Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20 2011-11-17] 2,686 sequences; 2,608,588,537 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq33 105 7e-18 seq134 102 8e-17 seq38 102 8e-17 seq85 98.7 1e-15 seq102 96.9 4e-15 seq9 96.9 4e-15 seq77 93.3 4e-14 seq59 91.5 1e-13 seq52 91.5 1e-13 seq11 89.7 5e-13 seq71 87.8 2e-12 seq132 86.0 6e-12 seq141 82.4 8e-11 >seq33 Length=21137282 Score = 105 bits (116), Expect = 7e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| || |||| || ||||| || || || || || || ||||||||||| | Sbjct 15373756 CCGCCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAA 15373697 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||||| || || ||||| ||||||||||| || | | |||||| ||||| || Sbjct 15373696 AGAGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 15373637 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || || || || | ||||| | ||||| Sbjct 15373636 ATGCCTTCCTTATCCTGGATCTTGGCCTTCACATTTTCGATGGTGTCACTGGGCTCCACC 15373577 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || ||||| || ||||| | || || ||||| || ||||||||| Sbjct 15373576 TCCAGCGTGATGGTCTTGCCGGTCAGGGTCTTCACGAAGATCTGCATTTTG 15373526 >seq134 Length=5851302 Score = 102 bits (112), Expect = 8e-17 Identities = 158/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 |||| |||||| || || || || || ||||| |||||||||||||| | ||| || | Sbjct 3733377 AGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAA-AGTACG 3733319 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || || || ||||| ||||| |||| | |||||||| || || || ||||| Sbjct 3733318 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTC 3733259 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || || || || | || || || | ||| || ||||| || Sbjct 3733258 CTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCTGAGGGTTCAACCTCGAGGGT 3733199 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || || || | ||||| |||||||| ||||||||| Sbjct 3733198 GATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 3733156 >seq38 Length=19171412 Score = 102 bits (112), Expect = 8e-17 Identities = 158/223 (71%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 |||| |||||| || || || || || ||||| |||||||||||||| | ||| || | Sbjct 14820525 AGTCTCAACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAA-AGTACG 14820583 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 || || || || ||||| ||||| |||| | |||||||| || || || ||||| Sbjct 14820584 TCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTC 14820643 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || || || || | || || || | ||| || ||||| || Sbjct 14820644 CTTATCCTGGATCTTGGCCTTTACATTTTCTATCGTATCTGAGGGTTCAACCTCGAGGGT 14820703 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || || || | ||||| |||||||| ||||||||| Sbjct 14820704 GATGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 14820746 >seq85 Length=9676098 Score = 98.7 bits (108), Expect = 1e-15 Identities = 157/223 (70%), Gaps = 2/223 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTG 134554 |||| |||||| || || || || || |||||||||||||||||||| | ||| || | Sbjct 5982646 AGTCTCAACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAGTCAGACAA-AGTACG 5982588 Query 134555 AGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTC 134614 ||| || || | ||||| ||||| ||| | |||||||| || || || ||||| Sbjct 5982587 TCTGTCTTCCAGTTACTTGCCAGCAAAGATCCGTCTTTGCTGATCAGGAGGAATTCCTTC 5982528 Query 134615 TTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGT 134674 || || || || || || || || || || || | ||| || ||||| || Sbjct 5982527 CTTATCCTGGATCTTGGCCTTTACATTTTCTGTCGTATCCGAGGGTTCAACCTCGAGGGT 5982468 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 ||||| || || || | ||||| |||||||| ||||||||| Sbjct 5982467 GATGGTCTTCCCTGTAAGGGTTTTCACGAAAATCTGCATTTTG 5982425 >seq102 Length=8035806 Score = 96.9 bits (106), Expect = 4e-15 Identities = 154/221 (70%), Gaps = 4/221 (2%) Strand=Plus/Minus Query 134497 GTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAG 134556 ||| |||||| ||||| || || || |||||||||||||||||||| | || | Sbjct 179596 GTCTCAACACCAGGTGAAGTGTAGACTCCTTTTGAATGTTGTAGTC----AAAGTACGTC 179541 Query 134557 AGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTT 134616 || || || || ||||| ||||| |||| | |||||||| || || || | ||| | Sbjct 179540 CATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCTTTCCT 179481 Query 134617 TTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAA 134676 | || || ||| | || || || | | || || | ||| || ||||| || | Sbjct 179480 TATCATGGATTGTGGCCTTTACATTTTCTATCTTATCTGAGGGTTCAACTTCGAGGGTGA 179421 Query 134677 TGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 |||| || || || | ||||| |||||||| ||||||||| Sbjct 179420 TGGTCTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 179380 >seq9 Length=44311105 Score = 96.9 bits (106), Expect = 4e-15 Identities = 113/152 (74%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| || |||| ||| ||||| || ||||| ||||| || ||||||||||| Sbjct 14505871 CCACCTCGCAGGCGCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCTG-- 14505814 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||||||||| ||||| |||| || |||||| || | || Sbjct 14505813 AGCGTGCGGCCATCCTCCAGCTGTTTGCCGGCAAATATCAGACACTGCTGGTCAAGTGGG 14505754 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGAC 134638 || ||||| || ||||||||||| |||||| Sbjct 14505753 ATACCTTCCTTGTCTTGAATTTTGGCTTTGAC 14505722 Score = 89.7 bits (98), Expect = 5e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| || |||| ||| ||||| || ||||| || || |||||||||||||| Sbjct 3708446 CCACCTCACAGGCGCAGCACTAGGTGCAGGGTGGACTCTTTCTGAATGTTGTAGTCTGAG 3708387 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| || || |||||||| || ||||| |||| || |||||| || || || Sbjct 3708386 AGTGTGCCGCCATCCTCCAGCTGTTTACCGGCAAATATCAGACACTGCTGGTCAGGTGGG 3708327 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGAC 134638 || || || || ||||||||||| |||||| Sbjct 3708326 ATACCCTCCTTGTCTTGAATTTTGGCTTTGAC 3708295 Score = 89.7 bits (98), Expect = 5e-13 Identities = 151/218 (69%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || |||| ||| ||||| || ||||| || || || |||||||| || | ||| | Sbjct 19097344 AGGCGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTATTCTG--AGCGTGAGG 19097287 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || |||||||||| ||||| |||| ||||||||| || || || || || || Sbjct 19097286 CCATCCTCCAGCTGTTTGCTGGCAAATATCAGACGCTGCTGGTCAGGTGGGATACCCTCC 19097227 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || ||||||||||| |||||| || | ||||| | || || || || || Sbjct 19097226 TTGTCTTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTG 19097167 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || | || || || || || ||||| Sbjct 19097166 ATGGTCTTGCCCGTGAGGGTCTTCACAAAGATCTGCAT 19097129 >seq77 Length=10698663 Score = 93.3 bits (102), Expect = 4e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| || |||| || ||||| || || || || || || ||||||||||| | Sbjct 10127652 CCGCCTCTCAGACGCAGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAGTCAGAA 10127593 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||||| || || ||||| ||||||||||| || | | |||||| ||||| || Sbjct 10127592 AGAGTGTGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGGGAGGG 10127533 Query 134607 ATGCCTTCTTTTTCTTGAA 134625 |||||||| || ||||||| Sbjct 10127532 ATGCCTTCCTTATCTTGAA 10127514 >seq59 Length=14671897 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558 |||| || | ||| || |||| || || || ||||||||||| | |||| | Sbjct 11745340 CGCAGGACCAAGTGCAGAATGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCA 11745281 Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || |||||||| || ||||| ||||| | |||||| || || || |||||||| || Sbjct 11745280 TCTTCCAGCTGTTTCCCGGCAAAGATCAATCTCTGCTGGTCAGGAGGGATGCCTTCCTTG 11745221 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 ||||| || ||| ||||| || | ||||| | || || || || || ||| Sbjct 11745220 TCTTGGATCTTTGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATG 11745161 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || |||| ||| | || || ||||| || ||||| Sbjct 11745160 GTCTTACTGGTAAGGGTCTTCACGAAGATCTGCAT 11745126 Score = 87.8 bits (96), Expect = 2e-12 Identities = 150/215 (70%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| ||| || | | |||||| || ||||| ||||| |||||||||||||| Sbjct 11745124 CCACCTCGGAGACGGAGGATGAGGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAT 11745065 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | | || | || || |||||||| | ||||| ||||| | ||| || || || || Sbjct 11745064 AGGTTGCGCCCATCTTCCAGCTGTTTCCTGGCAAAGATCAATCTCTGTTGGTCAGGAGGG 11745005 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCC--AAT-GTGTCGGACGATTCC 134663 |||||||| || ||||| || ||| |||| ||| | ||| ||||| | || Sbjct 11745004 ATGCCTTCCTTGTCTTGGATCTTTGCCTTGA---CGTTCTTAATGGTGTCACTGGGCTCG 11744948 Query 134664 ACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTT 134698 || || || || ||||| |||| ||| | ||| || Sbjct 11744947 ACCTCAAGGGTGATGGTCTTACTGGTCAGAGTCTT 11744913 >seq52 Length=16356641 Score = 91.5 bits (100), Expect = 1e-13 Identities = 152/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 134502 AACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTC 134560 ||||| || || || || || ||||| |||||||||||||| | ||| || | || Sbjct 10619087 AACACAAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCAGACAA-AGTACGTCCATC 10619029 Query 134561 GTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTC 134620 || || || ||||| ||||| |||| | ||||| || || || || ||||| || || Sbjct 10619028 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGCTCAGGAGGAATTCCTTCCTTATC 10618969 Query 134621 TTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGT 134680 || || || || || || | || || || | ||| || ||||| || ||||| Sbjct 10618968 CTGGATCTTGGCCTTTACATTTTCTATCGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 10618909 Query 134681 TTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || | ||||| |||||||| ||||||||| Sbjct 10618908 CTTCCCCGTAAGGGTTTTCACGAAAATCTGCATTTTG 10618872 >seq11 Length=43820709 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| || ||| ||| ||||| || ||||| || || || ||||||| ||| Sbjct 25320731 CCACCTCGCAGGTGCAGCACCAGGTGCAGGGTGGACTCTTTCTGGATGTTGTTGTCTGAG 25320790 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||||||||| ||||| |||| ||||||||| || || || Sbjct 25320791 AGCGTGCGGCCATCCTCCAGCTGTTTGCCGGCAAATATCAGACGCTGCTGGTCAGGTGGG 25320850 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || | || ||||||||||| |||||| || | ||||| | || || Sbjct 25320851 ATACCCTTCTTGTCTTGAATTTTGGCTTTGACATTCTCAATGGTGTCACTGGGCTCGACC 25320910 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || | || || || || || ||||| Sbjct 25320911 TCAAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACAAAGATCTGCAT 25320957 >seq71 Length=11673789 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || || || |||| || |||| || || || || || || ||||||||||| | Sbjct 72299 CCACCCCTCAGACGCAGGACCAGGTACAGGGTTGACTCTTTCTGGATGTTGTAGTCAGGA 72240 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || || ||||| ||||||||||| || | | |||||| ||| | || Sbjct 72239 AGAGTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCGTGGGGG 72180 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || ||||| || | ||||| | ||||| Sbjct 72179 ATGCCTTCCTTATCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCACTAGGCTCCACC 72120 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || ||||| || ||||| | || || || || || ||||||||| Sbjct 72119 TCCAGGGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATTTTG 72069 >seq132 Length=5918258 Score = 86.0 bits (94), Expect = 6e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 21436 ACCCGTCTTTCAAAGAAATTTGTTTTTCCTTCTAGTGCAATGTTTTTCATAAAATTAAAA 21495 || ||| | |||||||||||||||||||||||||| | |||||||| |||||||| |||| Sbjct 989905 ACTCGTTTCTCAAAGAAATTTGTTTTTCCTTCTAGAGAAATGTTTTCCATAAAATCAAAA 989846 Query 21496 GGATT 21500 ||||| Sbjct 989845 GGATT 989841 >seq141 Length=4680182 Score = 82.4 bits (90), Expect = 8e-11 Identities = 132/190 (69%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 134500 GCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGT 134559 ||| ||| ||||| || | ||||| || || |||||| |||| | ||||| | Sbjct 4589921 GCAGCACCAGGTGCAGGGCGGATTGTTTCTGGATGTTGCAGTCTGAGAGAGTGTGTCCAT 4589862 Query 134560 CGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTT 134619 | || || |||||||| |||| |||| | ||||||| || || || || || || || | Sbjct 4589861 CCTCCAGTTGTTTGCCAGCAAGGATCAGATGCTGCTGGTCAGGTGGGATACCCTCCTTGT 4589802 Query 134620 CTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGG 134679 |||||||||| |||||| | || | ||||| | || || || || || |||| Sbjct 4589801 CTTGAATTTTGGCTTTGACAGTCTCAATGGTGTCACTGGGCTCGACCTCAAGGGTGATGG 4589742 Query 134680 TTTTACCGGT 134689 | ||||| || Sbjct 4589741 TCTTACCTGT 4589732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505381431248720