Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saimiri_20boliviensis_20boliviensis_20[refseq_20GCF_5F000235385.1_20 2011-11-17] 2,686 sequences; 2,608,588,537 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq37 363 2e-95 seq5 293 3e-74 seq111 181 1e-40 seq9 114 2e-20 seq132 111 2e-19 seq1056 105 9e-18 seq3 87.8 2e-12 >seq37 Length=19344684 Score = 363 bits (402), Expect = 2e-95 Identities = 646/936 (69%), Gaps = 10/936 (1%) Strand=Plus/Plus Query 39270 TTTAAAAGTCAACATCTAAAGAAAAATGATTATCTTCTTG---TGACATAACTCCCATTT 39326 |||| |||||| || | || | |||| ||| ||| | | |||||| |||||||| Sbjct 211257 TTTAGAAGTCAGCACCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCCATCC 211316 Query 39327 TTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTT 39386 | || || | ||| || | ||||| || || ||||| || ||||||| ||| ||||| | Sbjct 211317 TCTGATACTTACCTACTCTCTTCTCAAAGAAGTTAGTGTTTCCTTCCAGTGAAATATTCT 211376 Query 39387 CCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATCA 39446 |||| || ||||| ||||| | | | | | |||| || | ||| || | Sbjct 211377 CCATAAAGTCAAATGGATTCTCTACTCTGAAAACCCTGCTAAAACCCAGTTCCAGCATAA 211436 Query 39447 ATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATGAGTT 39506 ||| ||||| ||||| || |||||| ||||| | |||||||| || ||||| | Sbjct 211437 GTCTGTCTGCCACAAACTCAATGTATTGCTTCATTAGAGTGCAATTCATCCCAATGAGCT 211496 Query 39507 TAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTA-TTATC 39565 | || || | ||||| || || ||||| | ||| || || || ||| || |||| Sbjct 211497 TCACAGGCAAGGCCTCAGTAAGGAACTCCTGTTCCATCCGAACAGCA-CTGATAATTATT 211555 Query 39566 GATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCGAAG 39625 | ||||| ||| || ||| || | | ||||| ||||| | ||| ||||| Sbjct 211556 TCTCTTACTCTCTCCTCTGATGGTTTGTGTACTTGGTGTTTGAACATCAGGCAAGCGAAA 211615 Query 39626 TCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATT 39685 ||||| |||| ||||||||||| | | | | ||| |||||||||||||| |||||||| Sbjct 211616 TCACAGTGTAAACCCTCATCTCTGCCAGTAAGTTCATTAGAAAATGTGAGGCCAGGCATC 211675 Query 39686 AGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCT 39745 || || || || |||||||| ||||||| |||||||| |||||||||||||||||||| Sbjct 211676 AGTCCTCGTTTCTTGAGCCAGAATATGGATGCAAAAGAACCAGAAAAGAAGATGCCTTCC 211735 Query 39746 ACTGCTGCAAATGCAACAA-GTCTCTCTCCGTAACTTGTATCATTAT---GTATCCACTT 39801 ||||| ||||| || ||| || | || || || | | || || | | ||| Sbjct 211736 ACTGCAGCAAAGGCTGCAACGTGT-TCACCATAGGTAGCCTCTTTGTCCCCAACCCAGAG 211794 Query 39802 CTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGATA 39861 | |||||||| || |||||||| ||||||||||| ||||| |||||||| |||||| | Sbjct 211795 CAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATCGTTTCAATAGCATTGAAGAGAAA 211854 Query 39862 ATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGAATG 39921 | |||| | |||||| | || || || || | |||||||| ||||| ||||| Sbjct 211855 TTCCCTTTCGTTGGGATCTTTTATGTAAGTGTCAATAAGGAGACTATATATTTCAGAATG 211914 Query 39922 GATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTACCTC 39981 ||||||| || ||||| || || || || ||||| ||||| || || || || || Sbjct 211915 TATGTTTTTCATGGCCATTTGGAAGCCATAGAAACAGTGGGCTTCTGTGATCTGAACTTC 211974 Query 39982 TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAAAATGC 40041 | | ||||| ||| |||| |||||||| ||||| |||| ||| || ||||| || || Sbjct 211975 TTGGCTAAATCGCTCCACCAAGTTTTCATTTACTATGCCATAACTTGCTGCAAAGAAAGC 212034 Query 40042 CAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAATTTATTCCAGTCATTGATATC 40101 || || || ||||| ||| | | ||||| ||| | ||||| | || Sbjct 212035 CAGAACGTGGGATATAAAGTATCTCCCCTCGGGCTTCAGGGATTCCCAGTGCCAAACGTC 212094 Query 40102 TTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTGTACATGTT 40161 || || | || || || | | ||||| || || ||||| |||| || || | | Sbjct 212095 CTTGGACAGGTCCACCTCCTTGGTGGTCCAGAAGGAGGCCTCCCCCTTCTTATATGTCTG 212154 Query 40162 CCATATATCACGATATTGTATTGGAAAAATAACAAA 40197 ||| ||||| | || | || || || || ||||| Sbjct 212155 CCAGATATCGGGGTACTCGATGGGGAATATGACAAA 212190 >seq5 Length=50794693 Score = 293 bits (324), Expect = 3e-74 Identities = 671/999 (67%), Gaps = 26/999 (3%) Strand=Plus/Minus Query 69593 TAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTAT 69652 ||| || |||||| || ||||| ||||||||||||| | ||||| ||||||| | Sbjct 46265809 TAAGTCATTTCATGAAGAGATCTAGAATCCAAAGAGCAAAAAAGA--TCTCTGGCATGCT 46265752 Query 69653 TTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATG 69712 ||||| |||||| |||| || || | ||| | || || | || || |||| || | Sbjct 46265751 GTTCTTTCTTTCCTATATTCTTCTTTAAATCAAACAATTCAAAGATGTCTAAATGTCAAG 46265692 Query 69713 GTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGG 69772 | || || || || || | |||| || | || || || || |||| | |||| | Sbjct 46265691 GCTCCAGGTAAATAGCAAATGCTCCAGGACCCTTGTTCCCACCTCGATCCAGATATCAAG 46265632 Query 69773 CAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAG 69832 | ||||| ||||| |||||||||||| | || ||||| || || || || | ||| Sbjct 46265631 CTGTGTTGTTATATACTCTCAGCATCAGTGCAAGGCCATTGGAATTGCCCTTAGACCCAT 46265572 Query 69833 AAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTT 69892 ||| || || || | || | |||| ||| | || | ||| |||||||| || || Sbjct 46265571 CAATGTAGCTGCCAGTAGCCCAAATACAACTCAAAGCAACACCAATTCCTCCAGCAGATT 46265512 Query 69893 TAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCA 69952 |||| || | ||||| | || | |||||||| || || || ||||| || ||| ||| Sbjct 46265511 TAGAAATCAACGCACATTGCTTTAGAGTGTCATAAATGCCTTCAATGCTGTCGTCTTTCA 46265452 Query 69953 TGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAG 70012 || | ||||||||||||||||| | ||| | || | || || ||| | || || || | Sbjct 46265451 TGCTCAGAAGAAAACAGCTAGAAAGTTGTGGGTGGTTGGTACCAGCACTGAAGAAAGTTG 46265392 Query 70013 GAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGT---ATGTTTCAATAGCTGATT 70069 | || || ||||| ||||| | |||| ||| ||| ||| ||||||||| ||| | Sbjct 46265391 GTGAAGCATGAGTAAACCACCTCTCAGGAAGAAGACTGTCTGCTGTTTCAATTGCTACAT 46265332 Query 70070 CTATATC-CCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCT 70128 | ||||| | || || || || | | || | ||||||||||| ||| ||| ||| Sbjct 46265331 CAATATCTTCTTTGTTG-ATCCCAACAGATACTCTCATCAACATATACTGTGGTATTTCA 46265273 Query 70129 ACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAG 70188 || ||| ||| || ||||||| || || | || | ||||| ||||| || Sbjct 46265272 GCCACTTTTCCATTGATCTTCAACAAATAAGACAACTGTAGCATCTTAAAACCAAAGTAA 46265213 Query 70189 TTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTATATTTGG-- 70246 ||||| || || ||| | | |||||| ||||||| | | ||| ||| |||| Sbjct 46265212 TTGTAAGAGAAATCTTAGCCACAGATAATAGCAGAATTCAAGTGATCTTTA---TTGGCC 46265156 Query 70247 -TAACTATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTAGGATTA 70305 ||| ||||||| | | | | || ||||| ||||| ||| | ||| | Sbjct 46265155 AAAACAATATCCAGTGCTGACTTGGCCACCATGGGAGAGCGTTTGTCATGATGTGGACTT 46265096 Query 70306 ACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTGTAAA 70365 || |||| | | |||||||| |||||||| || | || |||||||| ||||| || Sbjct 46265095 ACGCAGTTATAGAGGTCTTCCATCACATCACTGAACACTTCATTTGTTTCTTTGTGCAAG 46265036 Query 70366 TTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATGTTGTGTAGTACAAGTA 70425 || || | || | || ||||| || ||||||||| |||| || | ||||| |||| Sbjct 46265035 TTAGAGACAGCAGTCCTAGCTGCCAGGATAGCATAGACAGGGTGCTTAGTAGT-CAAG-- 46264979 Query 70426 GCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTATATAGCCCT 70485 |||| |||| | || |||||| ||| || | || || || | || | | | Sbjct 46264978 GCTG------CCGC--CAAAAATATCTAGTTCCATCATAGTGACCCCACTGTACAAGCAT 46264927 Query 70486 TGAATAACTTTCATGGCTATTTTGATAGGATCTATGAATTCTGTGTTCAGACCATAACAT 70545 || || |||||||||| || | ||||| | || || | || |||||||| Sbjct 46264926 TGGATTACTTTCATGGTGATCTGAGCGGGATCAACAAAATCCACAATGAGGCCATAACA- 46264868 Query 70546 AATTTTCT-AATACGAGATGTAATTTTATCAAACATAAC 70583 || |||| || |||||| ||||||| ||||| || || Sbjct 46264867 AAGCTTCTGGATTCGAGATTTAATTTTGTCAAATATGAC 46264829 >seq111 Length=7367144 Score = 181 bits (200), Expect = 1e-40 Identities = 323/465 (69%), Gaps = 20/465 (4%) Strand=Plus/Plus Query 39616 GCAGGCGAAGTCACAATGTAGGC--------CCTCATCTCTACTAATTAATTCGTTAGAA 39667 ||| || ||||||||||||| | ||||||| || ||||| | ||| || ||| Sbjct 4918117 GCAAGCAAAGTCACAATGTAAACTGTTAAACCCTCATCACTGCTAATAAGTTCATTGGAA 4918176 Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 |||||||| |||| ||| || | | || |||||||| ||||| | |||||||| ||| Sbjct 4918177 AATGTGAGGCCAGACATCAGTCATTGTTTCTTGAGCCAGAATATTGATGCAAAAGAACCA 4918236 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAA---TGCAACAAG-TCTCTCTCCGTAACTTGT 39783 ||| ||||| |||||||||||| ||||| ||||||| | ||||| | ||| | | | Sbjct 4918237 GAAGAGAAGGTGCCTTCTACTGTGGCAAAGGCTGCAACACGTTCTCTGTGGGTAGCATCT 4918296 Query 39784 ATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTC 39843 | || ||||| | |||||||| || | |||||| ||||||||||| |||| Sbjct 4918297 -TTGTTCACAATCCAACACAAGGCCCAATCTGCCTCCTTCTTGACACAAGGCATCCTTTC 4918355 Query 39844 TATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAG 39903 || || || |||||| | | |||| | | |||||||| |||| || | || || Sbjct 4918356 GATGGCGTTGAAGAGAAATTCCCTTTCTTTGTTGTCTTTAAC--ATGTGTCAGTAAAGAG 4918413 Query 39904 ACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGC 39963 | ||| ||| || |||| |||||||| || || || || || || || || || | Sbjct 4918414 ATTATCCATGTCAGAATATATGTTTTCCATAGCAATTTGGAAGCCATAGAAGCA---GGT 4918470 Query 39964 TTCAGTAATTTGTACCTC-TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCAT 40022 ||| ||| ||| || || || || | || ||| |||| |||| || ||||| ||| Sbjct 4918471 TTCTGTAGCTTGAACTTCTTGGAC-ACATTGCTCCACCAAGTTTTTATCAACTATGCCAC 4918529 Query 40023 CACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTT 40067 | || ||||| || | || | ||| ||||||||| ||| Sbjct 4918530 GGCATGCTGCAAAGAAAGTCAGAATATGGGATATAAAATATCTTT 4918574 >seq9 Length=44311105 Score = 114 bits (126), Expect = 2e-20 Identities = 128/171 (75%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 68441 TCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTATATGAATAT 68500 |||| |||||||| ||||||||||| |||||| ||| | || || || || || || | Sbjct 1875011 TCCAGCCGTAGAAGTGCATACTTGTGAGTTTGCCATAGTTAGGCTCAGCAATGTGGATGT 1875070 Query 68501 TCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTATAATACTCT 68560 ||| || || |||||||| |||||||| ||||| || || ||||| || | || | | | Sbjct 1875071 TCAAAGACTGGCTTTGATCAATGAAAGCACCTCTCTCAGCAGCCATCTTGAGAACAGTTT 1875130 Query 68561 TTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAA 68611 | |||| |||||||| | ||| ||| ||| || || | ||||| |||| Sbjct 1875131 TCTGAGAGATTTCCCACACAGTTTTATAAAGTTGCTTCAGGTCATCAGGAA 1875181 Score = 114 bits (126), Expect = 2e-20 Identities = 126/168 (75%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 70334 CACTAAATAGtttttttGTTTCCTTGTGTAAATTTGATATGGCTATTCTGGCTGCTAGAA 70393 |||| || | ||| |||||||| ||||| || || || | ||| || |||||||| || | Sbjct 1910898 CACTGAACACTTTCTTTGTTTCTTTGTGCAAGTTAGAGACGGCAATCCTGGCTGCCAGGA 1910957 Query 70394 TAGCATAGTCAGGATGTTGTGTAGTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTA 70453 |||||||||||||||| | ||||| | || || ||| |||| ||||| || ||||||| Sbjct 1910958 TAGCATAGTCAGGATGCTTAGTAGTCAAGGTTGCAGCTGTTTCAGCAGCCAAAGTATCTA 1911017 Query 70454 ATTCTATAGTTGTAACTCCGTTATATAGCCCTTGAATAACTTTCATGG 70501 ||| | || || || || | || | ||||| || || ||||||| Sbjct 1911018 GTTCCACCGTGGTGACCCCACTGTACAAGCCTTGGATTACCTTCATGG 1911065 Score = 98.7 bits (108), Expect = 1e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 68947 GATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAAT 69006 || || | ||| |||||||| ||||| | || | || || ||||| || || || | Sbjct 1883215 GAGCCCTCATAGGTTTCATATGGTCCATGCTCCTTGGCAAGGTCACAGCTGGCTTCCAGG 1883274 Query 69007 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCG 69066 || ||||||||||| ||||| || |||| |||||| | || |||||| ||| || Sbjct 1883275 GCTCCGTAATAAATAGTTTCAAAGATCTGCTTATTCAATAACTGGGCTTCTGCACTCTCA 1883334 Query 69067 AATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGT 69126 || || || | || ||||| |||||||||| || || |||||||| || || || Sbjct 1883335 AAAGGGTATCTCATCAGGATAAAAGCATCTGCCAGACCTTGTACCCCAATTCCAATGGGG 1883394 Query 69127 CTATGTCTCTTATTTGA 69143 | ||| | |||||||| Sbjct 1883395 CGATGACGTTTATTTGA 1883411 Score = 98.7 bits (108), Expect = 1e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 69595 ACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTT 69654 ||||||||||| || ||||| |||||||||||||| | ||| |||||||||| | | | Sbjct 1896021 ACTCGTTTCATGAAGAGATCCGGAATCCAAAGAGCAAAAAAAAGATCTCTGGCACGCTGT 1896080 Query 69655 TCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGT 69714 ||||| |||||||| || || || | ||| || || || | || || ||||||| || Sbjct 1896081 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGGAATTCAAAGATGTCTAAATGCCAAGGC 1896140 Query 69715 TCTAGATATATCGC 69728 || || || || || Sbjct 1896141 TCCAGGTAAATAGC 1896154 >seq132 Length=5918258 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 39641 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTG 39700 |||||||| || || | ||| || ||||| |||||||| ||||| ||||| | ||| || Sbjct 980250 TCATCTCTGCTGATAAGTTCATTGGAAAAAGTGAGTCCTGGCATAAGACCTCTCTTCTTT 980191 Query 39701 AGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCA 39760 ||||| ||||| |||||||||||||| || ||||| | |||||||| || || || || Sbjct 980190 AGCCAGAATATAGCAGCAAAAGATCCTGAGAAGAAAACTCCTTCTACAGCAGCGAAGGCC 980131 Query 39761 ACAAGTCTCTCTCC 39774 || | ||| || || Sbjct 980130 ACCACTCTTTCCCC 980117 >seq1056 Length=1934 Score = 105 bits (116), Expect = 9e-18 Identities = 239/355 (67%), Gaps = 7/355 (2%) Strand=Plus/Plus Query 37348 CCTGTTGATCCAAACCCTTGAGCTCCTCTATCTGTACCATCTAGAGATTGTACTTCATTC 37407 || || || ||||| ||| | || || || || |||| | || ||| ||||| | Sbjct 686 CCAGTGGAACCAAAACCTCCTGAACCCCTTTCGGTGTCATCCAAAGCTTGAACTTCTTCT 745 Query 37408 AGATCAGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCGCCCGTATTTATT 37467 | || || ||| | || |||| | | || ||||| || |||| ||| | | || | | Sbjct 746 ATTTCTGGGTAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGATCCCTTTTTTTGACT 805 Query 37468 TTAAAATTACATTTTCCATTATTTATCAGAATGACTCCAATATTCCCCCTATAATCTTCA 37527 | ||| || ||| ||| ||| ||| | || |||| ||| || |||||||||||| Sbjct 806 TCAAACTTTTCTTTGCCAAAATTATACAGCACAACACCAACATTTCCTCTATAATCTTCA 865 Query 37528 TCGATTACTCCGCCTCCTACATCAATA---CCTTTTAGAGACAAACCCGATCTAGGAGCT 37584 || || || || |||||||||||||| |||| || ||| || || | |||||| Sbjct 866 TCTATGACACCAGCTCCTACATCAATAAAGTGTTTTGCAGCCAAGCCAGACCGTGGAGCT 925 Query 37585 ATTCTTCCATAACAAAATTTGGGCATAGACATCCGAATATCTGTTTTAATCAATTGTCTT 37644 | |||| ||||||| || | ||| | || |||||||| | ||| || || Sbjct 926 ACTCTTTCATAACACCCAGAAGGAAGCACTATCTGTATGTCTGTTTTCA-CAAGAGT-TT 983 Query 37645 TCTCC--AGGAAGGATGGTATAATCGTACGCGCTATATAAATCATATCCCGCGGC 37697 ||||| ||| |||| || ||||| || || || || | || || |||||||| Sbjct 984 TCTCCATAGGTGGGATTGTGTAATCATAGGCACTGTACAGGTCGTAGCCCGCGGC 1038 >seq3 Length=58292249 Score = 87.8 bits (96), Expect = 2e-12 Identities = 208/310 (67%), Gaps = 7/310 (2%) Strand=Plus/Plus Query 37392 AGATTGTACTTCATTCAGATCAGGATAATATATACGTTGATAGATTAGCTGAGCTATTCT 37451 || ||| ||||| | | || || ||| | || |||| | | || || || || |||| Sbjct 29419078 AGCTTGAACTTCTTCTATTTCTGGGTAAAAAATCCGTTCACAAATGAGTTGTGCAATTCG 29419137 Query 37452 ATCGCCCGTATTTATTTTAAAATTACATTTTCCATTATTTATCAGAATGACTCCAATATT 37511 ||| | | || | || ||| || ||| ||| ||| | ||| || |||| || Sbjct 29419138 ATCATCTTTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAACAGTGCAACACCAACGTT 29419197 Query 37512 CCCCCTATAATCTTCATCGATTACTCCGCCTCCTACATCAATA---CCTTTTAGAGACAA 37568 || |||||||||||||| || || || |||||||||||||| |||| || ||| Sbjct 29419198 TCCTCTATAATCTTCATCTATGACACCAGCTCCTACATCAATAAAGTGTTTTTCAGCCAA 29419257 Query 37569 ACCCGATCTAGGAGCTATTCTTCCATAACAAAATTTGGGCATAGACATCCGAATATCTGT 37628 || || | |||||||| |||||| ||||| || | | ||| | || ||||| Sbjct 29419258 GCCAGACCGAGGAGCTACTCTTCCGTAACACCCAGAAGGAAGCGCTATCTGTATGTCTGT 29419317 Query 37629 TTTAATCAATTGTCTTTCTCC--AGGAAGGATGGTATAATCGTACGCGCTATATAAATCA 37686 ||| | ||| | | |||||| ||| |||| || ||||| || || || || | || Sbjct 29419318 TTTCA-CAAGAG-CCTTCTCCATAGGTGGGATTGTGTAATCATAGGCACTGTACAGGTCG 29419375 Query 37687 TATCCCGCGG 37696 || |||| || Sbjct 29419376 TAGCCCGTGG 29419385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686885737037040