||||| Sbjct 37593726 CTCTTTCTGGATGTTGTAGTCAGACAGGGTGCACCCATCTTCCAGCTGCTTTCCGGCAAA 37593667 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||||| | ||||||| | | | | || |||| |||| ||||||| ||| | | Sbjct 37593666 GATCAACCTCCGCTGGTCAGGAAGGATGCCTTCCTGGTCCTGGATCTTTGCCTTGACGTT 37593607 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || ||||| | ||||| || ||||| |||| || ||||| Sbjct 37593606 CTCAATGGTGTCACTGGGCTCAACCTCAAGGGTGATGGTCTTACCAGTCAGGGTCTTCAC 37593547 Query 35725 AAATATCTGCAT 35736 ||||||||||| Sbjct 37593546 TAATATCTGCAT 37593535 >seq52 Length=16356641 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 35525 AACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCG 35584 ||||| | ||| | ||| |||||| ||||||||||| || | ||| || || | || Sbjct 10619087 AACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAAAGTACGTCCATCT 10619028 Query 35585 TCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCC 35644 ||||| ||||| || ||||| |||| | ||||| || | ||||| | ||||| ||| Sbjct 10619027 TCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGCTCAGGAGGAATTCCTTCCTTATCC 10618968 Query 35645 ATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTT 35704 |||||| ||| | | || | | ||| || | ||| ||||| | ||||| || Sbjct 10618967 TGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGTC 10618908 Query 35705 TTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || ||||| | |||||||| || ||||||||| || Sbjct 10618907 TTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 10618872 >seq85 Length=9676098 Score = 102 bits (112), Expect = 7e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||| | | |||||||| | ||| | ||| |||||||||||||||||| || | | Sbjct 5982655 CCACCATGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 5982596 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || ||| ||||| | ||| || ||||| ||| | ||||| || | |||| Sbjct 5982595 AAAGTACGTCTGTCTTCCAGTTACTTGCCAGCAAAGATCCGTCTTTGCTGATCAGGAGGA 5982536 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | || | ||| || | ||| ||| Sbjct 5982535 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTCGTATCCGAGGGTTCAACC 5982476 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| || || || || | |||||||| || ||||||||| || Sbjct 5982475 TCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTTG 5982425 >seq71 Length=11673789 Score = 102 bits (112), Expect = 7e-17 Identities = 140/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| || | | || || | || ||||||||||| || ||||| Sbjct 72264 CTCTTTCTGGATGTTGTAGTCAGGAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 72205 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | || ||||||||| || | || ||||| ||| |||||| ||| | | | Sbjct 72204 GATGAGCCTCTGCTGGTCGTGGGGGATGCCTTCCTTATCCTGGATCTTGGCCTTGACATT 72145 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| || | |||||||||| ||||| || || || |||| || ||||| Sbjct 72144 TTCGATGGTGTCACTAGGCTCCACCTCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCAC 72085 Query 35725 AAATATCTGCATTCTG 35740 ||| ||||||||| || Sbjct 72084 AAAGATCTGCATTTTG 72069 >seq218 Length=888862 Score = 98.7 bits (108), Expect = 9e-16 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| | ||| |||||| ||||||||||| || | | Sbjct 160565 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 160624 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| || | ||||| || | |||| Sbjct 160625 AAAGTACGTCCCTCTTCCAGTTGCTTGCCAGCAAAGAT--GTCTTTGCTGATCAGGAGGA 160682 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | || | | | | || | ||| ||| Sbjct 160683 ATTCCTTCCTTATCCTGGATCTTGACCTTTACATTTTCTATCCTATCCGAGGGTTCAACC 160742 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| || || ||| | | |||||||| || ||||||||| || Sbjct 160743 TCAAGGGTGATGGTCTTCCCCTTAAGGGTTTTCACGAAAATCTGCATTTTG 160793 Score = 89.7 bits (98), Expect = 5e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| | ||| || ||| ||||||||||| || | | Sbjct 683674 CCACCACGAAGTCTCAACACAAGATGAAGAGTAGACTTCTTCTGAATGTTGTAGTCAGAC 683733 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || | | || ||||| ||||| || ||||| |||| | ||||| || | |||| Sbjct 683734 AAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 683793 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | || | | | | || ||| || Sbjct 683794 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATCCAG-CG-----TTCAGCC 683847 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| || || ||| | | |||||||| || ||||||||| || Sbjct 683848 TCGAAGGTGATGGTCTTCCCCTTAAGGGTTTTCACGAAAATCTGCATTTTG 683898 >seq116 Length=6990774 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| |||||||| | ||| || || |||||||||||||||||| || | | Sbjct 541731 CCACCACGACTTCTCAACACAAGATGAAAAATAGACTCCTTTTGAATGTTGTAGTCAGAC 541672 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || | | || ||||| ||||| || ||||| |||| | ||||| || | |||| Sbjct 541671 AAAGTACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 541612 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | || | | || || | ||| || Sbjct 541611 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACGTTTTCTATTGTATCCGAAGGTTCAGCC 541552 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 | | ||||| || || ||| | | ||||||||||| ||||||||| || Sbjct 541551 TTGAGGGTGATGGTCTTCCCCATAAGGGTTTTCACAAAAATCTGCATTTTG 541501 >seq77 Length=10698663 Score = 95.1 bits (104), Expect = 1e-14 Identities = 114/155 (74%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 35582 TCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTG 35641 || ||||||||||| || ||||| || | || ||||||||| | || | || ||||| Sbjct 10127808 TCTTCCAGCTGCTTGCCGGCAAAGATGAGCCTCTGCTGGTCGGGGGGGATGCCTTCCTTA 10127749 Query 35642 TCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATC 35701 ||| |||||| ||||| | || | | ||||| || | |||||||||| ||||| Sbjct 10127748 TCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATG 10127689 Query 35702 GTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || || |||| || ||||| || |||||||| Sbjct 10127688 GTCTTGCCTGTCAGGGTCTTCACGAAGATCTGCAT 10127654 >seq4 Length=54856640 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||| ||| | ||| | ||| |||||| ||||||||||| || | | Sbjct 17517736 CCACCACGAAGTCTCAGCACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 17517677 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| |||| ||||| || | |||| Sbjct 17517676 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTGTTTGCTGATCAGGAGGA 17517617 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | |||| ||| |||||| ||| | | || | | ||| || | ||| || Sbjct 17517616 ATTTCTTCCTCATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAGCC 17517557 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| || || ||||| | ||||||| || ||||||||| || Sbjct 17517556 TCGAGAGTGATAGTCTTCCCCGTAAGGATTTTCACGAAAATCTGCATTTTG 17517506 >seq102 Length=8035806 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| |||||||||| || | ||| |||||||||||||||||| | | Sbjct 179606 CCACCACGAGGTCTCAACACCAGGTGAAGTGTAGACTCCTTTTGAATGTTGTA----GTC 179551 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| |||| | ||||| || | |||| Sbjct 179550 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 179491 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || ||||| || ||| | ||| | | || | | | | || | ||| || Sbjct 179490 ATTCTTTCCTTATCATGGATTGTGGCCTTTACATTTTCTATCTTATCTGAGGGTTCAACT 179431 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| || || ||||| | |||||||| || ||||||||| || Sbjct 179430 TCGAGGGTGATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 179380 >seq1 Length=72162052 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 5/230 (2%) Strand=Plus/Minus Query 35511 CACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCA 35570 |||||| | |||||||| | ||| | || |||||||||||||||| | || | || Sbjct 59420579 CACCACAAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGCAGTCAGACA 59420520 Query 35571 AGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAA 35630 | || || | || ||||||||||| || ||||| |||| | |||||| ||||| Sbjct 59420519 AAGTACGTCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGTCTTTGCTGG-----AGGAA 59420465 Query 35631 CGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCT 35690 || |||| ||| |||||| ||| | | || | ||| || | ||| |||| Sbjct 59420464 TTCTTTCCTGATCCTGGATCTTGGCCTTTACATTTTCTGTCGTATCCAAGGGTTCAACCT 59420405 Query 35691 CCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || ||||| || || | || | |||||||| || ||||||||| || Sbjct 59420404 TCAGGGTGATGGTCTTCCTTGTTAGGGTTTTCACGAAAATCTGCATTTTG 59420355 >seq59 Length=14671897 Score = 87.8 bits (96), Expect = 2e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | | | | ||| | || |||||||| || | ||||| Sbjct 11745089 CTCCTTCTGAATGTTGTAGTCAGATAGGTTGCGCCCATCTTCCAGCTGTTTCCTGGCAAA 11745030 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| | ||| ||||| | ||| | || |||||||| ||||||| ||| | | Sbjct 11745029 GATCAATCTCTGTTGGTCAGGAGGGATGCCTTCCTTGTCTTGGATCTTTGCCTTGACGTT 11744970 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | ||||| || | || ||||| | ||||| || |||| |||| ||| |||| Sbjct 11744969 CTTAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGGTCTTACTGGTCAGAGTCTTCAG 11744910 Query 35725 AAATATCT 35732 ||| |||| Sbjct 11744909 AAAGATCT 11744902 >seq54 Length=16265076 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||| | | |||||||| | ||| | ||| |||||| ||||||||||| || | | Sbjct 5606999 CCACCATGGAGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGAC 5607058 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || | | | || ||||| ||||| || ||||| |||| | ||||| || | |||| Sbjct 5607059 AAAATACATCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGA 5607118 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || ||||| ||| ||||| ||| | | || | || || | ||| || Sbjct 5607119 ATGCCTTCCTTATCCTGAATCTTGGCCTTTACATTTTCTGTAGTATCCGAGGGTTCAGCC 5607178 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 || | ||||| || || || || | ||||||||||| |||||| || Sbjct 5607179 TCGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACAAAAATCTGCTTT 5607226 >seq14 Length=37227512 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/231 (69%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||| | | ||| |||| | ||| | || |||||||||||||||||| || Sbjct 27607775 CCACCATGAAGTCTCGACACAAGATGAAGACTAGACTCCTTTTGAATGTTGTAGTCA--- 27607831 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||| | || || ||||| ||||| || ||||| |||| | | ||| || | |||| Sbjct 27607832 AAGTATGTCTA-TCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTCCTGATCAGGAGGA 27607890 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | | || | ||||||| | ||| ||| Sbjct 27607891 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTGTCGTGTCGGAGGGTTCAACC 27607950 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| | || ||| | | ||||||||||| ||||||||| || Sbjct 27607951 TCAAGGGTGATGATCTTCCCCATGAGGGTTTTCACAAAAATCTGCATTTTG 27608001 >seq79 Length=10412959 Score = 84.2 bits (92), Expect = 2e-11 Identities = 140/203 (69%), Gaps = 7/203 (3%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| || | | || || | || ||||||||||| || ||||| Sbjct 108398 CTCTTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAA 108339 Query 35605 TATCAACCGCTGCTGGTC-------CGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCT 35657 || | || |||||| || | |||| || ||||| ||| |||||| || Sbjct 108338 GATGAGCCTCTGCTGATCGGGGAGAGGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCT 108279 Query 35658 TCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAG 35717 ||| | || | | ||||| || | ||||| |||| ||||| || || || |||| | Sbjct 108278 TCACATTTTCGATGGTGTCACTGGGCTCCACTTCCAGGGTGATGGTCTTGCCGGTCATGG 108219 Query 35718 TTTTCACAAATATCTGCATTCTG 35740 | ||| |||| ||||||||| || Sbjct 108218 TCTTCGCAAAGATCTGCATTTTG 108196 >seq8 Length=45331107 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||| | | |||||||||| ||| | ||| |||||||||||||||||| || | | Sbjct 31945666 CCACCATGAAGTCTCAACACCAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 31945607 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | || || | || || || ||||| || ||| | ||||| | ||||| || | |||| Sbjct 31945606 AGAGTACGTCCATCTTCTAGTTGCTTGCCAGCATAGATCAATCTTTGCTGATCAGGAGGA 31945547 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||||| ||| | || | ||| || | ||| ||| Sbjct 31945546 ATTCCTTCCTTATCCTGGATCTTGGCCTTTACGTTTTCTTTCGTATCTGAGGGTTCAACC 31945487 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 | | ||||| || || |||| | ||||| || ||||||||| || Sbjct 31945486 TGGAGGGTGATAGTCTTCTCCGTAAGAGTTTGTGTGAAAATCTGCATTTTG 31945436 >seq48 Length=16679805 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||| | | |||||||| | ||| | ||| |||||||||||||||||| || | | Sbjct 11416469 CCACCAGGAAGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGAC 11416528 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || | | | ||||| ||||| || ||||| |||| || ||||| || | |||| Sbjct 11416529 AAAGTACATCCACCTTCCAGTTGCTTGCCAGCAAAGATCAGCCTTTGCTGATCAGGAGGA 11416588 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | | ||||| ||| ||| || || || | | || | | | || | ||| || Sbjct 11416589 ATTCCTTCCTTATCCTGGAT-TTCAGCTTTTACACTTTCTGTCATATCCAGGGTTTCAAC 11416647 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 || | ||||| || || || || | ||||||||||| || ||| || Sbjct 11416648 CTTGAGGGTGATGGTCTTCCCTGTAAGGGTTTTCACAAAAATGTGCTTT 11416696 >seq29 Length=23066823 Score = 82.4 bits (90), Expect = 7e-11 Identities = 157/231 (68%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| || |||||||| | ||| | ||| |||||| ||||||||||| | | Sbjct 6881220 CCACCACGAAATCTCAACACAAGATGAAGTGTAGACTCCTTCTGAATGTTGTA----GTC 6881165 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 || || || | || ||||| ||||| || ||||| |||| ||||| | | |||| Sbjct 6881164 AAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTTTTTGCTGAACAGGAGGA 6881105 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | ||||| ||| |||| | ||| | | || | | ||| | | ||| ||| Sbjct 6881104 ATTCCTTCCTTATCCTGGATCCTGGCCTTTATATTTTCTATCGTAACCAAGGGTTCAACC 6881045 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | |||| || || ||| | | ||||||| || ||||||||| || Sbjct 6881044 TCGAGGGTGACGGTCTTCCCCATAAGGGTTTTCATGAAAATCTGCATTTTG 6880994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450778464604880